Apodemus sylvaticus (European woodmouse): 127690569
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Entry
127690569 CDS
T10613
Symbol
Pbrm1
Name
(RefSeq) protein polybromo-1 isoform X1
KO
K11757
protein polybromo-1
Organism
asyl Apodemus sylvaticus (European woodmouse)
Pathway
asyl03082
ATP-dependent chromatin remodeling
asyl05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
asyl00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
127690569 (Pbrm1)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
127690569 (Pbrm1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
asyl03021
]
127690569 (Pbrm1)
03036 Chromosome and associated proteins [BR:
asyl03036
]
127690569 (Pbrm1)
Transcription machinery [BR:
asyl03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
127690569 (Pbrm1)
Chromosome and associated proteins [BR:
asyl03036
]
Eukaryotic type
Chromatin remodeling factors
PBAF complex
127690569 (Pbrm1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bromodomain
BAH
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
127690569
NCBI-ProteinID:
XP_052045970
LinkDB
All DBs
Position
8:94652837..94746461
Genome browser
AA seq
1730 aa
AA seq
DB search
MRRLAFRGAGCALVKLKKLDSMGSKRRRATSPSSSVSGDFDDGHHSVPTPGPSRKRRRLS
NLPTVDPIAVCHELYNTIRDYKDEQGRLLCELFIRAPKRRNQPDYYEVVSQPIDLMKIQQ
KLKMEEYDDVNLLTADFQLLFNNAKAYYKPDSPEYKAACKLWDLYLRTRNEFVQKGEADD
EDDDEDGQDNQGTLTEGSPPGYLKEILEQLLDAIVVATNPSGRLISELFQKLPSKVQYPD
YYAIIKEPIDLKTIAQRIQNGSYKSIHAMAKDIDLLAKNAKTYNEPGSQVFKDANSIKKI
FYMKKAEIEHHEMTKSSLRIRTASNLAAARLTGPSHNKSSLGEERNPTSKYYRNKRAVQG
GRLSAITMALQYGSESEEDAALAAARYEEGESEAESITSFMDVSNPFHQLYDTVRSCRNN
QGQLIAEPFFHLPSKKKYPDYYQQIKMPISLQQIRTKLKNQEYETLDHLECDLNLMFENA
KRYNVPNSTIYKRVLKLQQVMQAKKKELARRDDIEDGDSMISSATSDTGSAKRKRNTHDS
EMLGLRRLSSKKNIRKQRMKILFNVVLEAREPGSGRRLCDLFMVKPSKKDYPDYYKIILE
PMDLKIIEHNIRNDKYAGEEGMMEDMKLMFRNARHYNEEGSQVYNDAHILEKLLKDKRKE
LGPLPDDDDMASPKLKLSRKSGVSPKKSKYMTPMQQKLNEVYEAVKNYTDKRGRRLSAIF
LRLPSRSELPDYYLTIKKPMDMEKIRSHMMANKYQDIDSMVEDFVMMFNNACTYNEPESL
IYKDALVLHKVLLETRRDLEGDEDSHVPNVTLLIQELIHNLFVSVMSHQDDEGRCYSDSL
AEIPAVDPNFPNKPPLTFDIIRKNVESNRYRRLDLFQEHMFEVLERARRMNRTDSEIYED
AVELQQFFIRIRDELCKNGEILLSPALSYTTKHLHNDVEKEKKEKLPKEIEEDKLKREEE
KREAEKSEDSSGTTGLSGLHRTYSQDCSFKNSMYHVGDYVYVEPAEANLQPHIVCIERLW
EDSAGEKWLYGCWFYRPNETFHLATRKFLEKEVFKSDYYNKVPVSKILGKCVVMFVKEYF
KLCPENFRDEDVFVCESRYSAKTKSFKKIKLWTMPISSVRFVPRDVPLPVVRVASVFANA
DKGDDEKNADNSDDSRAEDSFNLEKEKEDVPVEMSNGEPGCHYFEQLRYNDMWLKVGDCV
FIKSHGLVRPRVGRIEKVWVRDGAAYFYGPIFIHPEETEHEPTKMFYKKEVFLSNLEETC
PMSCILGKCAVLSFKDFLSCRPTEIPENDILLCESRYNESDKQMKKFKGLKRFSLSAKVV
DDEIYYFRKPIIPQKEPSPLLEKKIQLLEAKFAELEGGDDDIEEMGEEDSEVIEPPSLPQ
LQTPLATELDLMPYTPPQLSVLQSTPKSAKGSAKKDGSKRKINMSGYILFSSEMRAVIKA
QHPDYSFGELSRLVGTEWRNLETAKKAEYEERAAKVAEQQERERAAQQQQPSASPRAGTP
VGALMGVVPPPTPMGMLNQQLTPVAGMMGGYPPGLPPLQGPVDGLVSMGSMQPLHPGGPP
PHHLPPGVPGLPGIPPPGVMNQGVSPMVGTPAPGGSPYGQQVGVLGPPGQQAPPPYPGPH
PAGPPVIQQPTTPMFVAPPPKTQRLLHSEAYLKYIEGLSAESNSISKWDQTLAARRRDVH
LSKEQESRLPSHWLKSKGAHTTMADALWRLRDLMLRDTLNIRQAYNLENV
NT seq
5193 nt
NT seq
+upstream
nt +downstream
nt
atgaggagattggcttttcgaggtgctggttgtgctctggtaaagctgaagaagttggat
tccatgggttccaagagaagaagagctacttctccttccagcagtgtcagtggagacttt
gatgatgggcaccattctgtgcctacaccaggcccaagcaggaaaaggagaagactgtcc
aatcttccaactgtagatcctattgctgtgtgccatgaactctataacaccatccgagac
tataaggatgagcagggcagactcctctgtgagctgttcattagggctccaaagcggaga
aatcaaccagactattatgaagtggtttctcagcccattgacttgatgaaaatccaacag
aaacttaaaatggaagagtatgatgatgttaatctgctgactgctgacttccagctgctt
tttaacaatgcaaaggcctattataagccagattcccctgaatataaagctgcttgtaag
ctctgggatttgtaccttcgcacaagaaatgagttcgttcagaaaggagaagcagacgac
gaagacgatgatgaggatgggcaagacaaccagggaacactgactgaaggctctcctcca
ggttacctgaaggagatcctggaacagcttcttgacgccatagttgtagccacaaatcca
tcgggacggctcatcagtgaactttttcagaaactgccttccaaagtgcaatatccagac
tattatgcaataattaaggaacctatagatctcaagaccattgctcagaggatacagaat
ggaagttacaaaagtatacatgcaatggccaaagatatagatctcctagcaaaaaatgcc
aaaacatataatgagcctgggtctcaagtattcaaggatgccaattcgatcaaaaaaata
ttttatatgaaaaaggcagaaattgaacatcatgaaatgactaaatcaagtcttcgaata
aggactgcatcaaatttggctgcagccaggctgacaggtccttcgcacaataaaagcagc
cttggtgaagaaagaaaccccactagcaagtattaccgtaataaaagagcagttcaaggt
ggtcgcttgtcagcaattaccatggcacttcagtatggctcagaaagcgaagaggatgct
gctttagctgctgcacggtatgaagaaggggagtctgaagcagagagcattacttccttt
atggatgtttccaacccttttcatcagctttatgacacagttaggagctgtcggaacaac
caagggcagctcatagcagaaccctttttccatctgccttcaaagaaaaaatacccagat
tattatcagcaaattaaaatgcccatatcacttcaacagatcagaacaaagctaaagaac
caagaatatgaaactttagatcatttggagtgtgatctgaatttaatgtttgaaaatgcc
aaacgctataacgttcccaattcaaccatctataagcgagttctaaaactgcaacaagtc
atgcaggcaaagaagaaagagcttgccaggagagatgacattgaggacggagacagcatg
atctcctcagctacttctgatactggtagtgccaaaaggaaaaggaatactcatgacagt
gagatgttgggtctcaggaggctatccagtaaaaagaacataagaaaacagcgaatgaaa
attttattcaatgttgttcttgaagctcgagagccaggttcaggcagaagactttgtgat
ctatttatggttaagccatccaagaaggactatcctgattattataaaatcatcttagag
cccatggacctgaaaataattgagcataacatccgaaatgacaaatatgcaggtgaagaa
ggaatgatggaagacatgaaactcatgttccgcaatgccaggcactacaatgaggagggc
tcccaggtatacaatgatgcccatatcctggagaagttactcaaagataaaaggaaagag
ctgggcccattgcctgatgatgatgacatggcttctcccaagcttaaactgagtaggaag
agtggtgtttctcctaagaaatcaaagtacatgactccaatgcagcagaaactgaacgaa
gtgtatgaagctgtaaagaactacactgacaagaggggccgccgccttagtgctatattc
ctaaggctcccctccaggtcagagctgcctgactactacctgaccatcaaaaagcccatg
gacatggagaaaattcgaagtcacatgatggcaaacaagtaccaggatatagattctatg
gtagaggactttgtcatgatgtttaataatgcctgtacctacaatgaaccagagtctctg
atctacaaagatgctcttgtcctacataaagtcctccttgaaactcggagagacctggag
ggagatgaggattctcatgtccctaatgtgaccttgctgattcaagaacttatccataat
ctttttgtgtcagtcatgagtcatcaggatgatgaaggaagatgttacagcgactcctta
gcagaaattcctgctgtggatccaaactttcccaacaaacctccccttacatttgacatt
attaggaagaatgttgagagtaatcggtatcgacgacttgatttatttcaggagcatatg
tttgaagtattggaaagggcaagaaggatgaatcggacagattccgaaatatatgaggac
gcagtagaacttcagcagttttttattagaattcgtgatgaactctgcaaaaatggagag
atccttctttctccagcactgagctataccacaaaacatttacataacgatgtggaaaaa
gaaaaaaaggaaaaattacctaaagaaatagaggaagataaactaaaacgagaagaagag
aaaagagaagccgaaaaaagtgaagattcctcaggtactacaggcctctcaggcttgcat
cgcacatacagccaggactgcagctttaagaacagcatgtatcacgtcggagattatgtg
tatgttgagcctgcagaggccaatcttcaaccacatatagtctgtattgagagactgtgg
gaggattcagctggtgaaaaatggttgtacggctgttggttttatcggccaaatgaaaca
ttccatttggctacacgaaaatttctagaaaaagaagtttttaagagtgactattataat
aaagttcctgttagtaaaattctaggcaaatgtgtggtcatgtttgtcaaggaatacttt
aaattatgtccagaaaactttcgagatgaggatgtttttgtctgtgaatcaaggtattct
gccaaaaccaaatcttttaagaaaattaaactgtggaccatgcccatcagttcagtcagg
tttgtccctcgagatgtgcccttgcctgtggttcgagtggcctctgtatttgcaaatgca
gataaaggggatgatgagaagaatgcagacaactccgatgacagtcgagctgaagacagt
tttaacttggaaaaggaaaaagaagatgttcctgtggagatgtccaatggtgagccaggt
tgccactactttgagcagcttcggtacaatgatatgtggctgaaggttggcgattgtgtc
ttcatcaaatcccatggcttggtgcgccctcgagtgggcagaattgaaaaagtatgggtc
cgagatggagctgcgtatttctatggccctatcttcattcacccagaagaaacagaacat
gagcccacaaaaatgttttataaaaaagaagtgtttctgagtaatttggaagagacctgc
cccatgagttgtattctggggaaatgtgctgtgttgtcattcaaggacttcctctcctgc
aggccaactgaaataccagaaaatgacattctgctttgtgagagccgctataacgaaagt
gacaagcagatgaagaagttcaaggggttgaagagattttcactctctgctaaagttgta
gatgatgaaatttactacttcaggaaaccaattattcctcagaaggaaccctcacctttg
ttagaaaagaagatacaattgctagaagctaaatttgctgagttagaaggtggagatgat
gatattgaagagatgggagaagaggatagtgaagtcattgaacctccatctctccctcag
cttcagacacccctggccactgagctggacctcatgccctacacacccccacagctttct
gtcttacagtctaccccaaagtctgccaaaggcagtgcaaagaaggatggttctaaacgg
aaaatcaacatgagtggctacattttgttcagcagtgaaatgagagctgtgattaaggcc
cagcacccagactactcttttggggagctcagcagacttgtggggacagaatggagaaac
cttgaaacagccaaaaaagcagaatatgaagagcgggcagctaaagttgctgagcagcag
gagagagagcgagcagcacagcaacagcagccgagtgcttctccccgagcaggcacccct
gtgggggctctcatgggggtggtgccaccaccaacaccaatggggatgctcaatcagcag
ttgacacctgttgcaggcatgatgggtggctatccgccaggccttccacctttgcagggc
ccagttgatggccttgttagcatgggcagcatgcagccacttcaccctggggggcctcca
cctcaccatcttccgccaggtgtgcctggcctcccaggcatcccaccacccggtgtgatg
aatcaaggagtatcccccatggtagggactccagcaccaggtggaagtccatatggacaa
caggtaggagttctgggacctccagggcagcaggcaccacctccatatcctggccctcat
ccagctggcccccctgtcatacagcagccaacaacacccatgtttgtggctcccccacca
aagacccaaaggcttctccactcagaggcctacctgaaatacattgaaggactcagtgct
gaatccaacagcattagcaagtgggaccaaactctggcggctcgaagacgggatgtgcat
ttgtcaaaagagcaggagagccgcctaccttctcactggctcaaaagtaaaggtgcacac
accaccatggcggacgccctctggcgcctgcgggatttaatgcttcgagacactctcaat
atccgacaggcatacaacctggaaaatgtctaa
DBGET
integrated database retrieval system
