Apodemus sylvaticus (European woodmouse): 127691447
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Entry
127691447 CDS
T10613
Symbol
Spata13
Name
(RefSeq) spermatogenesis-associated protein 13 isoform X1
KO
K05769
Rho guanine nucleotide exchange factor 4/29
Organism
asyl Apodemus sylvaticus (European woodmouse)
Pathway
asyl04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
asyl00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
127691447 (Spata13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
asyl04131
]
127691447 (Spata13)
Membrane trafficking [BR:
asyl04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
127691447 (Spata13)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RhoGEF
SOS1_NGEF_PH
SH3_1
PH
SH3_9
SH3_2
RHG20_PH
Motif
Other DBs
NCBI-GeneID:
127691447
NCBI-ProteinID:
XP_052047226
LinkDB
All DBs
Position
8:complement(66702782..66831414)
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AA seq
1246 aa
AA seq
DB search
MTTAQDGHGQGAAATCSASNPKAPKMVTSSACQNGGCKSSPGSDPEAGEARLSPSKLVRL
FSGSRKRMNSNSERPRSVVLVGNSSTWNALASFRKMGSFKRLKSSVLQGIQNREGAEVSK
EEATGDPGRAAPNGTIGILGKGPGRCTSLGPLGDGAGSDCSDPEDTEDAFQRSTHRSRSI
RRAYGLGRISLLDLGRQPVPEPAVCEIQVRDPEPSRAVPLPRRSKSIDSLSVLKSSFKRK
SASNLTELQGDRQVPSRTLSGFFTDPEKPGSSERRARRWRSPIRAKDFDRVLRLVSSVKD
AAWKREAPRSAAPSPGPDLGDSNPVLAPQSKLHDDYSRRTSSSVEPDARRGGSLSSPCAP
APCTAAPYTAPEPHLDVDTAVFPLETKSAQPLGNDGPHASSPSTTPTDPEGLSQASREAH
TGSQHPFDPIQMPTPLRPTTPKPQSPQSPGSTKCPSTLSVLSLSSADSEERTEDAGHRQP
GSVSLQDTVLATAGDMGGESGDSSFPANLDRATNPEERKEEVVTEDDWRQGSALEEEQNE
APRVSRRRWGSGRRTRPRPLSDYGQLASRSLSIPEDAIAADPPDEDHVDKIHPASVTTSN
QDPCAPSGCSRASRRRRPISVIGGVSFYGNSQVEDAENLLVQPAARPPVPAHQVPPYKAV
SARLRPFAFSQSTPIGLDRVGRRRQMKTSNVSSDGGAESSALVDDNGSEEDFSYEELCQA
NPRYLQPGGEQLAINELISDGSVVCAEALWDHVTMDDQELGFKAGDVIQVLEASNKDWWW
GRNENKEAWFPASFVRLRVNQEELPESCSSSHGEEQEQETSKARHKHPESQQQMRTNVIQ
EIMNTERVYIKHLKDICEGYIRQCRKHTGMFTSAQLATIFGNIEDIYKFQRKFLKDLEKQ
YNKEEPHLSEIGSCFLQHQEGFAIYSEYCNNHPGACVELSNLMKHSKYRHFFEACRLLQQ
MIDIALDGFLLTPVQKICKYPLQLAELLKYTTQEHGDYDDIKAAYEAMKNVACLINERKR
KLESIDKIARWQVAIVGWEGLDILDRSSELIHSGELTKITRQGKSQQRIFFLFDHQLVSC
KKDLLRRDMLYYKGRMDMDEVELVDVEDGRDKDWNLSMRNAFKLVSKATDEVHLFCARKQ
EDKARWLQAYADERRRVQEDQQMGMEIPENQKKLAMLNAQKAGHGKSKGYNSCPVAPPHQ
SLPPLHQRHITVPTSIPQQQVFALAEPKRKPSLFWHTFHKLTPFRK
NT seq
3741 nt
NT seq
+upstream
nt +downstream
nt
atgacaacagcccaggatggccacgggcaaggagccgcagccacttgttcagcttccaac
ccgaaggcccctaaaatggtgacatcctcagcatgtcagaatggaggctgcaaaagcagc
cccggcagtgatccggaagccggggaagcccgcctcagcccttccaagctggtccgtctc
ttctctggtagtcggaagaggatgaattcgaattctgagaggcctcgctcggtggtcctt
gtggggaattcctccacatggaatgccttggcctccttccgtaaaatgggctcttttaaa
agactaaaatcttctgtccttcaaggaattcagaaccgggagggggcagaagtttccaag
gaggaggcgacaggagacccaggaagggctgctcccaatggcaccattggcatccttgga
aagggcccgggcaggtgtacatccttgggccctctaggagatggcgcggggtcggactgc
tcagaccctgaggacacagaggacgccttccagaggagcacgcaccgttcacgcagcatc
cgcagggcctacggcctgggccgcatcagcctgctggacctggggcggcagccagtgccc
gagcccgctgtgtgtgagatccaagtgcgcgaccctgagcccagcagggctgtgcctctg
ccgcgcagaagcaagagcatcgacagcttgagcgtcctcaagagctccttcaagcgcaag
tctgcatccaacctcacggaactgcagggtgacaggcaggttccctccaggaccctgagc
ggcttcttcacagacccggagaagccgggtagctcagagaggagagccagacgctggagg
agccccatccgggccaaggacttcgaccgagtcctaagactggtgagcagtgtcaaggat
gcggcctggaagagggaggcccccaggagtgcagcccctagccccggtcccgatctgggg
gattcgaacccagtacttgcacctcaaagcaagctacatgatgactactcacggcgtacc
agcagcagcgtggagccagatgccaggcgtggtggttctttgtcctcaccctgtgcccct
gcaccatgcactgctgcgccctacacagctccagaaccccaccttgatgtggatactgca
gtcttccccctagaaactaagagtgctcagccactgggaaacgatggacctcatgccagc
agtccctcgacaacccccacagaccctgaagggttgagtcaagcctccagggaggcgcat
actggcagccagcatccctttgaccctatacagatgcccactcctctgaggcccaccaca
cccaagccgcaaagccctcagagcccagggagtactaagtgccccagtactctgagtgtg
ctgtccctcagttcagcggacagtgaagaacggaccgaggatgccgggcacaggcagcca
ggatccgtgtccctccaggacactgtcctcgccaccgctggtgatatggggggagaaagc
ggtgacagctcttttcctgcgaatcttgacagagccaccaatccagaagagaggaaggaa
gaggtggtgactgaggatgactggcggcagggctcagccctagaggaggagcagaacgag
gcgccccgagtctcccggaggaggtggggctcaggcaggcgcacccggccgcgaccactg
tctgactatggccagttggccagcagaagcttgtccattcctgaagatgccattgctgca
gaccctccagatgaagaccacgtggacaagatacacccagcaagtgtgaccaccagcaac
caggatccatgcgccccctcaggctgttccagggcaagccggcgaaggagacctatatct
gtgatcggaggggtcagcttctatggcaacagccaggtagaggatgcggagaacctcttg
gtccaaccagcagccaggcctcccgtgcctgcacaccaagttccaccctacaaggctgtg
tctgcccgcctcaggcccttcgccttctcccagagcactcccatcgggctggaccgcgtg
gggcggcgccggcagatgaaaacatccaatgtctcttcagatggaggtgcggagtcttcg
gccttagtggatgataatggtagtgaggaggacttcagctatgaggagctctgccaggcc
aaccctcgatacctacagccaggcggggaacagctggccatcaatgagctcatcagcgat
ggcagcgtggtctgtgcagaagcactgtgggaccatgtgaccatggacgaccaggaactg
ggcttcaaggctggggatgttatccaggtcctggaagcctccaacaaggactggtggtgg
ggccggaatgaaaacaaagaggcctggttccctgccagctttgttaggcttcgagtcaat
caggaggagctgcctgagagctgcagcagctcccacggggaggagcaggagcaggagacc
agcaaagcccgccacaagcaccccgagagccagcagcagatgcggaccaacgtcatccag
gagatcatgaacaccgagcgagtatatatcaagcacctcaaagacatctgtgagggctat
atccgacagtgtcgtaagcacaccggaatgttcaccagtgcgcagctcgccactattttt
ggaaacattgaagacatttacaaattccaaagaaagtttctgaaagaccttgagaaacag
tacaacaaagaggaacctcacttaagtgaaataggatcctgctttcttcagcaccaagag
ggctttgccatctactctgagtactgcaacaaccacccgggcgcctgtgtggagctgtcc
aacctcatgaagcacagcaagtacaggcacttcttcgaggcctgccgcctgctgcagcag
atgatcgacatcgccctggacggcttcctcctcacgcccgtgcagaagatctgcaaatac
ccactgcagctggctgagctgctcaagtacaccacacaggagcacggcgattacgacgac
ataaaggcagcctatgaagccatgaagaacgtggcctgcttgatcaatgagcgcaagcgc
aagctggagagcatagacaagatcgcccgctggcaggtggccatcgtgggctgggagggc
ctggacattctagaccgaagctctgagttgattcattccggagaactgaccaaaatcacc
aggcagggcaagagccagcagcgcatcttcttccttttcgaccaccagctagtgtcctgc
aagaaggacctgctgcgcagggacatgctgtactacaagggccgcatggacatggatgag
gtggagcttgtggatgtagaggatgggcgggacaaagactggaacctaagcatgcgcaat
gccttcaagttggtcagcaaggccacggatgaagttcatctcttctgtgccagaaagcaa
gaagacaaggccaggtggctgcaggcctacgcggacgagaggcgacgggtgcaggaggac
cagcagatgggaatggagatcccagaaaatcagaagaaactcgctatgttgaatgctcag
aaggcaggacatgggaaatctaaaggctacaacagctgccccgtggccccgccccaccag
agcctgccgccccttcaccagcgccacatcactgtgcccaccagcatcccacagcagcag
gtctttgctttggctgagcccaagaggaagccatcactcttctggcacaccttccacaaa
ctcactcccttccggaaatga
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