Apodemus sylvaticus (European woodmouse): 127689255
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Entry
127689255 CDS
T10613
Symbol
Vps13a
Name
(RefSeq) intermembrane lipid transfer protein VPS13A isoform X1
KO
K19525
vacuolar protein sorting-associated protein 13A/C
Organism
asyl Apodemus sylvaticus (European woodmouse)
Brite
Membrane trafficking [BR:
asyl04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
127689255 (Vps13a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
127689255
NCBI-ProteinID:
XP_052044688
LinkDB
All DBs
Position
1:45869990..46042789
Genome browser
AA seq
3165 aa
AA seq
DB search
MVFESVVVDVLNRFLGDYVVNLDESQLSLGIWKGAVALKNLVIKENALHELDVPFKVKVG
HIGSLKLKIPWKNLYTQPVEAVLEDIYLLIVPSSRIEYDPIKEEKQLMEAKQRELKRIEE
AKQKVVDQEKPQEEKQDTFTEKLITQIIKNLQVQISNIHVRYEDDITNQDKPLSFGISLQ
NISLQTTDQYWIPCLHDDTEKLVRKLIRLDNLFAYWNVNSRMFYLNDYDESLEVLKNGIV
HENIVPEGYDFVFRPISANAKLQMNRRSDFDFSDPKISLVIELHTIAIEFNKPQYFSLME
LLESIDMMTQNLPYRKFKPSVPLHLHAKEWWAYAIHGILEVNVGPSLRMWSWEHIRNHRS
NMKRYREFYKKKLTSKKPSPEILMFLEELEKTLDVFNITIARQQAEVEVKKAGYKIYKEG
VKDPEDNAGWFSWMWTWSESNANQQQDVKPGILEEMLTPEEKSLLYEAIGYSETAVDPTL
PKTFEALKFFVHLKSMSIVLRENRQKPELLNVVVEGLSTSIVQRPGARAIKFVTKIDSFH
ITGLPDDFKKPHLLTSLDDMSLFQITFETNPLDETVAQRCTIEAEPLEIIYDARTVNSIV
EFFRPPKDVYLAQLTSATLTKLEEFREKTATGLLYVIETQKVLDLRINLKASYVIVPQYG
NFSPTSNLLLLDLGHLKVTSKRRSGLPDMKPSEASLEDIMHRAYDSFDIQLTSIQLLYSR
VGDNWKEARKLNVSTQHILIPMHVNVELSKAMVFMDIKMPKFKISGKLPLVSLRISDKKL
QGIMELLGSIPKPEPVTDVSAPARSFQIQASTLPVSHISQKLIPLLEQPEDDSEEEFFDA
PCSPLEEYPQVSCRVKSTRQKKLQKKDCSLNFIRLRMRFEVAEVLIQFYHLVGDCELPVL
EMGVLGLGTEAEIRTFDLKGNAFLKELWLKCPEYLDENKKPVYLITTLDNTMEDLLTLEF
MRVEKNAPNLNSIYNNVLQLLKVNFSSLDIHLHTEALLNTMNYLHNILPELGEKSASLSA
AEPEDKGDIIKKLALKLPTNEDIITLQLLAELSCLRIFIQDQKENISEIKIEGLDSEMIM
KPLATEITAKLRNIIVLDSDKMAIYKKALYITGKEVFSFKMISYMDATAGYAYTDMSVVD
VRVYLTVGCIEVVFITKFLYSILEFINNFQAVKDALAEATVQAAEMAADGVKELARRSSR
FALDVNIKAPVVLIPQSPVSRNVFVADFGLITMKNIFVTVTDTQSNIPPVIDLITIKLSK
MRLYRSQFINDTYQEVLDLLLPLNLEVIVERNLSWEWYKEVPCFNIKAQLKPMEFILSQE
DLTTVFKTLHGNIWYGRNIKASSSVNKDPETVASGVTSTSYHSAATTMTAAVVEVHPQAS
QVNTTLNVSFRTDYLTMTLYSPGPDQDSFTDVRDPSLELAEFKLENIISSLKIYTDGSTV
FSFSLKNCILDDKRSHVMKATPRMIGLTVGFDKKDMVDVKYRKVRDVVVMDTIVQEMYVC
ASVEFLMTVAHVFFDAYVTSTALETSVQTRTTREAPAHESGKWEMNILIKNPEIVFVADM
TRNDAPSLVITTQCEICYKSEPANNTMTAAIKDLQVRACPFLPVKRKGKVTTVLQPCDLF
YQATQLGTDPQMIDISVKSLTLKVSPVIINTIITITSALYTTKETVPEENTSNIAHLWDQ
KDTKNLKMWFLEESNETEKVVPTNEVMPGGETLNLHIDSIFIVLEAGIGHRTVPMLLAKS
CFSGESKNWRTLINLHCQLELEVHYYNEMFGVWEPLLEPLEIDQTDDFRPWNLGIKMKKK
AKEAIVESDSEEENYKVPEYKTAISFYSKDQLNITLSKCGLVMLNNLVEAFTEAATGSSA
VFLRDLAPFMILNSLGLTVSVSPSDSFNVLNVPLAKSYELKNDESLSMDYVRTKDNDHFN
AMTSLSSKLFFILLTPANHSVADKIPLTKVGRRLYTVRHRESGVERSIICQIDTVEGSKK
VTIRSPVQIKNHFSIPISVFEGDSLLGTASPENEFNIPLASYRSSLSLKPEDEDYQLCEG
IDFEEIIKYDGQLLKKKCRSISPSKKSFVINIVPEKDSLTSLSVYSEDGWDLPYVMHLWP
PILIRNLLPYKIAYYIEGIENTVFTLSEGHSSQICNVEMDQAKLHLKLLDYLNHDWKSEF
QIKPNQQDINFINFTCLTEMEKSDLDIAIHMTYNTGQTVVAFHSPYWMVNKTNRMLQYKA
DGIHRKHPPNYKKPVLFSFQPNHFFNNNKVQLMVTDSELSDQFSIDTVGSHGAIKCKGLK
MEYQVGVTIDLSSFNITRIVTFIPFYMIKNKSKYHISVAEEGSDKWLSLDLEQCVPFWPE
KASNILLVQVERSEGSPKRIYFNKQDSCILLRLNNELGGIIAEVNLAEHSTVITFSDYHD
GAATFLLINHTKSDPVQYNQSSLSEIEDSLPPGKAVYYTWADPVGSRKLKWSCGQSYGEV
THKDDMMTPISVGKKTIYLVSFFEGLQRIILFTEDPRVFKVTYESEKAELAELEVVLALQ
DVGISLVNNYTKQEVAYIGITSSDVVWETKPKKKSRWKPMSVKHTEKLEKEFREYTESSP
LEDKVVELDNSIPVRLTPSGNDMKILQPHVIAVRRNYLPALKVEYNTSAHQSSFRIQIYR
IQIQNQIHGAIFPFVFYPIKPPRSVTMDSAPKPFTDVSIVMRSAGHSQISRIKYFKVLIQ
EMDLRLDLGFVYALADLVPKAEVTEKTEVEYFHKDVEAFEQEYEVVSSVDQSQVNLFEYF
HISPIKLHLSVSLSSGREEANDSEQHGGLIPVHSLNLLLKSIGATLTDVQDVVFKLAFFE
LNYQFHTTSELQSEVIRHYSKQAIKQMYVLILGLDVLGNPFGLIREFSEGVEAFFYEPYQ
GAIQGPEEFVEGMALGLKALVGGAVGGLAGAASKITSAMAKGVAAMTMDEDYQQKRREAM
NKQPAGLREGITRGGKGLVSGFVSGITGIVTKPIKGAQKEGAAGFFKGVGKGLVGAVARP
TGGIIDMASSTFQGIKRATETSEVESLRPPRFFNEDGVIRPYRLRDGTGNQMLQVMENGR
FAKYKYFTHVMINKTDMFMITRRGVLFVTKGTFGQLTCEWQYTFDEFTKEPFIVHGRRLR
IEAKERVKSVFHAKEFGKIINFKTPEDARWILTKLEEAREPSPRL
NT seq
9498 nt
NT seq
+upstream
nt +downstream
nt
atggtattcgagtcggtggtcgtggacgtgttgaaccggttcctgggagactatgtggtg
aacctggacgagtcccagctctccctgggcatttggaaaggagctgtggccctcaagaac
cttgtaattaaagaaaatgcattgcatgaattggatgtaccattcaaagttaaagttggc
catataggtagtctgaaacttaaaattccatggaaaaacctttatactcaaccagttgaa
gctgttttggaagatatttatttactcatagtgccttcttctagaatagagtatgatcct
atcaaagaagaaaagcaactcatggaagcaaaacaaagggaactaaaaagaatagaagaa
gcaaaacagaaagtagttgatcaagaaaaacctcaggaggaaaaacaggacacttttaca
gaaaagttaattactcaaatcataaagaaccttcaagtgcaaatttccaatatccatgtt
cgttatgaagatgatatcacaaatcaagacaaaccactctcttttggtatttcccttcaa
aatatcagccttcagacaactgatcaatattggattccatgtttacatgatgatactgaa
aaactagttcggaagctaatccgattagataatctctttgcttactggaatgtgaactcc
cggatgttttatttgaatgattatgatgaatcattggaagtcttgaaaaatggtattgtc
catgaaaatattgttccagaaggttatgattttgtttttcgacctatatctgctaatgcc
aaacttcagatgaatcgacgctcagattttgacttttctgaccccaaaataagcctggtt
attgagttacataccatagcaattgagtttaataaaccacagtatttcagtctcatggaa
ctgctcgagtcaattgacatgatgacacaaaacctgccatacagaaagttcaagcccagc
gtgcctctccacctccatgccaaagagtggtgggcctatgctatacatggtattcttgaa
gtaaatgttggtcccagtttacggatgtggtcatgggagcatattagaaaccatagatcc
aacatgaaacgatacagagaattttataagaaaaagttaacaagtaagaagccatctcct
gaaattctcatgtttttggaggagttggagaaaaccttggatgtctttaatataaccata
gctagacaacaggcagaagttgaggtaaagaaagctggatataagatttacaaagaagga
gtaaaagatccagaagataatgcaggatggtttagctggatgtggacttggtcagaatca
aatgctaatcaacaacaagatgttaaacctggaattcttgaagaaatgttgacacctgaa
gaaaaatcattactttatgaagcaattggttatagtgaaacagccgttgatccaaccttg
ccaaaaacatttgaagccttgaagttttttgttcacttgaaaagtatgtctattgttcta
agagaaaatcgccaaaagccggagctgttaaacgttgtagtagaaggacttagtacttcc
attgtgcaaagaccaggagcacgagccataaaatttgtaaccaaaattgattcatttcat
attactggcttaccagatgatttcaaaaaacctcacctactgacttccttggatgatatg
tcactcttccagattacatttgagacaaatcctttagatgaaactgttgctcagaggtgc
accatagaggccgagcctctagagataatatatgatgcaaggacagtcaatagtatagtg
gagttcttcagaccaccgaaagatgtctacctagcccaactcacttcagctactttgaca
aaacttgaagaatttcgagaaaaaacggcaacaggtttgctgtatgttattgaaacacag
aaagttcttgatctcagaattaatttaaaggcttcatatgttattgtcccacaatatgga
aattttagccctacttcaaatctacttctcttggatcttggtcatttaaaggtgacaagt
aaacgtcgatcaggattgccagatatgaaacccagtgaggccagccttgaagatataatg
cacagagcatatgactcttttgatattcagcttacaagcatacagctgctctacagtaga
gtgggtgataattggaaagaagcacgaaagctcaatgtatctacacagcatattttgata
cctatgcatgtcaatgtagaactctctaaagctatggttttcatggatatcaagatgccc
aaattcaagatttctggaaagttacctcttgtttcattacgaatctcggataaaaaactg
caaggcattatggaattgttgggaagcattccaaaacctgaacccgtaactgatgtatct
gcccctgccagatcattccagattcaagcatccactttgccagtatcacacatttctcag
aagttaatccctttattggaacagcctgaagatgactcagaggaggaattttttgatgca
ccttgtagtcccttggaagagtatcctcaagtgtcatgtagagtcaaaagtactcgacag
aaaaaattacaaaagaaagattgttcattgaattttattcgacttagaatgagatttgaa
gtagcagaggtgttgattcaattttatcaccttgtaggagactgtgaactccctgtgcta
gaaatgggtgttttaggattgggaacagaagctgagattagaacatttgacttgaaagga
aatgcctttttgaaagaattatggttaaaatgtccagaatatttagatgaaaacaaaaaa
ccggtttatttgatcacgaccctggataacacaatggaagatttattaacattggaattc
atgagggttgaaaaaaatgcaccaaatttgaatagtatatataacaatgttttacaactt
cttaaggtgaatttttcctctttggatattcatttacacactgaagcacttctgaataca
atgaattatcttcataatattcttccagaattaggggaaaaatctgcctcattgtctgct
gcagagcctgaagataaaggcgatatcattaaaaaacttgctttaaagctacccacgaat
gaagatattattaccttgcagcttttggcagaattatcttgtttacggatttttattcag
gatcagaaagaaaacatttctgaaattaagattgaagggcttgattctgagatgattatg
aagcctttagccactgaaataactgcaaagctaaggaatataattgtgttagattctgat
aaaatggctatctacaaaaaggctctttatatcactggaaaagaagttttcagcttcaaa
atgatttcttacatggatgcaactgctggctacgcatacacagatatgagtgtggttgac
gttcgggtttatttaactgttggttgtattgaagtagtgttcatcacaaaattcctgtat
tctatattggaatttataaataattttcaagcagttaaagatgccttggctgaagcaact
gttcaagcagcagagatggctgctgatggtgtaaaggaactagctcgcaggagctcaagg
tttgcactggatgttaacatcaaggctccagttgtgctcattccacagtctccagtgtct
cggaatgtttttgttgctgattttggattaattacaatgaaaaatatatttgttactgtc
acagatacccagagtaatatcccacctgtaattgatttgataacaataaagttgagtaaa
atgagactatacaggtctcagtttataaatgatacataccaggaagtgctggacttgcta
ctccctttgaacctggaagtgattgttgaacgaaacttatcctgggaatggtacaaggaa
gttccttgttttaatataaaagctcaactaaaacccatggagttcattcttagtcaggaa
gatttaacaactgtctttaaaacattgcatggcaatatatggtatggacgaaatataaaa
gcttcatcatctgtaaataaagacccagagaccgtggctagtggagtcaccagtacttcc
taccactcggcagctactacaatgactgctgctgtggtggaggtacatccacaggcttct
caagttaacacaacactgaatgtgagcttccggactgattatctcaccatgacactctac
agtccagggcctgatcaggactcctttacagatgttcgtgacccttctctagaacttgct
gaatttaaattggagaatattataagtagtttaaaaatatatacagatggttctacagtc
ttctctttctcattaaaaaactgtattttagatgataaaaggtcacatgtcatgaaagct
actcctagaatgataggactgactgttggcttcgacaagaaggacatggtggatgtaaaa
tatagaaaagtcagagatgttgttgtgatggatacaattgtccaagagatgtacgtctgt
gcgagtgtggagttcctgatgactgttgcccatgtcttttttgatgcctatgtgactagt
acggctttagaaaccagtgttcagacacgaactaccagagaagcacctgcacatgaatca
gggaagtgggaaatgaatattcttattaaaaacccagagattgtatttgtggctgacatg
acaagaaatgatgctccttccttagttattacaacacagtgtgaaatttgctacaaaagt
gaacctgcaaacaatacaatgactgctgccattaaagatctccaagtcagagcgtgccca
tttcttccagtcaagagaaagggcaaagtcaccactgttttgcagccttgtgacttgttt
tatcaggctactcagttaggcacagatccacaaatgattgacatatcagtaaaatctctt
acactaaaggtttcaccagttatcataaataccataataactattacttcagcactttac
acaactaaggaaactgtccccgaagaaaacacttctaatatagcacatttatgggaccag
aaggatacaaagaatctaaaaatgtggtttcttgaagaatctaatgaaactgagaaagta
gttcccacaaatgaagtgatgccgggaggggagacactgaacttgcatattgattccatt
tttattgttcttgaggctggaattggccatagaacagtgccgatgctattggcaaagtca
tgcttttcgggagaaagcaaaaactggcggactttaataaatcttcactgtcagcttgaa
ctggaagttcactattataatgaaatgtttggtgtttgggaacctttactagaaccctta
gaaattgatcagactgatgattttagaccttggaatcttggcatcaagatgaaaaagaaa
gcaaaagaggccattgttgagtctgatagtgaagaagaaaactacaaagtaccagaatat
aagactgccataagtttttattctaaagaccaattaaacattactttatccaaatgtggc
cttgtgatgttaaataatttagttgaggcatttactgaagctgctactggatcttcagct
gtcttcctaagagatctagcaccatttatgattttaaattctcttggacttactgtctct
gtttcaccaagtgactcttttaacgtactcaatgttcctttggcaaaatcatatgaactg
aaaaatgatgagagtttgagtatggattatgtacgaactaaggacaatgatcatttcaac
gcaatgaccagcctaagcagcaagctcttcttcatcctcctgacacctgctaaccactct
gttgctgacaagatccctttaacaaaagtgggacgccgtctgtacaccgtaagacacaga
gaatctggggtcgaaagatctatcatctgtcaaattgacacagttgaaggaagtaagaag
gtgacaatccgctcaccagtgcagattaagaatcatttttcaatcccaatttccgttttt
gaaggagatagtttattgggaactgcttcacctgaaaatgaatttaacataccattagca
tcttaccgatcatctctttccttgaagccagaagatgaggactaccaactatgtgaagga
attgactttgaagaaatcataaaatatgatggacagcttctaaagaagaaatgtagatct
ataagcccatctaagaaatcgtttgttattaatattgtcccagaaaaggatagtttgact
tctctgtcagtgtattcagaagatggctgggacttaccatatgtaatgcacttgtggcca
cctatcctcatccggaatcttcttccctacaaaattgcttattacattgagggtattgag
aacactgtttttactctaagcgaaggacattcatcgcagatctgtaatgtagaaatggac
caagccaagctacacttaaaattacttgactatcttaatcatgattggaaaagtgaattt
caaataaaacctaatcaacaagacatcaatttcatcaactttacctgtctcacagaaatg
gaaaagagtgatttggatattgctattcatatgacttacaatactggtcagacagttgtg
gcatttcatagtccatattggatggtcaataaaactaatcggatgttacagtacaaagca
gatggaatccaccgaaaacatccacctaattataaaaaaccagttctcttttcctttcag
ccaaaccacttttttaacaacaataaggttcagctaatggtaactgatagtgagctttct
gatcagttttcaattgatactgttggtagtcatggagccattaaatgcaaaggcctgaaa
atggaataccaagttggtgtcactatagatctcagcagttttaacattaccagaattgtg
acatttattcctttctatatgattaaaaacaaaagcaaataccatatatcagtggcagaa
gaaggaagtgataaatggctttctcttgacttagagcagtgtgtccccttttggcctgag
aaagcctccaatattcttcttgttcaagttgagaggagtgaaggttctccgaaaaggata
tattttaacaagcaagatagttgtattttattgcgactgaataatgagcttggaggtatt
atagcagaagttaatttggctgagcactctacagttattacgttttcagattaccatgat
ggagcagctacattcctattaataaatcacaccaagagtgaccctgttcagtacaaccaa
agttctctcagtgaaatagaagattcccttcctcctggaaaagcagtatattatacttgg
gctgatccagtgggctctagaaagctgaagtggagttgtgggcaaagctatggtgaagtg
acacataaggatgatatgatgacgcccataagtgtagggaaaaaaaccatttatttagtg
tcgttctttgaaggcctgcagcgtattattttattcactgaagatcccagagtgtttaaa
gtaacatatgaaagtgaaaaagccgagttagcagagctggaagttgtgctggcattacag
gatgtcggaatttcacttgtcaataactatacaaagcaagaagtagcctacataggcatt
acaagttctgatgtggtttgggagacaaaaccaaagaaaaaatccaggtggaagccaatg
agtgtgaaacacaccgagaagctggagaaggaattcagggagtacacagagtcttcaccc
ttggaagataaggttgtagagttggacaatagcattccagttcgcttaacacctagtggc
aatgacatgaaaattctgcaaccacatgtgatagctgtccggagaaattacctcccagca
ctaaaagtagaatataacacatctgctcatcagtcatcattcagaattcagatttatagg
atacagatccaaaatcagattcatggtgctatttttcctttcgtgttttatcctattaaa
cctccaaggtctgtcaccatggactcagcaccaaagccatttacagatgtcagtattgtc
atgagatctgcaggacattcccaaatatcacgcattaagtatttcaaagtgctgattcaa
gaaatggatcttagattggatcttgggtttgtttatgccctggcagaccttgtcccaaaa
gcagaggtgactgaaaaaacagaggtggaatattttcataaggatgtagaagcatttgaa
caagaatatgaagtggtttcatcagtagaccaatcacaagtcaatctctttgaatatttt
catatatctcctatcaagttgcatttgagtgtttcactgagttctggaagagaagaagct
aatgattcagaacaacatggaggattaattcctgttcattctttaaatcttttgctgaag
agtattggtgccacccttacagatgtgcaagatgtagtctttaaacttgccttttttgaa
ctcaactaccagttccatacaacatctgaattgcaatctgaagtaataagacactattcc
aaacaggctattaaacaaatgtatgtactcattcttggacttgacgttttgggaaatccc
tttggcttaattagagaattttcagaaggagtagaagcatttttttatgaaccttaccag
ggggccatccaggggcctgaagagtttgtggagggaatggcactaggattgaaagcactg
gttggtggagccgtaggtggactagctggtgccgcctccaaaatcaccagtgctatggct
aaaggggtagcggccatgacaatggatgaagactaccagcagaagagaagagaagcaatg
aataagcagcccgctggccttcgagagggcatcactcgaggaggaaaaggccttgtctct
ggttttgtaagtggcattacagggattgttacaaagccaattaaaggtgctcaaaaggaa
ggagcagctggtttcttcaaaggtgttggaaaaggtttagttggagcagtggcaaggcca
acgggtggcatcatagacatggccagcagtacctttcagggaatcaaaagagctacagag
acttctgaagtagaaagtttgcgacctcccaggttctttaatgaagatggagtcatcaga
ccttacaggttgcgcgatgggacaggaaatcaaatgttacaggtcatggaaaatggaaga
tttgcaaaatacaagtattttacccatgtcatgatcaataaaacagatatgttcatgata
acaagacgtggtgtgttgttcgtgacaaagggaacatttggacagcttacatgtgagtgg
cagtacacttttgatgaatttaccaaagagccattcattgtccatgggagaagattacgc
attgaagcaaaggaacgggtgaaatctgtattccatgccaaggaatttggaaaaataatt
aacttcaagactccagaagatgctaggtggatccttacaaaactggaagaagcaagagaa
ccatccccaagactgtga
DBGET
integrated database retrieval system
