Apodemus sylvaticus (European woodmouse): 127689179
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Entry
127689179 CDS
T10613
Symbol
Vps11
Name
(RefSeq) vacuolar protein sorting-associated protein 11 homolog isoform X1
KO
K20179
vacuolar protein sorting-associated protein 11
Organism
asyl Apodemus sylvaticus (European woodmouse)
Pathway
asyl04140
Autophagy - animal
asyl04148
Efferocytosis
asyl05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
asyl00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
127689179 (Vps11)
04148 Efferocytosis
127689179 (Vps11)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
127689179 (Vps11)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
asyl04131
]
127689179 (Vps11)
Membrane trafficking [BR:
asyl04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
127689179 (Vps11)
Hops complex
127689179 (Vps11)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PEP5_VPS11_N
TPR_PEP5_VPS11
VPS11_N
VPS11_C
Clathrin
zf-C3HC4_2
zf-RING_2
zf-C3HC4
zf-rbx1
TPR_GEMI5
Beta-prop_WDR3_1st
zf-C3H2C3
zf-RING_UBOX
Beta-prop_WDR36-Utp21_1st
zf-RING_5
DUF1993
zf-RING_11
zf-HC5HC2H
zf-ANAPC11
zf-C3HC4_3
zf_RING_Vps8_fungal
zf-RING-like
DLP_helical
DUF5847
Motif
Other DBs
NCBI-GeneID:
127689179
NCBI-ProteinID:
XP_052044506
LinkDB
All DBs
Position
7:84860751..84875920
Genome browser
AA seq
941 aa
AA seq
DB search
MAAYLQWRRFVFFEKELVKEPLGNDGTAPGAAPVSGSTASKFLCLPPGITVCDSGRGSLV
FGDMEGQIWFLPRSLQLTGFQAYKLRVTHLYQLKQHNILASVGEDEEGINPLVKIWNLEK
RDGGNPLCTRIFPAIPGTEPTVVSCLAVHENLSFMAIGFTDGSVTLNKGDITRDRHSKTQ
ILHKGNYPVTGLAFRQAGKTTHLFVVTTENVQSYIVSGKDYPRVELDTHGCGLRCSALSD
PSQDLQFIVAGDECVYLYQPDERGPCFAFEGHKLIAHWFRGYLVIVSRDRKVSPKSEFTS
RDSQNSDKQILNIYDLCNKFIAYSAVFEDVVDVLAEWGSLYVLTRDGRVHALQEKDTQTK
LEMLFKKNLFEMAINLAKSQHLDSDGLAQIFMQYGDHLYSKGNHDGAVQQYIRTIGKLEP
SYVIRKFLDAQRIHNLTAYLQTLHRQSLANADHTTLLLNCYTKLKDSSKLEEFIKTKSES
EVHFDVETAIKVLRQAGYYSHALYLAENHAHHEWYLKIQLEDIKNYQEALRYIGKLPFEQ
AESNMKRYGKILMHHIPEQTTQLLKGLCTDYRPSLEGRGDREAPSCRANSEEFIPIFANN
PRELKAFLEHMSEVQPDSPQGIYDTLLELRLQNWAHEKDPQAKEKLHAEAISLLKSGRFC
DVFDKALVLCQMHDFQDGVLYLYEQGKLFQQIMHYHMQHEQYRQVIAVCERHGEQEPSLW
EQALSYFARKEEDCKEYVAAVLRHIENKSLMPPLLVVQTLAHNSTATLSIIRDYLVQKLQ
KQSQQIAQDELRVRRYREETTRIRQEIQELKASPKIFQKTKCSICNSALELPSVHFLCGH
SFHQHCFESYSESDADCPTCLPENRKVMDMIRAQEQKRDLHDQFQHQLKCSNDSFSVIAD
YFGRGVFNKLTLLTDPPAARLTPSLDTGLQRDLLMHSRRGT
NT seq
2826 nt
NT seq
+upstream
nt +downstream
nt
atggcggcctacctgcagtggcggcgattcgttttctttgagaaggagcttgtgaaggag
ccgctgggtaacgatggtaccgctcccggtgccgcgccggtgtcgggatccactgcttcc
aagttcctttgcctccctcctggcatcactgtctgcgactcaggccgcgggagcctggtt
tttggagatatggaaggccagatctggtttttgccacgttctctacagcttacagggttc
caagcctacaaactgcgggtgacacatttatatcagctgaagcagcacaatattctggca
tcggttggtgaggacgaagagggtattaatcctctggtaaagatctggaacctggaaaag
agagatggcggcaatccactctgcacccggattttccctgccatcccggggacagagccg
actgttgtgtcatgtttagcagtccatgagaacctcagcttcatggccattggtttcact
gatggcagtgttactctgaacaagggagatattacccgggaccggcacagcaagacccag
attttgcacaagggcaactatcctgttactggactggcctttcgccaagcaggaaagacc
actcacttgtttgtcgtgacaactgaaaatgttcagtcctatatagtgtctggaaaggac
taccctcgcgtggagttggacacccatggttgtggcctgcgctgttcagccctgagcgac
ccttctcaggacctgcagttcattgttgctggagatgagtgtgtctacctttaccagcca
gatgaacgtgggccctgctttgccttcgagggccataagctcatcgcccactggtttcga
ggctaccttgtcattgtctcccgtgaccggaaggtttctcccaagtcagagtttaccagc
agggactcacagaactctgacaagcaaattctcaacatctatgacctgtgcaacaagttc
atagcctacagcgctgtttttgaggatgtagtggatgtgctcgctgagtggggctccctg
tacgtgctgacgcgggatgggcgggtccacgcattgcaggagaaggacacacagaccaaa
ctggagatgctatttaagaagaatctatttgagatggcaattaacctggctaagagtcaa
catctggacagtgatgggttggctcaaatcttcatgcagtatggagaccatctctacagc
aagggcaaccacgatggggctgttcagcagtatatccgaaccattggaaagttggagcca
tcctatgtgatccgtaagtttctggatgcccagcgcatccacaacttgactgcctaccta
caaaccctgcatcggcaatctctggctaatgctgatcataccaccctgcttctgaactgc
tataccaagctcaaggacagctccaagttggaagagttcatcaagacaaagagcgagagt
gaagtccattttgacgtggagacagccatcaaggtcctccggcaggctggctactactcc
catgccctctatctggctgagaatcatgcacaccatgagtggtacttgaagatccagcta
gaggacatcaagaactatcaggaagctctccggtatatcgggaagctgcctttcgagcag
gctgagagtaacatgaaacgctatggcaagatcctcatgcaccacataccggagcagacc
acccagctgctcaaaggcctctgtaccgactatcggcccagtctggaaggccgaggcgat
cgggaggctccgagctgccgggccaactctgaagagttcatccccatctttgcaaacaac
ccaagagagttgaaagccttcctggagcacatgagtgaagtgcagccagactcgccgcag
ggcatctatgatacgctcttggagctgcggctgcagaactgggcccatgagaaggatcca
caggccaaggagaaacttcatgcagaggccatttccctgctgaagagtggccgattctgt
gacgtgtttgacaaggcattggtcctgtgccagatgcatgacttccaggatggggtcctt
tacctctatgagcaggggaagctgttccagcagatcatgcattaccacatgcagcatgag
cagtaccggcaggtgattgccgtgtgtgagcgccatggggagcaggagccctccctgtgg
gagcaggccctcagctacttcgcccgcaaggaggaagactgcaaggagtatgtggcagct
gtgctcaggcacatcgagaacaagagccttatgccgcctcttctagtggtacagaccctg
gcccacaactccacagctaccctgtccatcatccgagactacctggtccaaaaactgcag
aaacagagccagcagattgcacaggatgagcttcgggtgcgacggtacagagaggagacc
actcgcatccgccaggaaatccaagagctcaaggcgagcccaaagattttccagaagacc
aagtgcagcatctgcaacagtgctttggagctgccttcagtccacttcctgtgtggccac
tccttccaccagcactgctttgagagttactcagaaagtgatgctgactgccccacctgc
ctccctgaaaaccggaaggtgatggatatgatccgggcccaggagcagaaacgagatctc
catgatcagttccaacatcagctcaagtgctcgaatgacagcttctctgtgattgcggac
tactttggcagaggggttttcaacaagttgactctgctgaccgaccctcctgcagccaga
ctgacccccagcctggacactggactgcagcgggacctgctgatgcactccaggagggga
acttaa
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integrated database retrieval system
