Apodemus sylvaticus (European woodmouse): 127690625
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Entry
127690625 CDS
T10613
Symbol
Fen1
Name
(RefSeq) flap endonuclease 1
KO
K04799
flap endonuclease-1 [EC:3.1.-.-]
Organism
asyl Apodemus sylvaticus (European woodmouse)
Pathway
asyl03030
DNA replication
asyl03410
Base excision repair
asyl03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
asyl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
127690625 (Fen1)
03410 Base excision repair
127690625 (Fen1)
03450 Non-homologous end-joining
127690625 (Fen1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
asyl03032
]
127690625 (Fen1)
03400 DNA repair and recombination proteins [BR:
asyl03400
]
127690625 (Fen1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
asyl04147
]
127690625 (Fen1)
DNA replication proteins [BR:
asyl03032
]
Eukaryotic type
DNA Replication Elongation Factors
Other elongation factors
127690625 (Fen1)
Prokaryotic type
Elongation factors (archaeal)
Other elongation factors
127690625 (Fen1)
DNA repair and recombination proteins [BR:
asyl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
127690625 (Fen1)
Exosome [BR:
asyl04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
127690625 (Fen1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
XPG_N
XPG_I
5_3_exonuc
XPG_I_2
DUF3560
HHH_5
tRNA_bind_2
Motif
Other DBs
NCBI-GeneID:
127690625
NCBI-ProteinID:
XP_052046133
LinkDB
All DBs
Position
1:53167000..53171422
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AA seq
380 aa
AA seq
DB search
MGIHGLAKLIADVAPSAIRENDIKSYFGRKVAIDASMSIYQFLIAVRQGGDVLQNEEGET
TSHLMGMFYRTIRMMENGIKPVYVFDGKPPQLKSGELAKRSERRAEAEKQLQQAQEAGME
EEVEKFTKRLVKVTKQHNDECKRLLSLMGIPYLDAPSEAEASCAALAKAGKVYAAATEDM
DCLTFGSPVLMRHLTASEAKKLPIQEFHLSRILQELGLNQEQFVDLCILLGSDYCESIRG
IGPKRAVDLIQKHKSIEEIVRRLDPSKYPLPENWLHKEAQQLFLEPEVLDTESVELKWSE
PNEEELVRFMCGEKQFSEERIRSGVKRLSKSRQGSTQGRLDDFFKVTGSLSSAKRKEPEP
KGPAKKKAKTGGAGKFRKGK
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atgggaattcacggcctcgccaaactaattgctgatgtggcccccagtgccatccgtgag
aatgacatcaagagctactttggtcggaaagtggccatcgatgcctctatgagcatctac
cagttcctgattgctgttcgccagggtggggacgtgctgcagaacgaggagggggagacc
accagccacctgatgggcatgttctaccggaccatccgcatgatggaaaatggcatcaag
cccgtgtatgtcttcgatggcaaaccaccgcagctgaagtcaggcgagctggccaaacgc
agtgagaggcgcgcggaggccgagaagcagctgcagcaggctcaggaggctgggatggag
gaggaggtggagaagttcacaaagcgcctcgtgaaggtcaccaagcaacacaacgacgag
tgcaagcgcctgctgagcctcatgggcatcccgtacctcgacgcacccagcgaggcggag
gccagctgtgctgccctggccaaggccggcaaggtctatgccgcagccacggaggacatg
gactgcctcactttcggcagccccgtgctaatgcgacacttgactgccagcgaggccaag
aagctgcccatccaagagttccacctgagccgcatcctgcaggagctgggtctgaaccaa
gagcagtttgtggacctgtgcatcctgctggggagcgactactgtgagagcatccgaggc
atcgggcccaagcgggcggtcgacctcatccagaagcacaagagcatcgaggagatcgtg
aggcggctggatcccagcaagtacccgcttccagaaaactggctccacaaggaagcccag
cagctcttcctggagcccgaagtactggacacagagtctgtggagctgaagtggagcgag
ccaaatgaagaagagctggtcagatttatgtgtggtgaaaagcagttttctgaggagcga
attcgcagcggggtcaagcggctgagtaagagccgccagggcagcacccagggacgtcta
gatgatttcttcaaggtgaccggctcgctctcttcagctaagcgcaaggagccagaaccc
aaggggcctgctaagaagaaagcaaagactgggggagcggggaagttcagaaagggaaaa
taa
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