Apodemus sylvaticus (European woodmouse): 127691401
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Entry
127691401 CDS
T10613
Symbol
Hmbox1
Name
(RefSeq) homeobox-containing protein 1 isoform X1
KO
K24885
homeobox-containing protein 1
Organism
asyl Apodemus sylvaticus (European woodmouse)
Brite
KEGG Orthology (KO) [BR:
asyl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
asyl03000
]
127691401 (Hmbox1)
Transcription factors [BR:
asyl03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
127691401 (Hmbox1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HNF-1_N
Homeodomain
Homeobox_KN
HTH_3
AbiJ_NTD3
DUF494
HTH_TSHZ3
HTH_26
HTH_24
CUT
HTH_31
NOC3p
HTH_23
Motif
Other DBs
NCBI-GeneID:
127691401
NCBI-ProteinID:
XP_052047144
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All DBs
Position
8:62423787..62557251
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AA seq
444 aa
AA seq
DB search
MLSSFPVVLLETMSHYTDEPRFTIEQIDLLQRLRRTGMTKHEILHALETLDRLDQEHSDK
FGRRSSYGGSSYGNSTNNVPASSSTATASTQTQHSGMSPSPSNSYDTSPLPCTTNQNGRE
NNDRLSTSNGKMSPSRYHANSIGQRSYSFEASEEDLDVDDKVEELMRRDSSVIKEEIKAF
LANRRISQAVVAQVTGISQSRISHWLLQQGSDLSEQKKRAFYRWYQLEKTSPGATLSMRP
APIPIEDPEWRQTPPPVSATPGTFRLRRGSRFTWRKECLAVMESYFNENQYPDEAKREEI
ANACNAVIQKPGKKLSDLERVTSLKVYNWFANRRKEIKRRANIEAAILESHGIDVQSPGG
HSNSDDVDGNDYSEQDTWQARNGEEEEGRSSEGGREAEKDDSTSHSDHQDPISLAVEMAA
VNHTILALARQGANEIKTEALDDD
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgctcagctcctttccagtggttttgctggaaaccatgtctcactatacagatgaaccc
agatttaccatagaacagatagatctgctccaacgtcttcggcgtaccgggatgaccaaa
catgaaattcttcatgcattagaaactttggaccgtcttgatcaagagcatagtgataag
tttggacggaggtccagctacgggggaagctcctatgggaacagtaccaacaatgttcca
gcatcttcctctacagccacagcttccacgcagacccagcactcgggaatgtccccatca
cccagcaacagttacgatacctccccactgccttgcactaccaatcaaaatgggagggag
aacaatgatcgattgtccacatccaatgggaagatgtcaccatctcgctaccacgcaaac
agcattggtcagaggtcatatagctttgaagcctcagaagaggacctagatgtagatgat
aaagtggaggaattaatgaggagggacagcagtgtgataaaagaggaaatcaaagccttt
cttgccaatcggaggatttcccaagcagttgttgcacaggtaacagggatcagtcagagc
cgaatctctcactggctgctgcagcagggatctgatctgagtgagcagaagaaaagagca
ttctaccgatggtaccagcttgagaagacaagccctggggctacgttaagtatgagacct
gctcccattccaatagaggaccctgaatggagacaaacgcctcccccagtctccgccaca
cccggaaccttccgtcttcgacgagggagtagatttacctggagaaaggagtgcctagct
gtcatggaaagttacttcaatgagaaccagtacccagatgaagcaaagagagaagaaatt
gccaatgcttgcaatgcagtcatacagaagccaggcaaaaagctgtctgacctggaacga
gttacctctctgaaagtatataattggtttgctaatcgacggaaggagatcaagaggaga
gccaatatcgaagcagcaatcctggagagtcatgggatagatgtacagagtccaggaggc
cattccaacagtgacgatgtggacgggaacgactactccgagcaggacacttggcaagca
cgcaatggggaggaggaggagggaagaagttcagagggaggcagagaagcagagaaggat
gacagcaccagccatagtgaccaccaagatcccatctcgctagctgtggagatggcggcc
gtcaaccacactatcttggcattggcccggcagggagccaatgaaatcaagacagaggcc
ctggatgatgactga
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