Apodemus sylvaticus (European woodmouse): 127691206
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Entry
127691206 CDS
T10613
Symbol
Tbc1d4
Name
(RefSeq) LOW QUALITY PROTEIN: TBC1 domain family member 4
KO
K17902
TBC1 domain family member 4
Organism
asyl Apodemus sylvaticus (European woodmouse)
Pathway
asyl04919
Thyroid hormone signaling pathway
asyl04931
Insulin resistance
asyl05415
Diabetic cardiomyopathy
Brite
KEGG Orthology (KO) [BR:
asyl00001
]
09150 Organismal Systems
09152 Endocrine system
04919 Thyroid hormone signaling pathway
127691206 (Tbc1d4)
09160 Human Diseases
09166 Cardiovascular disease
05415 Diabetic cardiomyopathy
127691206 (Tbc1d4)
09167 Endocrine and metabolic disease
04931 Insulin resistance
127691206 (Tbc1d4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
asyl04131
]
127691206 (Tbc1d4)
Membrane trafficking [BR:
asyl04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
127691206 (Tbc1d4)
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
127691206 (Tbc1d4)
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Rab associated proteins
127691206 (Tbc1d4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
RabGap-TBC_2
DUF3350
PID
DUF4249
Motif
Other DBs
NCBI-GeneID:
127691206
NCBI-ProteinID:
XP_052046743
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All DBs
Position
8:24295963..24483814
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AA seq
1243 aa
AA seq
DB search
MESPSCIQDEPFPHPLEPEPSAPAQPGATKPGEKRFRLWYVGGSCLDRRTTLPMLPWLMA
EIRRRSQKPEAGGCGAPAAREVLLVLSAPFLRCVPAPGAGVGGGAGSGAVQPNTGVFIFE
HKAQHISRFIHNSHDLTYFAYLIKAQPDDPESQMACHVFRATDPNQVPDVISSIRQLSKA
AMKEDSKPSKDNEDAFYNSQKFEVLYCGRVIVTHKKAPSSLIDDCKDKFSLHEQQRLKLQ
GERGGDPGDEMGVLEAESPVSPDDSLPEKADGTVSSPRALSSLAGLPALASQPVLASSRV
CFPERILEDCGFDEQQEFRSRCSSVTGVMQKKVHDNNQKTQPRRRHASAPSHVQPSDSEK
NRTMLFQVGRFEINLISPDTKSVVLEKNFKDISSCSQGIKHVDHFGFICRESPEPGLSQY
ICYVFQCANESLVDEIMLTLKQAFSTAAALQSAKTQIKLCEACPMHSLHKLCERIEGLYP
PRAKLVIQRHLSSLTDNEQADIFERVQKMKPISDQEENELVILHLRQLCEAKQKSHVHIG
EGPAMISNSTIPENAASGGRFKLDVLKNKAKRSLTSSLENIFSRGANRMRGRLGSVDSFD
RSNSLASEKDFSPGDSPPGTPPASPLSSAWHAFPEEDSDSPQFRRRAHTFSHPPSSSRRK
LNLQDGKAHGLRSPLLRQSSSEQCSDGEGRKRTSSACSNESLSAGGTPVTPRRISWRQRI
FLRVASPVNKSPSAMQQQKDGLDRTELLPLSPLSPTMEEEPLVIFLSGDEDAEKTGEKKK
SKELKSLWKKAIHQQILLLRMEKENQKLEARRDELQSRKVKLDYEEVGTCQKEVLIAWDK
KLSNCRTKIRCDMEDIHTSLKEGVPKSRRGEIWQFLALQYRLRHRLSNKQQPPDTSYKEL
LKQLTAQQHAILVDLGRTFPTHPYFSVQLGAGQLSLFNLLKAYSLLDKEVGYCQGISFVA
GVLLLHMSEEQAFEMLKFLMYDLGFRKQYRPDMMSLQIQMYQLSRLLHDYHRELYNHLEE
NEISPSLYAAPWFLTLFASQFPLGFVARVFDIIFLQGTEVIFKVALSLLSSQEALIMECE
SFENIVEFLKNTLPDMNTTEMEKIITQVFEMDISKQLHAYEVEYHVLQDELLESSYACED
SESLEKLERANNQLKRQNMDLLEKLQVAHTKIQALESNLETLLTRETKMKALIRTLEQDK
MTYQKTVEQIRKLLPADALANCELLLRDLTHPTNDKAKPGNKP
NT seq
3732 nt
NT seq
+upstream
nt +downstream
nt
atggagtcgcctagctgcattcaggatgagcctttcccgcaccccctggagcctgagccg
agtgccccagcgcagccaggtgccaccaagcctggagaaaagcgcttccggctatggtac
gtgggagggtcttgcttggatcgcaggaccacgctgcccatgctcccctggctcatggct
gagatccgtcggcgcagccagaagcctgaggcgggcggctgcggggcgcccgcggcccgg
gaggtgctcctggtgctcagcgccccctttctgcgttgtgtccccgcgccgggtgccggg
gtcggtgggggcgcaggctccggggccgtgcagcccaacacgggagtgttcatcttcgag
cacaaggctcaacacatctcgcgcttcatccacaacagccacgacctcacctactttgcc
tatttgatcaaggcgcagcccgacgaccccgagtcacagatggcctgtcacgttttccgc
gccacggaccctaatcaggttccggatgtgatcagtagcatcaggcagttatccaaggct
gccatgaaggaggactccaaacccagcaaagataacgaggacgccttctacaactctcag
aagttcgaagtgctctactgcgggcgggtgatcgtgacccacaagaaggcgccctccagc
ctcattgatgactgcaaggacaagttcagcctgcatgagcagcagcggctgaaactgcag
ggcgagcgaggtggcgacccgggggacgagatgggtgtccttgaggccgagtctcctgtg
tctccagatgacagcctgcccgagaaggcagatggcacagtcagcagcccccgtgccctg
tcctccctggctggccttcctgccttggccagccaacccgtactagccagctctcgggtt
tgcttcccagagaggattttggaagattgtggctttgatgaacagcaggagttcaggtct
cggtgcagcagtgtcacaggcgtcatgcaaaagaaggttcatgacaacaaccagaaaaca
cagccaaggaggaggcacgcaagcgcgcccagtcacgtgcagccctcggactcggagaag
aatcggacgatgctcttccaggtcggccgctttgagattaacctcatcagtccagacact
aagtcagttgtgctagagaagaatttcaaagatatctcctcttgttctcagggaataaag
catgtcgatcactttggctttatctgccgggagtctccagagccggggctgagccaatac
atctgttacgtgttccagtgcgccaacgagtctctggtggatgagatcatgctgactctg
aagcaggctttcagcacggctgcggcgctgcagagtgccaagacgcagatcaagctgtgt
gaggcctgccccatgcactctctgcataagctctgtgagagaatcgaaggtctctacccg
ccacgagccaagctggtgatccagaggcatctctcttcgctgacggataacgagcaagct
gacatctttgaacgggttcagaaaatgaaacccatcagcgaccaggaagagaacgaactt
gtgattctgcacctgaggcagctctgtgaggccaagcagaagagtcacgtgcacatcggg
gaagggccggcgatgatctcaaacagtacgatcccagaaaatgctgcaagtggtgggaga
ttcaagctagacgttctgaagaacaaggcgaagaggtccttaacgtcttccctggaaaat
atcttctctaggggagcgaacagaatgagagggcggctcggaagtgtggacagctttgac
cggtccaacagtcttgcctcagagaaggacttctcgccaggggactctcctcctgggaca
ccgccagcctctccgctgtcctctgcctggcacgccttccccgaggaggattccgactcg
ccacagtttcgaagacgggctcacacgttcagccatccaccttcaagttcgaggaggaag
ctgaacttgcaagatgggaaggcccacggcctgcggtcccctctcctgaggcagagctcc
agcgagcaatgcagtgatggagaagggagaaagaggacctcatccgcctgcagcaacgag
tccctgagtgctggaggaaccccggtcactcctcgcagaatctcgtggaggcagcggatt
ttcctccgggttgcgtctcctgtgaacaagtccccctcagctatgcagcagcaaaaagat
gggctagacaggacggagctgctccccttgtctcctctctctcccaccatggaggaagag
cctctcgttatattcttgtctggggacgaggacgcagaaaaaactggagaaaaaaagaaa
tcgaaggagctaaagagtctgtggaagaaagctattcaccagcaaatcctgttgcttcga
atggagaaagaaaaccagaagctggaagcaagaagagatgagctccagtctagaaaagtt
aagttagactacgaagaagtcggtacctgtcagaaggaagtcttaatagcgtgggacaag
aagttgtcaaattgcagaactaaaatcagatgcgacatggaagatatccacacgtccctt
aaagaaggggttcctaaaagtcggcgcggggagatttggcaatttctagcactgcaatac
cgcctgagacacagattgtccaacaaacagcagcctcccgacacctcctacaaggagctt
ctgaagcagctcacagctcagcagcacgccatccttgtggatttggggaggacttttccc
acgcacccttacttttcagtgcagctaggggcaggacagctgtccctctttaacctactg
aaagcctactctctgctggacaaagaggtgggctactgtcaggggatcagctttgtggct
ggagtcctgcttctgcacatgagtgaagagcaagccttcgaaatgctcaagttccttatg
tacgacctgggcttccgcaagcagtaccgaccggatatgatgtcacttcagattcagatg
taccagctgtccagactcctccatgactaccaccgagaactctacaatcatcttgaggaa
aatgagatcagccccagtctgtatgctgcaccctggttcctcacactctttgcctcccag
tttcccttgggattcgtagccagagtttttgatattatttttcttcaaggaactgaggtt
atatttaaggttgctctcagcttactgagcagccaggaagcacttataatggagtgtgaa
agctttgaaaatattgttgaatttctcaaaaatacattacctgatatgaataccactgaa
atggaaaaaattattacccaggtgtttgagatggatatttccaaacagttacatgcctat
gaggtagaatatcatgtgctgcaggatgagcttctggaatcttcgtatgcctgtgaggat
agtgagtctctggagaagctggaaagagccaacaaccaattgaaaagacagaacatggac
ctcttagaaaaactccaggtggctcatactaaaattcaggccttggaatccaacctagaa
actcttttgaccagagaaaccaaaatgaaagctctaatccggaccctggaacaagataag
atgacttatcaaaagacagtggagcaaatccggaagctgctaccagcagacgcgctggcc
aactgtgaactgctgttgagagacctaacccacccaacaaatgacaaagccaagccagga
aataagccataa
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