Apodemus sylvaticus (European woodmouse): 127691607
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Entry
127691607 CDS
T10613
Symbol
Chd8
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 8 isoform X1
KO
K04494
chromodomain helicase DNA binding protein 8 [EC:5.6.2.-]
Organism
asyl Apodemus sylvaticus (European woodmouse)
Pathway
asyl04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
asyl00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
127691607 (Chd8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
asyl03036
]
127691607 (Chd8)
Chromosome and associated proteins [BR:
asyl03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
127691607 (Chd8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
Helicase_C
Chromo
BRK
ResIII
DEAD
HDA2-3
HTH_Hrp3
MUN
Myb_DNA-bind_7
Motif
Other DBs
NCBI-GeneID:
127691607
NCBI-ProteinID:
XP_052047502
LinkDB
All DBs
Position
8:74900191..74960656
Genome browser
AA seq
2586 aa
AA seq
DB search
MADPIMDLFDDPNLFGLDSLTDDSFNQVTQDPIEEALGLPSSLDSLDQMNQDGGGGDVGN
SSASDLVPPPEETAPTELPKESTAPAPESLTLHDYTTQPTSQEQPAQPVLQTSTPTSGLL
QVSKSQEILSQGNPFMGVSATGVSTSNTGGQPSQSAPKIVILKAPPNSSVTGAHVAQIQA
QGITSTAQPLVAGTANGGKVTFTKVLTGTPLRPGVSIVSGNTVLATKVPGNQAAVQRIVQ
PSRPVKQLVLQPVKGSAPAGNPGATGPPLKPAVTLTSTPTQGESKRITLVLQQPQSGGPQ
GHRHVVLGSLPGKIVLQGNQLAALTQAKNAQGQPAKVVTIQLQVQQPQQKIQIVPQPPSS
QPQPQPPPSAQPLTLSSVQQAQIMGPGQNPGQRLSVPLKMVLQPQAGSSQGASSGLSVVK
VLSASEVAALSSPASCTPHTAGKTGMEENRRLEHQKKQEKANRIVAEAIARARARGEQNI
PRVLNEDELPSVRPEEEGEKKRRKKSSGERLKEEKPKKSKTAAASKTKGKSKLNTITPVV
GKKRKRNTSSDNSDVEVMPAQSPREDEESSIQKRRSNRQVKRKKYTEDLDIKITDDEEEE
EVDVTGPIKPEPILPEPVQEPDGETLPSMQFFVENPSEEDAAIVDKVLSMRVVKKELPSG
QYTEAEEFFVKYKNYSYLHCEWATISQLEKDKRIHQKLKRFKTKMAQMRHFFHEDEEPFN
PDYVEVDRILDESHSVDKDNGEPVIYYLVKWCSLPYEDSTWELKEDVDEGKIREFKRIQS
RHPELKRVNRPQANAWKKLELSHEYKNRNQLREYQLEGVNWLLFNWYNRQNCILADEMGL
GKTIQSIAFLQEVYNVGIHGPFLVIAPLSTITNWEREFNTWTEMNTIVYHGSLASRQMIQ
QYEMYCKDSRGRLIPGAYKFDALITTFEMILSDCPELREIEWRCVIIDEAHRLKNRNCKL
LDSLKHMDLEHKVLLTGTPLQNTVEELFSLLHFLEPSQFPSESEFLKDFGDLKTEEQVQK
LQAILKPMMLRRLKEDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSFLSKGAGHTN
MPNLLNTMMELRKCCNHPYLINGAEEKILMEFREACHIIPQDFHLQAMVRSAGKLVLIDK
LLPKLKAGGHKVLIFSQMVRCLDILEDYLIQRRYLYERIDGRVRGNLRQAAIDRFSKPDS
DRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAVKVYRLITR
NSYEREMFDKASLKLGLDKAVLQSMSGRDGNITGIQQFSKKEIEDLLRKGAYAAIMEEDD
EGSKFCEEDIDQILLRRTTTITIESEGKGSTFAKASFVASENRTDISLDDPNFWQKWAKK
ADLDMDLLNSKNNLVIDTPRVRKQTRHFSTLKDDDLVEFSDLESEDDERPRSRRHDRHHT
YGRTDCFRVEKHLLVYGWGRWRDILSHGRFKRRMTERDVETICRAILVYCLLHYRGDENI
KSFIWDLISPAENGKTKELQNHSVFGVSPFPGLSIPVPRGRKGKKVKSQSTFDIHKADWI
RKYNPDTLFQDESYKKHLKHQCNKVLLRVRMLYYLRQEVIGDQAEKVLGGAIASEIDIWF
PVVDQLEVPTAWWDSEADKSLLIGVFKHGYEKYNTMRADPALCFLEKAGRPDDKAIAAEH
RVLDNFSDLVEGIDFDKDCEDPEYKPLQGPPKDPDDEGDPLMMMDEEISVIDGDEAQVTQ
QPGHLFWPPGSALTARLRRLVTAYQRSYKREQMKIEAAERGDRRRRRCEAAFKLKEIARR
EKQQRWTRREQTDFYRVVSTFGVEYDPDNMQFHWDRFRTFARLDKKTDESLTKYFHGFVA
MCRQVCRLPPAAGDEPPDPNLFIEPITEERASRTLYRIELLRRLREQVLCHPLLEDRLAL
CQPPGLELPKWWEPVRHDGELLRGAARHGVSQTDCNIMQDPDFSFLAARMNYMQNHQAGA
SAASLSRCSTPLLHQQCTSRTASPSPLRPDAPVEKSPEESAVQVPSLESLTLKLEDEVVA
RSRLTPQDYEMRVASSDAASLSRNVPPVKLEDEDDSDSELDLSKLSPSSSSSSSSSSSSS
STDESEDEKEEKLTADRSRPKLYDEESLLSLTMSQDGFPNEDGEQMTPELLLLQERQRAS
EWPKDRVLINRIDLVCQAVLSGKWPNRRSQEMTTGGSLGPGNHLLDSPSLTPGEYGDSPV
PTPRSSSAASMVEEEASAVTTAAAQFTKLRRGMDEKEFTVQIKDEEGLKLTFQKHRLMAN
GVMGDGHPLFHKKKGNRKKLVELEVECMEEPNHLDLDLETRIPVINKVDGTLLVGDEAPR
RAELEMWLQGHPEFAVDPRFLAYMEERRKQKWQRCKKNNKAELNCLGMEPVQTANSRNGK
KGHYAETAFNRVLPGPIAPENSKKRVRRTRPDLSKMMALMQGGSTGPLSLHNTFQHSSSN
LQSVSSLGHSSATSASLPFMPFVMGGAAASPHVDSSTMLHHHHHPHPHHHHHHHPGLRTT
GYPSPATTTSGTSLRLPTLQHEDDDEEEDEDDDDLSQGYDSSERDFSLIDDPMMPANSDS
SEDADD
NT seq
7761 nt
NT seq
+upstream
nt +downstream
nt
atggcagaccccatcatggatctgtttgatgacccaaacttatttggcctggactctctg
actgatgacagctttaatcaggtcactcaagaccccattgaagaagcccttggactgcca
agttctctggactccttggatcagatgaaccaagatggtggaggtggtgatgtggggaat
tcatcagcaagtgacctggttcctccaccagaggaaacagctcccactgaacttcccaaa
gaatccacagctccagctccagaatccttaaccttgcatgattataccactcagcccacc
agccaggagcagccagcccaacctgtcttgcagacatcaacaccaacatcaggacttttg
caggtctccaagagccaggagatcttgagccaagggaatcctttcatgggtgtttctgcc
acaggtgtctccaccagtaatactggaggacaaccatctcagtcagctcctaagattgtc
attcttaaagctccaccaaactcctcggtcacaggtgcccatgtggcacaaattcaggcc
caaggtatcaccagtacagctcagcccctagtggctgggaccgccaatggtggaaaagtc
acttttaccaaagtgctgactggtacaccccttcgaccaggtgtatccattgtctctggt
aatacagtgttggccacgaaggtccctgggaaccaggctgctgttcagcgcattgtccag
ccaagccgaccagtaaagcagctagtcctccagccagttaagggttcagctcctgctgga
aatcctggggctaccgggcccccactgaagcctgcagttacactgacatctacacctacc
cagggtgaatcaaaacgcatcactttggtccttcaacagccacagtccggaggtccccaa
ggacatcggcatgttgtgttagggagtctaccaggcaagatagtgttacagggcaaccag
ctagcagccttgactcaagccaagaatgcccaggggcagcctgccaaagtagtaactatt
caactgcaggtgcagcagccacagcaaaaaatccagattgtaccacaacctccatcatca
cagccacaaccacagccgccaccctcagcacagccattgaccctgtcctctgtgcagcag
gctcaaataatgggaccaggccaaaacccagggcagagactttccgtaccgctcaagatg
gtgctgcagccacaggctggttcttctcagggagcttcttctggactctctgtggttaaa
gttctaagtgccagtgaagtggcagccctgtcatcaccagcaagctgtacccctcacact
gcagggaagactggaatggaggagaatcgcaggcttgagcaccagaaaaagcaagagaaa
gcaaatcggattgtggcagaagccattgctagggcccgggccaggggtgagcagaacata
cctcgggtcctgaatgaggatgagctgcctagtgtccggccagaggaggagggtgagaag
aaacgtaggaagaaaagcagtggagaacggctgaaggaggagaagccgaagaagagcaag
actgcagctgcctccaaaacgaagggcaagagtaagctaaacaccatcactcctgtagtg
ggcaagaagagaaagcgtaacacatcgtctgacaactctgatgtggaagtcatgcctgca
cagtcgccccgcgaggatgaagagagcagcatccagaagagacgctcaaaccgacaagtt
aagcgaaaaaaatatacagaggacctggatattaagataacagatgatgaagaggaggag
gaagtcgatgtaactggtccaataaaacctgagcccatcctcccagaaccagtgcaagag
cctgatggcgagactctgccttccatgcagttctttgtggagaatcccagtgaagaagat
gcagctatagtggacaaagtgctttccatgcgagttgtgaagaaagagcttccttctgga
caatacactgaggccgaggaattctttgtcaagtacaagaactactcctatctgcactgt
gaatgggcaacgatctcccagctggagaaggataagaggatccaccagaaactaaagcgg
ttcaaaacgaaaatggctcagatgagacacttctttcatgaagatgaagagcccttcaat
ccagactacgtagaggtggataggatattggacgagtcccacagtgttgacaaggataat
ggtgagcctgtaatttactacctggtaaaatggtgctctctaccctatgaggacagcacg
tgggagctaaaagaggatgttgatgaaggcaagattcgggaatttaaacggatccagtca
aggcatccagaactcaagagggtgaatcgtccacaggcaaatgcctggaagaaattggag
ttgtcacatgaatataaaaacagaaaccaattacgggaatatcagttagaaggggtcaac
tggctcctctttaattggtataacaggcagaactgcatcctggctgatgagatgggatta
ggcaaaactattcagtcaattgccttcttgcaggaggtatataatgtgggcatccatggt
ccctttttggtcattgctccattgtccaccattactaactgggagcgagaattcaatact
tggacagagatgaacactattgtgtaccatggcagtctggccagccggcagatgattcag
cagtatgaaatgtattgtaaagattcacggggtcgcctcatcccgggtgcatataagttt
gatgccttgatcaccacttttgagatgattttgtcagactgtcctgagcttcgtgaaatt
gaatggcgttgtgttatcattgatgaagcccatcggctgaagaaccgaaattgcaagcta
ctcgatagtcttaagcacatggacctggagcataaagtgttactcacagggacaccatta
caaaatactgtagaggaactgttcagcctacttcatttcttggaaccttctcagttcccc
tcagaatcagaattccttaaggattttggggatctcaagaccgaggagcaggttcaaaag
cttcaggccattctaaagccaatgatgctgagaagactcaaagaggatgttgaaaaaaat
ttggctcccaaacaggaaactattattgaagtagaactaaccaatatccagaagaagtac
tacagagctattttagagaagaatttctccttcctttccaaaggggcagggcataccaat
atgcctaatctactcaacacgatgatggagttacgcaagtgctgcaaccacccatacctc
atcaacggcgcagaagagaaaatcctgatggaatttcgggaagcttgccatattatacct
caagatttccacctgcaggccatggttcgatcagctggcaagttagttcttattgacaag
ttacttccaaagcttaaagctggtggccataaagttctgatcttctcccagatggtacgc
tgtctagatattctggaggattatctgatccagaggaggtacttatatgaacgtattgac
gggcgagttagaggcaaccttcgacaagctgctattgaccgctttagtaagcctgactca
gaccgctttgtcttcttgctgtgtacccgtgctggtggacttggtattaatcttacagct
gctgatacctgtattatatttgattcagactggaatccacagaatgacctgcaggcccaa
gcacgttgtcatcgaattggacagagcaaagctgtgaaggtgtaccgactcatcactcgt
aattcctatgagagagaaatgtttgataaagctagcctcaaattgggattggataaagct
gtgcttcaatccatgagtggtcgggatggaaacattactggaattcaacagttctccaag
aaagagattgaagatctcttaaggaaaggcgcatatgcggccataatggaggaagacgat
gagggttctaagttttgtgaagaggacatagatcagatcttgctgagacggaccacaacc
atcactattgagtctgaagggaaagggtctacttttgccaaggcaagctttgttgcttct
gaaaataggacagatatttccctggatgatccaaacttttggcaaaaatgggccaaaaag
gcagacctagacatggacctgctgaatagtaagaataacttagtgattgacacacctcga
gttcggaaacagactagacactttagcactctgaaagatgatgacctggttgagttttct
gatttggaaagtgaagatgatgaacggccgcgttcccgaagacatgaccgccatcacacc
tatgggcgcactgactgttttcgggtagaaaaacatctcctggtatatggttgggggcgt
tggagagatattttgtctcatggacgatttaagcggcgcatgactgaaagagatgtggag
acaatatgccgtgccatccttgtatactgtcttctacactaccgtggggatgaaaacatc
aaaagcttcatttgggacttgatcagccctgctgaaaatggcaagacaaaagaattgcag
aatcattcagtctttggtgtctccccttttccaggtctgtctatccctgtgccccgtggg
cgtaaggggaaaaaagttaagtcacaaagtacttttgacattcataaggcagactggatc
cggaaatataaccctgatactctgttccaagatgagagttataagaagcatttgaaacat
cagtgtaacaaggtactgttgagagtacggatgctgtactatctgagacaggaggttatt
ggagaccaagcagagaaggtgttagggggcgccatagccagtgagattgacatatggttc
ccagtggtggatcagctggaggttccaacagcatggtgggatagtgaggctgacaaatcc
ctgctcatcggtgtttttaagcatggctatgagaaatacaataccatgagggcagaccct
gccttgtgcttcctggaaaaggcgggcaggccagatgacaaagccattgcggcggaacat
agagtattggataatttctctgacctagtagaagggattgactttgataaggattgtgaa
gatcctgaatataaacccctccagggtcccccaaaggacccagatgatgagggtgatccc
ttgatgatgatggatgaggagatctcagtcattgatggagatgaagcccaggtgactcaa
cagccagggcatttattctggcctccaggctctgccctcacagctagacttcgccgccta
gtaacagcctatcaacgcagctacaagagagaacaaatgaagatagaggctgcagaacgt
ggggaccggagacgccgacgatgtgaagcagcctttaagctcaaagaaatcgcaaggcgg
gaaaaacaacagcgatggacaaggcgtgagcaaactgatttctatcgagtagtgtctacc
tttggtgtagagtacgaccctgacaacatgcagtttcactgggatcgcttccgcactttt
gctcgcctggacaaaaaaacagatgaaagccttaccaagtacttccatggttttgtggcc
atgtgtcgacaagtgtgccgccttcctccagctgctggtgatgaacctccagatcctaat
ctgttcattgagcccatcactgaagagagagcctcacggactctctaccgcattgaattg
cttcgacgcttacgggaacaagttttatgccacccccttttagaagatcgactggcattg
tgtcagcctccaggtcttgaactgcccaaatggtgggaacctgtccgtcacgatggggag
ctcctacgaggagcagcccgccatggggtgagccaaacagactgcaacatcatgcaggac
ccagacttctcttttctggctgcccgtatgaattatatgcagaaccatcaggcaggagca
tcagctgcatccctgtcaagatgctccactccactgctgcaccagcagtgtacctcacgt
actgcttcaccatcacccctgcgtccagatgctcctgttgaaaagtcacccgaggagagt
gctgttcaggtccccagtctggagagtctgactttaaagctagaggatgaggtggtggct
aggagccgactcaccccacaagactatgaaatgcgtgtagcctcttcagatgcagcctct
ctgtcccggaatgttccaccagtcaagctggaggatgaggatgattcagactctgagctg
gacttgagcaagttgtcaccatcatcctcttcttcttcatcttcatccagctccagctcc
agcactgatgagagtgaagatgagaaggaagagaagttaactgctgaccggtcccgccca
aagctctatgatgaagagagccttctgtcccttactatgtcccaagatggattcccgaat
gaagatggagaacaaatgacccctgagttgctgctgctgcaggaaagacaaagagcctct
gaatggcccaaggatcgtgttctgataaaccgcattgacctcgtctgccaggctgtactc
tcagggaaatggcctaaccgccggagccaggaaatgacaacaggaggaagtttggggcca
ggcaaccatttattagacagtccttctttgaccccaggagaatatggggactcccctgtc
cccacaccacgaagtagcagtgcagcttccatggtagaggaagaagcatctgcagtcacc
acagcagcagcccagtttacgaaacttcggcgaggcatggatgagaaagagtttacggtt
cagatcaaagatgaagaaggattgaagttaacattccagaagcatagattgatggctaat
ggtgtaatgggagatggacatccactgtttcataagaagaaggggaacaggaaaaagcta
gtagagctggaggtggagtgcatggaagagcccaatcaccttgatctggacctggagacc
cggatccctgtcatcaataaggtggatggtactttgctggtgggtgatgaggcccctcgc
cgggcggagctggagatgtggttacagggtcatccagagtttgctgttgatccccgattt
ctagcgtatatggaggaacgtagaaaacagaagtggcaaagatgtaaaaaaaacaataag
gcagaattgaactgtttgggaatggaaccagtacaaacagccaactctagaaatgggaaa
aagggtcactatgctgaaactgcgttcaaccgggttttgccagggcctattgcaccagag
aacagcaagaaacgggtccgtaggacaaggccagacctttctaagatgatggccctgatg
cagggtggaagcactgggcccctatctctgcataacacctttcaacacagcagtagtaac
ctacagtctgtgtcgtctctgggtcacagcagtgccacctctgcatctctgccttttatg
ccgtttgtgatgggtggtgcagcggcgtcccctcatgtagactccagcaccatgcttcat
caccaccaccacccccacccccaccatcaccaccatcaccacccaggcttgagaaccact
ggctacccttcaccagctactaccacctctggtacttccttacggttaccaacactgcag
catgaggacgatgatgaagaggaggacgaagatgatgatgatttatctcagggctatgat
agctcagaaagggacttctcactcattgatgaccctatgatgccagccaactcagactcc
agtgaagatgctgacgactga
DBGET
integrated database retrieval system
