Apodemus sylvaticus (European woodmouse): 127691241
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Entry
127691241 CDS
T10613
Symbol
Slitrk1
Name
(RefSeq) SLIT and NTRK-like protein 1
KO
K25832
SLIT and NTRK-like protein 1
Organism
asyl Apodemus sylvaticus (European woodmouse)
Pathway
asyl04514
Cell adhesion molecule (CAM) interaction
asyl04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
asyl00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
127691241 (Slitrk1)
04517 IgSF CAM signaling
127691241 (Slitrk1)
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
LRR_14
LRR_LRWD1
LRR_9
Motif
Other DBs
NCBI-GeneID:
127691241
NCBI-ProteinID:
XP_052046813
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Position
8:16780097..16782187
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AA seq
696 aa
AA seq
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MLLWILLLETSLCFAAGNVTGDVCKEKICSCNEIEGDLHVDCEKKGFTSLQRFTAPTSQF
YHLFLHGNSLTRLFPNEFANFYNAVSLHMENNGLHEIVPGAFLGLQLVKRLHINNNKIKS
FRKQTFLGLDDLEYLQADFNLLRDIDPGAFQDLNKLEVLILNDNLISTLPANVFQYVPIT
HLDLRGNRLKTLPYEEVLEQIPGIAEILLEDNPWDCTCDLLSLKEWLENIPKNALIGRVV
CEAPTRLQGKDLNETTEQDLCPLKNRVDSSLPAPPAQEETFAPGPLPTPFKTNVQDEHAT
PGAVPNGGTKIPGNWQLKIKPTPPIASGSARNKPPVHGLPCPGGCSCDHIPGSGLKMNCN
NRNVSSLADLKPKLSNVQELFLRDNKIHSIRKSHFVDYKNLILLDLGNNNIANIENNTFK
NLVDLRWLYMDSNYLDTLSREKFAGLQNLEYLNVEYNAIQLILPGTFNAMPKLRILILNN
NLLRSLPVDVFAGVSLSKLSLHNNYFMYLPVAGVLDQLTSIIQIDLHGNPWECSCTIVPF
KQWAERLGSEVLMSDLKCETPVNFFRKDFMLLSNDEICPQLYARISPTLTSHSKNSTGLA
ETGTHSNSYLDTSRVSISVLVPGLLLVFVTSAFTVVGMLVFILRNRKRSKRRDANSSASE
INSLQTVCDSSYWHNGPYNADGSHRVYDCGSHSLSD
NT seq
2091 nt
NT seq
+upstream
nt +downstream
nt
atgctgctttggattctgttgctggagacgtctctttgttttgccgctggaaacgttaca
ggggacgtttgtaaagagaagatctgttcttgcaatgagatagaaggggacttacacgta
gactgtgaaaaaaagggcttcacaagtctgcagcgcttcaccgccccgacttcccagttt
taccatttatttctgcatggcaattccctcactcgacttttccctaatgagttcgctaac
ttttataatgcggttagtttgcatatggaaaacaatggcttgcatgaaatcgtcccgggg
gcatttctggggctgcagctggtgaagcggctgcatatcaacaacaacaagatcaagtct
tttcgaaagcagacttttttggggctggacgatctggaatacctccaggctgattttaat
ttattacgggatatagacccgggggccttccaggacttgaacaagttggaagtcctcatt
ttaaacgacaatctcatcagcaccctacctgctaacgtattccagtatgtgcccatcacc
cacctcgacctccgaggaaacaggctgaaaacactgccctatgaagaggtcttggagcag
atccctggcattgctgagattctgctagaggataacccttgggactgcacctgtgatcta
ctctccctgaaggaatggctggagaacattcccaaaaacgccctaatcggccgagtggtc
tgcgaagcccccaccaggctccagggtaaagacctcaatgaaaccacggaacaagacctg
tgtcctttaaaaaacagagtggattctagtctcccagctcctcctgcccaggaagagacc
ttcgctcctggccctctgccaactcctttcaagacaaatgtgcaggacgagcatgctacc
ccaggggctgttccaaatggaggtacaaagatcccgggcaattggcagctcaaaatcaaa
cccacgccaccgatagcaagtgggagcgccagaaacaaacccccagtgcatggcttgccc
tgccccgggggctgcagctgtgaccacatcccaggctcgggcttaaagatgaactgtaac
aaccggaacgtgagcagcttggctgatttgaagcctaagctttccaatgtgcaggagctt
ttccttcgagataacaagatccacagcatccgaaaatcacactttgtggattacaagaac
ctcattctattggatctgggcaacaacaacatcgcaaacatagagaacaacactttcaag
aaccttgtggacctcaggtggctgtacatggatagtaactacctggacactctgtcccgg
gagaaatttgctgggctgcagaacctggagtatctgaacgtggagtacaacgcgattcag
ctcattctccccgggactttcaatgccatgcccaaactgaggattcttattctcaacaac
aacttgctgaggtccctacccgtggacgtttttgctggggtctccctgtctaagctcagc
ctgcacaataattacttcatgtacctcccagtggccggggtgctggaccagttaacctcc
atcatccagatagacctgcatggcaacccctgggagtgctcctgcaccattgtgcctttc
aagcaatgggcagaacgcctgggctccgaggtgctgatgagcgacctcaagtgtgagaca
ccggtgaacttctttaggaaggatttcatgctgctctccaatgacgagatctgcccccag
ctgtatgcgaggatctcgcccacgttaacttcgcacagtaaaaacagcactgggttggcg
gagaccgggacacactccaactcctacctagacaccagcagggtgtccatctcggtgttg
gtcccgggactgctgctggtgttcgtcacctccgccttcaccgtagtgggcatgctcgtg
tttatcctgaggaaccgaaagcggtccaagagaagggatgccaattcctctgcgtccgaa
attaattccctacagacagtctgtgactcttcctactggcacaatgggccttacaatgca
gacgggtcccatagggtgtatgattgcggctctcactcactctcagactaa
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