Apodemus sylvaticus (European woodmouse): 127689198
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Entry
127689198 CDS
T10613
Symbol
Arhgef12
Name
(RefSeq) rho guanine nucleotide exchange factor 12 isoform X1
KO
K07532
Rho guanine nucleotide exchange factor 12
Organism
asyl Apodemus sylvaticus (European woodmouse)
Pathway
asyl04270
Vascular smooth muscle contraction
asyl04360
Axon guidance
asyl04611
Platelet activation
asyl04625
C-type lectin receptor signaling pathway
asyl04810
Regulation of actin cytoskeleton
asyl05135
Yersinia infection
asyl05152
Tuberculosis
asyl05163
Human cytomegalovirus infection
asyl05200
Pathways in cancer
asyl05205
Proteoglycans in cancer
Brite
KEGG Orthology (KO) [BR:
asyl00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
127689198 (Arhgef12)
09150 Organismal Systems
09151 Immune system
04611 Platelet activation
127689198 (Arhgef12)
04625 C-type lectin receptor signaling pathway
127689198 (Arhgef12)
09153 Circulatory system
04270 Vascular smooth muscle contraction
127689198 (Arhgef12)
09158 Development and regeneration
04360 Axon guidance
127689198 (Arhgef12)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
127689198 (Arhgef12)
05205 Proteoglycans in cancer
127689198 (Arhgef12)
09172 Infectious disease: viral
05163 Human cytomegalovirus infection
127689198 (Arhgef12)
09171 Infectious disease: bacterial
05135 Yersinia infection
127689198 (Arhgef12)
05152 Tuberculosis
127689198 (Arhgef12)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
asyl04131
]
127689198 (Arhgef12)
Membrane trafficking [BR:
asyl04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
127689198 (Arhgef12)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RGS-like
PH_16
RhoGEF
PDZ
PDZ_6
PDZ_2
SOS1_NGEF_PH
Pept_S41_N_bact
AAA_23
Motif
Other DBs
NCBI-GeneID:
127689198
NCBI-ProteinID:
XP_052044558
LinkDB
All DBs
Position
7
Genome browser
AA seq
1546 aa
AA seq
DB search
MSGTQSTITDRFPLKKPIRHGSILNRESPTDKKQKVERSSSHDFDPTDSSSKKTKSSSEE
SRSEIYGLVQRCVIIQKDDNGFGLTVSGDNPVFVQSVKEDGAAMRAGVQTGDRIIKVNGT
LVTHSNHLEVVKLIRSGSYVALTVQGRPPGSPQIPLADSEVEPSVTGHMSPIMASPHSPG
AAGNMERITSPVLMGEENNVVHNQKVEILRKMLQKEQERLQLLQEDYNRTATQRLFKEIQ
EAKKHIPQLQEQLSKATGSTQDGAVIAPSRPVGDALTLSETETDPGDGLCRTDWSSGDAS
RPSSDSADSPKSSLKERIYLEETPERSDAALDAETQSLVGSPSTRGAPHIIGAEDDDFGT
EHEQINGQCSCFQSIELLKSRPAHLAVFLHHVVSQFDPAALLCYLYSDLYKQTNSKETRR
VFLEFHQFFLDRSAHLKVSVPEEISVDLEKRRPELIPEDLHRHYIQTMQERVHPEVQRHL
EDFRQKRSMGLTLAESELTKLDAERDKDRGTLEKERACAEQIVTKIEEVLMTAQAVEEER
SSTMQYAILMYMKHLGVKVKEPRNLEHKRGRIGFLPKIKQSMKKDREGEEKGKRRGFPSI
LGPPRRPSRHDNSAIGRAMEIQKLRHPKHLSAPSSVSPEPQDPAKLRQSGVATEGTDTGY
PSTSSMSSATSGAALSQEGGRENDTGAKPVGEALAPGDCADSTPRMPSTAFDFPPPLLDQ
VQEEECEVERVAEHGTPKPFRKFDSIAFGESQSEDEQFENDLETDPPNWQQLVSREVLLG
LKPSEIKRQEVINELFYTERAHVRTLKVLDQVFYQRVSREGILSPSELRKIFSNLEDILQ
LHVGLNEQMKAVRKRNETSVIDHIGEDLLIWFSGPGEEKLKHAAATFCSNQPFALEMIKS
RQKKDSRFQTFVQDAESNPLCRRLQLKDIIPTQMQRLTKYPLLLDNIAKYTEWPPEREKV
KKAADHCRQILNYVNQAVREAENKQRLEDYQRRLDTSNLKLSEYPNVDELRNLDLTKRKM
IHEGPLVWKVNRDKSIDLYTLLLEDILVLLQKQDDRLVLRCHSKILASTADSKHTFSPVI
KLSTVLVRQVATDNKALFVISMSDNGAQIYELVAQTVSEKTVWQDLICRMAASVKEQSTK
PIPLPQPPPCEGDNDEEEPAKLKAEHHDLSVAGLQSPDRVLGLESPLISSKPQSHSLNTP
GKSEAEHLFVTATQFAKEQHANGTLKEGDGGYPVTIPGPHLPVSEERWALDALRNLSLLK
QLLVQQLGLAEKSTQEDWQSFSRYGPTAEEVQAASGLRDLENVKACHAGEGQVSFKTGTG
DIATCDSPRTSTESCAAQDSVILASQDCQASNIVVMDHMILAPEMPPAEPEGGLDDSGEH
FFDAREAHSDDNPSEGDGAVKKEEKDVNLRISGNCLILDGYDAVQESSTDEEVASSFTLQ
PVTGIPSVDSSRQQQSSPQNAPSRSEGAVSPFTSEFLVQRRWRAMEDACFEIQSPSPCTD
SQSQILEYIHKIEADLEHLKKVEESYALLCQRLAGSALPDRLSDKS
NT seq
4641 nt
NT seq
+upstream
nt +downstream
nt
atgagtggcacacagtctactatcacggacaggtttccccttaaaaaacctataaggcat
ggaagtattttgaaccgagagtcaccaacagataagaaacagaaagtcgaacgcagttca
tcacatgattttgaccccacagatagctcctccaagaagacaaaatctagttcagaggag
agtagatccgagatctatggtcttgttcaacgctgtgtgatcatccagaaagatgacaat
ggattcgggctgacagtcagtggagacaatccagtcttcgtacaatctgtcaaagaagat
ggagcagccatgcgtgctggagtacaaacaggtgatcgaatcatcaaggtgaatggtact
ctggtgactcattcaaatcatctggaggtggtgaaactaatcagatctggttcctatgta
gctctcactgtccagggacgcccacctgggtcgccccagatcccacttgctgattctgaa
gtagaaccgtcagtcactggacatatgtctcccatcatggcgtcccctcattcccctgga
gcagccgggaatatggagagaatcacgagtcctgtgctcatgggggaggaaaacaatgtg
gtccataaccagaaagtagagattctgagaaaaatgttacagaaggaacaggaacggctg
cagttactgcaggaagattataaccgaacggctacccaaagattgttcaaggagatccag
gaggccaagaagcacatcccgcagctgcaggagcagctgtccaaagccaccggctccacc
caggatggagcagtaattgcaccctccaggcctgtaggtgacgccctaacactgagcgag
acagaaacagatcctggagatggcctttgcaggactgactggagcagtggagatgcttct
cggcccagtagtgacagtgcagatagtcccaagagtagcctgaaagaaaggatatatctc
gaggaaaccccagagaggagtgacgctgctctggacgctgagacacagtcactggtcggc
agtccctccacccggggcgcccctcacatcatcggtgccgaggatgatgactttggtact
gaacatgagcagatcaatggacagtgcagctgtttccagagtattgagctgttgaagtcc
cgccctgctcacctggctgtgttcctacaccatgtggtctcacagtttgaccctgcagca
ttgctgtgttatctctattcagacctgtataagcagacaaactccaaggagactcggcgg
gtcttcctggagtttcatcagtttttcttggaccgatctgcacatctgaaagtttctgtc
cctgaggagatctccgtggatctagaaaagagaagacctgagctcattcccgaggatctg
catcgccactacatccagacaatgcaggagagagtccaccctgaagttcagaggcacttg
gaggattttcgacagaaacgcagcatgggactgaccttggccgagagtgagctgactaaa
cttgatgcagagagagacaaggaccggggaactctggagaaggaacgagcatgtgcggaa
cagatcgttaccaaaattgaagaagtactgatgactgctcaggctgtagaagaagaaagg
agttccacaatgcagtacgcaattctcatgtacatgaagcatttgggagtgaaagtgaaa
gaacctcgaaacttggagcacaagcggggtcggatcggcttccttccaaagatcaagcaa
agcatgaagaaagacagagagggcgaggagaaagggaagcgaagaggattccccagcatc
ttgggacccccaagaagaccaagccgccatgacaacagtgcaattggcagggccatggag
atacagaagctacgccacccgaagcacttatccgcaccctcgtcggtgagtcctgagcct
caggaccctgccaagctgcgccagagtggagtagccactgaaggaacagacactggatac
ccgtccaccagttccatgtcttctgccacctcaggggctgctctttcccaagagggaggg
agagagaatgatacaggagcaaaaccagtgggagaagcgctggcgcctggagactgcgca
gacagcacccctcgcatgcccagtactgcttttgacttccctcctcctctgttagatcaa
gtgcaggaggaggagtgcgaagtagagagggtggcagaacatggaaccccaaaacccttt
cggaagtttgacagcattgcctttggagaaagtcagagtgaggatgagcagtttgaaaat
gacctggaaacagatccacccaactggcagcagctcgttagtagagaagtgttactggga
ctgaaaccttctgaaatcaaaagacaggaagtgattaatgaactgttctacactgagaga
gctcatgtccgaacactgaaggttcttgaccaagtattctatcagcgagtgtccagagaa
gggattctatcaccttcagaactacgcaagattttttcaaacttggaagatatccttcaa
cttcatgttgggttgaatgaacaaatgaaagctgtccggaaaaggaatgagacttctgtt
attgatcatattggagaagatctgctcatctggttcagcggaccaggggaggagaagctg
aaacacgctgcggccacgttctgcagtaaccagcctttcgccctggagatgatcaagtct
cgccagaaaaaggattctcggttccagacttttgtgcaagatgctgagagcaatcccctg
tgccgtcgtcttcagctgaaggatatcattcccacccaaatgcagaggctcaccaagtac
ccgcttcttttggataatattgccaaatacacagaatggcctccagaaagggaaaaggtg
aagaaggctgcagatcactgtcgtcagatcttaaattatgtaaatcaggctgtcagggag
gcagaaaataagcagcgcttagaagactatcagcgtcgccttgacacctccaatctcaag
ctgtcagaatacccaaatgttgacgagctcaggaatttggatttaacaaaaagaaagatg
attcacgaagggccgttggtctggaaggtgaatagagataaaagcatcgatctttataca
ctgctgctggaagacattcttgtgctgttacaaaagcaggatgacaggctggtgctcagg
tgccacagcaagattctggcctccacggccgacagcaaacacaccttcagccccgtcatc
aagctgagcacagtgctggttcgacaggtggcaacagataacaaagctttattcgtcatt
tccatgtcagataatggagcccaaatttatgaattggtagcacagacggtttctgaaaag
acggtctggcaagacctcatctgccgaatggctgcgtcagtgaaggagcagtccaccaag
ccgattcccctcccccagccgccaccttgcgaaggagacaatgatgaagaagaaccagcc
aagttaaaagcggagcaccatgatctttcagtcgctggtctgcagagtccagacagagtt
ttgggattagaatctcccttaatttcgtcaaaacctcagtctcattcactgaatacccct
ggcaaatcagaggcagaacatctctttgtgacggcaacacagtttgcaaaggaacagcat
gcaaatgggacactcaaggaaggtgatggcggctatccggtcacaatcccaggtccacac
ttgcctgtgtcagaggagcggtgggcattggacgcactgagaaatttgagcttgttgaag
cagttgctggtccagcagttaggtcttgccgagaagagcactcaggaagactggcagtcc
ttctcaagatacgggccaactgctgaggaggtgcaggcagccagtggcctccgggacttg
gaaaatgttaaggcttgtcatgccggggaaggacaggtgtcttttaaaactggaactggt
gacattgcaacttgtgacagtccacggacttcaactgagtcttgtgctgcacaggattca
gtgatactggcatcccaagactgccaggcaagtaacattgtagtaatggaccacatgatc
ctggccccagagatgcctcctgcagagccagaagggggtctggatgacagtggagagcac
ttttttgatgcccgtgaagcacatagtgatgataatccatcagaaggtgatggagcagtt
aaaaaggaagagaaggatgttaacttacgcatctcaggaaactgtttgatccttgatggc
tatgatgccgtgcaggagagctccacagatgaggaggttgcctcctcattcaccctgcag
cctgtgacaggcatcccctctgtggactccagccgccagcagcaatcttcccctcagaat
gctccttcccgttccgagggggcagtttcaccattcacatcagagttcctggtccagcga
cgctggagagctatggaggatgcttgttttgagatccagagtccctctccttgtacagat
tcacaaagccaaatcctggagtacattcataaaatagaggctgacctggaacacttaaag
aaggtggaggaaagttacgctcttctttgccaaaggctggctggctcggccctccccgac
aggctgtcagataaaagttag
DBGET
integrated database retrieval system
