Apodemus sylvaticus (European woodmouse): 127690914
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Entry
127690914 CDS
T10613
Symbol
Nalcn
Name
(RefSeq) sodium leak channel NALCN isoform X1
KO
K21863
sodium leak channel non-selective protein
Organism
asyl Apodemus sylvaticus (European woodmouse)
Brite
KEGG Orthology (KO) [BR:
asyl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
asyl04040
]
127690914 (Nalcn)
Ion channels [BR:
asyl04040
]
Voltage-gated cation channels
Sodium leak channel, non-selective
127690914 (Nalcn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
PKD_channel
PsaF
DUF5914
FAM165
Motif
Other DBs
NCBI-GeneID:
127690914
NCBI-ProteinID:
XP_052046438
LinkDB
All DBs
Position
8:1205948..1499530
Genome browser
AA seq
1737 aa
AA seq
DB search
MLKRKQSSRVEAQPVTDFGPDESLSDNADILWINKPWVHSLLRICAIISVISVCMNTPMT
FEHYPPLQYVTFTLDTLLMFLYTAEMIAKMHIRGIVKGDSSYVKDRWCVFDGFMVFCLWV
SLVLQVFEIADIVDQMSPWGMLRIPRPLIMIRAFRIYFRFELPRTRITNILKRSGEQIWS
VSIFLLFFLLLYGILGVQMFGTFTYHCVVNDTKPGNVTWNSLAIPDTHCSPELEEGYQCP
PGFKCMDLEDLGLSRQELGYSGFNEIGTSIFTVYEASSQEGWVFLMYRAIDSFPRWRSYF
YFITLIFFLAWLVKNVFIAVIIETFAEIRVQFQQMWGTRSSTTSTATTQMFHEDAAGGWQ
LVAVDVNKPQGRAPACLQKMMRSSVFHMFILSMVTVDVIVAASNYYKGENFRRQYDEFYL
AEVAFTVLFDLEALLKIWCLGFTGYISSSLHKFELLLVIGTTLHVYPDLYHSQFTYFQVL
RVVRLIKISPALEDFVYKIFGPGKKLGSLVVFTASLLIVMSAISLQMFCFVEELDRFTTF
PRAFMSMFQILTQEGWVDVMDQTLNAVGHMWAPLVAIYFILYHLFATLILLSLFVAVILD
NLELDEDLKKLKQLKQSEANADTKEKLPLRLRIFEKFPNRPQMVKISKLPSDFTVPKIRE
SFMKQFIDRQQQDTCCLFRILPSTTSSSDNPKKPTAEDNKYIDQKLRKSVFSIRARNLLE
KETAVTKILRACTRQRMLSGSFEGQPAKERSILSVQHHIRQERRSLRHGSNSQRISRGKS
LETLTQDHSNTVRYRNAQREDSEIKMIQEKKEQAEMKRKVQEEELRENHPYFDKPLFIVG
REHRFRNFCRVVVRARFNASKTDPVTGAVKNTKYHQLYDLLGLVTYLDWVMITVTICSCI
SMMFESPFRRVMHAPTLQIAEYVFVIFMSIELNLKIMADGLFFTPTAVIRDFGGVMDIFI
YLVSLIFLCWMPQNVPAESGAQLLMVLRCLRPLRIFKLVPQMRKVVRELFSGFKEIFLVS
ILLLTLMLVFASFGVQLFAGKLAKCNDPNIIRREDCNGIFRINVSVSKNLNLKLRPGEKK
PGFWVPRVWANPRNFNFDNVGNAMLALFEVLSLKGWVEVRDVIIHRVGPIHGIYIHVFVF
LGCMIGLTLFVGVVIANFNENKGTALLTVDQRRWEDLKSRLKIAQPLHLPPRPDNDGFRA
KMYDITQHPFFKRTIALLVLAQSVLLSVKWDVEDPVTVPLATMSVVFTFIFVLEVTMKII
AMSPAGFWQSRRNRYDLLVTSLGVVWVVLHFALLNAYTYMMGACVIVFRFFSICGKHVTL
KMLLLTVVVSMYKSFFIIVGMFLLLLCYAFAGVVLFGTVKYGENINRHANFSSAGKAITV
LFRIVTGEDWNKIMHDCMVQPPFCTPDEFTYWATDCGNYAGALMYFCSFYVIIAYIMLNL
LVAIIVENFSLFYSTEEDQLLSYNDLRHFQIIWNMVDDKREGVIPTFRVKFLLRLLRGRL
EVDLDKDKLLFKHMCYEMERLHNGGDVTFHDVLSMLSYRSVDIRKSLQLEELLAREQLEY
TIEEEVAKQTIRMWLKKCLKRIRAKQQQSCSIIHSLRESQQQELSRFLNPPSIETTQPSE
DTNANSQDHNMQPETSSQQQLLSPTLSDRGGSRQDASDTGKPQRKIGQWRLPSAPKPISH
SVSSVNLRFGGRTTMKSVVCKMNPMPDTASCGSEVKKWWTRQLTVESDESGDDLLDI
NT seq
5214 nt
NT seq
+upstream
nt +downstream
nt
atgctcaaaagaaagcagagttccagggtggaagcccagccggttactgactttggtcct
gatgaatctctatcagacaatgctgacatactctggattaataagccatgggtgcactct
ctgctacgtatctgtgccatcatcagcgtcatctcagtgtgcatgaacacacctatgacc
ttcgagcactatcctcctcttcagtatgtgaccttcaccttggatactttattgatgttc
ctctataccgcagagatgatagcaaagatgcacatacggggaattgtcaagggtgatagc
tcctatgtgaaggatcgctggtgtgtttttgatggattcatggtcttttgtctttgggtt
tccctcgtgttacaggtgtttgaaatagctgacatagttgatcagatgtcaccttggggc
atgctgcggatcccacggccactcattatgatccgagctttcaggatttatttccgattt
gaactgccaaggacaagaattacaaacattttaaagcggtcaggagaacagatatggagt
gtttcaattttcctacttttcttccttcttctgtatgggattttaggagttcaaatgttt
ggaacatttacctaccactgtgtagtcaatgatacaaagccaggaaatgtaacctggaat
agcttagctatcccagatacacactgctccccagagctagaagaaggctatcagtgcccc
ccaggatttaaatgcatggacttggaagacctgggacttagcaggcaagagctgggctac
agtggctttaatgagataggtacgagtatattcacagtctatgaggcttcatctcaggaa
ggctgggtattccttatgtacagagcaattgacagtttcccccgctggcgctcctacttc
tacttcatcacactgattttcttccttgcttggcttgtcaagaatgtgtttattgctgtc
atcattgagacatttgcagaaatcagagtacaatttcaacagatgtggggaactcgaagc
agcacaacttctacggccaccacacagatgtttcatgaagatgctgctggtggttggcaa
ctggtagctgtggatgtcaacaagccccaggggcgtgccccagcttgcctacagaaaatg
atgcggtcatcggttttccacatgtttatactaagcatggtgactgtggatgtaatagtt
gctgccagcaattactacaagggagagaacttcagaaggcagtatgatgaattctacctt
gcagaggtggcttttacagtccttttcgacctggaagcacttctgaagatatggtgcttg
ggatttactggctatatcagctcatctctccacaagtttgaactattgcttgttattggg
acgactctccatgtgtacccagatctttatcattctcagttcacatacttccaggttctg
cgggtagtccggcttattaagatttccccagcattggaagactttgtgtacaagatattt
ggtcccgggaaaaaacttggaagcttagtggtgttcactgccagcctcctgatagttatg
tcagccatcagtttgcagatgttctgcttcgttgaagaactggacagattcaccacgttt
ccaagggcatttatgtctatgttccagatcctcacccaggaaggatgggtggatgtgatg
gatcagactctgaatgctgtggggcatatgtgggctccactggttgccatctatttcatc
ctctatcatctctttgcaactctgatcctcctgagtttgtttgttgctgttattttggac
aacttagaacttgatgaagatctaaagaagctcaaacaattaaagcaaagtgaagcaaac
gcggataccaaagaaaaactccctttgcgcttgagaatcttcgaaaaattcccaaacaga
ccgcaaatggtgaaaatctcaaaacttccttcagattttacagttcctaagatcagggag
agcttcatgaagcagttcattgaccgccagcaacaggacacctgctgtcttttcagaatc
ctcccctctacgacctcctcgtctgacaaccccaagaagcccacagctgaagacaacaaa
tacattgatcaaaaactccgcaagtctgttttcagcataagggcgaggaacttactggaa
aaggagactgcagtcacaaaaatcttaagagcttgcactagacagcgcatgctgagcgga
tcattcgaggggcagccagcaaaggagaggtcgatcctcagcgtgcagcatcacatccgc
caggagcgcaggtcactaagacatggatccaacagccagaggatcagcaggggcaaatct
ctggaaactttaactcaagatcattcaaatacagtgcgctacagaaatgcacaaagagaa
gacagtgaaataaagatgattcaggagaagaaggagcaagcggagatgaaaaggaaggtg
caagaagaggagctgcgagagaaccacccgtactttgacaaacctctcttcatcgtggga
cgagaacacaggttcagaaacttctgccgtgtggtggttcgagcacgcttcaatgcatcc
aaaacagatcctgtcacaggagctgtgaaaaatacaaagtaccaccaactttatgatttg
ctgggacttgtcacctacctggactgggtcatgatcactgtgaccatctgctcttgcatt
tctatgatgttcgaatcccccttccggagagtcatgcatgcacccactttacagatcgca
gaatatgtgtttgtgatattcatgagcattgagcttaatctgaagattatggcagatggc
ttgtttttcactccaactgctgtcatcagggactttggtggcgtcatggacatatttatc
tatcttgtgagcttgatatttctttgttggatgcctcaaaatgtgcctgctgagtcagga
gcccagctgctgatggttcttcgatgcctaagacctcttcgaatattcaaactggttccc
caaatgaggaaagttgttcgagaacttttcagtggtttcaaggaaatatttttggtctcc
attctgttgttgacattaatgctcgttttcgcaagctttggagttcagctctttgctgga
aagttagccaagtgcaatgaccccaacattatcagaagggaagactgtaatggcatcttc
agaattaatgtaagtgtgtccaagaacttaaatttaaaactaagacctggagagaaaaaa
cctggattttgggtgccccgtgtttgggcaaatcctcggaactttaactttgacaatgtg
ggaaatgccatgctggcattgtttgaagttctgtccttgaaaggttgggtagaagtgagg
gatgtcattattcatcgcgtggggccgatccatggaatctatattcatgttttcgtattc
ctgggttgcatgattggactgaccctttttgttggtgtagttattgctaacttcaatgaa
aacaaggggacagccctgctgacggtagatcagagaagatgggaagatctcaagagcaga
ttgaagatcgcacagcctcttcatctcccacctcggccggataatgatggttttagagct
aaaatgtatgatataacgcagcatccattttttaagaggacaatcgcattgctggttctg
gcccagtctgtgttgctatctgtcaagtgggacgttgaggatcctgtgacggttcctttg
gccacaatgtcagttgtcttcaccttcatctttgtcttagaggttacaatgaagatcata
gcaatgtcaccagctgggttctggcaaagcagaagaaaccgatacgatctcttggtgaca
tcccttggtgttgtgtgggtggtgctccattttgctctactgaatgcatacacctacatg
atgggagcctgtgtgattgtctttagatttttctccatctgtggaaagcatgtgacacta
aagatgctccttctgactgtggttgtcagcatgtacaagagcttctttatcatcgtagga
atgtttctcttgctgctatgctatgcctttgctggagttgttctgtttggtaccgtaaag
tatggagagaacattaacaggcatgccaatttttcttcagctggcaaagccattactgta
ttgtttcgaattgtcacaggggaagactggaacaagattatgcatgattgtatggttcaa
cctccattttgtactccagatgaatttacatactgggcaacagactgtggcaattatgca
ggggcacttatgtacttctgctcattctatgtcatcatcgcctacatcatgctgaatctg
cttgtagccataattgtggagaatttctctttgttttattccactgaagaggaccagctt
ttgagttacaatgatcttcgccattttcaaatcatatggaacatggtagatgataaaaga
gagggtgtgatccccaccttccgagtgaagttcctgctacggctgctgcgtgggaggctg
gaagtggaccttgataaagacaagcttctgtttaagcacatgtgctatgagatggagagg
ctgcacaatggtggtgatgtcacctttcatgatgtcttgagcatgctgtcttaccgctct
gtagacatcaggaagagcctgcagctagaggagctgctagcaagggagcagctagagtac
accatagaggaggaggtggctaagcagactattcgcatgtggctgaagaaatgcttgaaa
cgcatccgggctaaacaacagcagtcatgcagcatcatccacagcctgagagagagccag
cagcaagagctgagcaggttcctgaatcctcccagcattgagaccacccagccaagtgag
gacaccaatgccaacagccaggaccacaatatgcaacctgagacaagcagtcagcagcag
ctcttaagccctactctgtcagacagaggaggaagtcgacaggatgcatcagataccgga
aaaccgcaaaggaagattgggcaatggcgtctgccttcagctcccaaaccaataagccat
tctgtgtcttcggttaacctacggtttggaggaaggacaacaatgaagtctgtggtgtgc
aagatgaaccccatgccagacacagcttcctgtggctctgaagttaagaagtggtggacc
agacagctgactgtggaaagtgatgaaagtggagatgacctcctggatatctag
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