Apodemus sylvaticus (European woodmouse): 127689271
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Entry
127689271 CDS
T10613
Symbol
Nfrkb
Name
(RefSeq) nuclear factor related to kappa-B-binding protein isoform X1
KO
K11671
nuclear factor related to kappa-B-binding protein
Organism
asyl Apodemus sylvaticus (European woodmouse)
Pathway
asyl03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
asyl00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
127689271 (Nfrkb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
asyl03036
]
127689271 (Nfrkb)
Chromosome and associated proteins [BR:
asyl03036
]
Eukaryotic type
Chromatin remodeling factors
INO80 complex
127689271 (Nfrkb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NFRKB_winged
Motif
Other DBs
NCBI-GeneID:
127689271
NCBI-ProteinID:
XP_052044713
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All DBs
Position
7:complement(101772842..101807607)
Genome browser
AA seq
1309 aa
AA seq
DB search
MDSLDHMLTDPLELGPCGDGHSTGIMEDCLLGGTRVSLPEDLLEDPEIFFDVVSLSTWQE
VLSDSQREHLQQFLPQFPPDSGEQRNELILALFSGENFRFGNPLHIAQKLFRDGHFNPEV
VKYRQLCFKSQYKRYLNSQQQYFHRLLKQILASRSDLLEMARRSGPALPFRHKHHSPSRS
PEEREWRTQQRYLKVLREVKEECGDTALSSDEEATLDLQEKFSFEDLSSWLPSSPARSPS
PAVPLRVVPTLSTTDMKTADKIDLGDSDLKLMLKKHHEKRKHQPDHPDLLTGDLTLSDIM
TRVNAGRKGSLAALYDLAVLKKKVKEKEEKKKKKIKLIKSEAEDLAEPLSNTEGLPTLSQ
APSPLAISSIKEEPLEDIKPCLGINEISSSFFSLLLEILLLESQATLPMLEDRVLDWQSS
PASSLNSWFSAAPNWAELVLPALQYLAGESRAVPSSFSPFVEFKEKTQQWKLLGQSQDNE
KELAALFHLWLETKDQAFCKQENEDSSDAMTPVPRVRTDYVVRPSTGEEKRVFQEQERYR
YSQPHKAFTFRMHGFESVVGPVKGVFDKETSLNKAREHSLLRSDRPAYVTILSLVRDAAA
RLPNGEGTRAEICELLKDSQFLAPDVTSTQVNTVVSGALDRLHYEKDPCVKYDIGRKLWI
YLHRDRSEEEFERIHQAQAAAAKARKALQQKPKPPSKTKSSNKEGSMKGLSGPSEQSQMS
LSDSSMPPTPVTPVTPTMPALPTPISPPPVSAVSRSSSTTVSEPAKSSSGVLLVSSPTMP
QLGTMLSPASIQTPPSSQATARVVSHSSSTGLPQVRVVAQPSLPAVPQQSVGPAQPLPQM
SAGPQMRVPVTATQTKVVPQAVMATVPVKGQTAAASVQRPGPGQTGLTVTNLPAAVSPVS
KTAMSSPGNSAPSASTTAVIQNVTGQNIIKQVSITGQLGVKPQTGNSIPLTATNFRIQGK
DVLRLPPSSITTDAKGQTVLRITPDMMATLAKSQVTTVKLTQDLFGAGSGTAGKGISATL
HVTSNPVHAADSPAKAPSASVPSSAPAATTVVKVTPDLKPTETSNSAFRLMPALGVSVAE
QKGKNTVASSEAKPAATIRIVQGLGVMPPKAGQTITVAAHAKQGASVAGGSGAVHSSTVS
LPSINATVSKTVAVASGATSTPISIGTGAPTVRQVPVNTTVVSTSQSGKLPTRITVPLSV
ISQPMKGKSVVTAPIIKGNLGANLSGLGRNIILTTMPAGTKLIAGNKPVSFLTAQQLQQL
QQQGQATQVRIQTVPASHLQQGTASGSSKAVSTVVVTTAPSPKQAPEQQ
NT seq
3930 nt
NT seq
+upstream
nt +downstream
nt
atggattccttggatcatatgctgacagatcccctagaacttggtccttgtggagatggt
cacagtacagggatcatggaggactgcctcctgggcggtaccagggttagtctgcctgaa
gacctgctggaggatcccgagatattctttgacgttgtcagcctctccacatggcaggaa
gtactgagtgactctcagcgagagcatctccagcagtttctgcctcagtttcctccagac
agtggagagcagcgtaacgagctcatcctggccctcttcagtggggagaacttccgcttt
gggaaccctctgcacatcgcccagaagctcttccgagatggacactttaaccctgaggtg
gtcaagtatcgtcagctctgcttcaagtcacagtacaagcggtatctcaactcacaacag
cagtatttccaccggctgctgaaacagattcttgcttccaggagtgatctcttggagatg
gcgcgtaggagtggcccggctcttccctttcgacacaagcaccattcaccatcccgaagc
cctgaggagcgggagtggcggacccagcagcgttacctgaaagtcttgagggaagtgaag
gaggagtgtggtgacactgccctgtcctctgatgaggaggccacgttggatttacaagaa
aaattttcttttgaagatctcagctcatggcttccaagctctccagcacgttctcctagt
cctgcggtgcccctgagggtggtgcccacgctttccaccacggatatgaaaactgcagat
aaaatagacctgggggacagtgacctgaagttaatgttaaagaagcaccatgagaagcgg
aaacatcaaccagatcacccagaccttttgactggggacctgaccctcagtgacatcatg
actcgagtaaatgccggcaggaagggctccctagcagctttatatgatttggctgttctt
aaaaaaaaggtgaaggaaaaggaagagaagaaaaagaagaaaataaagttgattaaatcg
gaggcagaggatctggctgagcccctgagcaatactgaagggctcccaactctctcacag
gccccctctcccctggcaatatcgtctatcaaggaagaacccttggaagacatcaagcct
tgccttggaatcaatgaaatatcttccagttttttctctcttctgttagagatcttgctg
ctggagagtcaggctacccttcctatgctggaggaccgggttttggactggcagtcttct
ccagccagctccctcaacagctggttctctgctgcccccaactgggctgagttggtgtta
cctgctctgcagtatcttgctggagaaagccgagcggttccttccagtttctctccattt
gttgaattcaaagagaaaactcagcagtggaaattgcttggtcagtctcaagataatgaa
aaggaattagctgcgctcttccacctgtggctagaaaccaaagaccaggccttctgtaag
caggaaaatgaagacagctcagatgccatgacacctgtccctcgagtaagaactgactat
gtggttcgacctagcacaggagaggagaaacgggtttttcaagagcaggagcgttacagg
tacagccaaccccataaggcgttcacctttcgcatgcatggctttgagtctgtggtgggg
ccagtgaagggcgtgtttgacaaggagacctccctcaacaaggctcgggagcactcactg
ctgcgctctgaccggcctgcctatgtcaccatcctgtctctcgttcgggatgctgcagct
cggctgcctaacggagaaggcactcgggcagagatctgtgagctgctcaaggactctcag
tttcttgctccagatgtcaccagcactcaggtgaacacagtagtgagtggcgcactggat
cgattgcattatgagaaagacccttgtgtgaaatatgacattggtcggaagctgtggatc
tacctgcatcgcgaccggagcgaggaagagtttgaacggatccatcaagctcaagcagca
gcagctaaggccagaaaagctcttcagcagaagcccaagccgccatccaagacgaagtcc
agtaacaaggagggctccatgaagggccttagtggtccttcggagcaaagccagatgagc
ctcagtgactccagcatgccacctaccccagtcacgcccgtgacccccaccatgccagca
ttgcccacccccatctctcctccacctgtgtcagcggtgagcagaagcagctccaccact
gtctctgagccagccaagtctagctcaggtgttcttctggtgtcgtcaccaacaatgcca
cagctaggaacgatgctttccccagcttccatccagactccacccagttctcaggccact
gctcgggttgtcagccattccagctcaacaggactaccccaggttcgggtggtagcccag
cctagccttcctgctgtcccccagcagtcagtagggccagcacagccgctgccccagatg
tcagcaggaccacagatgcgtgtgccagtcactgctacacaaaccaaagtagtaccccag
gcagttatggcaacagttccagtcaaggggcaaactgcggcggcctctgtgcagcggcct
ggacctgggcagacagggcttacagtgacaaatcttcctgctgccgtcagccctgtgagc
aagacagccatgagttctcctgggaactctgctccaagtgcctccacaacagccgtcatt
cagaatgtcacaggacagaacatcatcaagcaggtgtcaatcactggacagcttggtgtg
aagccccagacaggcaacagcattccactcacagccaccaacttccgtatccagggtaag
gatgtcctgcgcctgccaccttcttccatcaccacagatgccaagggccagactgttttg
agaatcactccagacatgatggccacattggccaagtctcaggttacaacagtcaaactg
actcaggacctctttggggcaggaagtggcactgcaggcaaaggtatctctgctaccttg
catgttacttccaaccctgtgcacgcagctgacagccctgccaaggccccttcggccagc
gtcccttcatcagctccagcagctactaccgtggtcaaagtaactcctgatctcaagcca
acagagacttcgaattcagcttttcgcttgatgccagctcttggtgtgagtgtggcagag
cagaagggaaagaacacagtggcctcttcagaagcaaaacccgctgccacaatccgcatc
gtgcagggcctgggagtgatgcctcctaaagcaggccaaaccatcactgtcgcagcacat
gcgaagcaaggagcctctgttgctggtgggtctggggctgtccattcttcaacggtgtcc
ttacccagtataaatgccactgtgtctaagactgtagctgtggcttccggggcaacaagc
acccccatcagcatcgggactggagcccccactgttcgacaggttcctgttaacactaca
gttgtgtccacatcccagtctgggaagctgcctaccagaatcacagttcctctctctgtg
attagccagccaatgaagggcaagagcgtggtcacagcccccatcatcaaaggcaacctt
ggagccaatctcagtgggctgggtcgcaacattatcctcacaaccatgccagcaggcacc
aagctcattgctggcaataagccagtgagtttcctcactgcccagcagttgcagcagctt
cagcaacaaggtcaggctacacaggtgcgcatccagactgtcccagcatctcatctgcaa
cagggcacagcttctggctcttccaaagcagtgtccactgttgttgtgaccacagctcca
tctcctaagcaagcacctgagcaacagtga
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