Apodemus sylvaticus (European woodmouse): 127691878
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Entry
127691878 CDS
T10613
Symbol
Sned1
Name
(RefSeq) sushi, nidogen and EGF-like domain-containing protein 1 isoform X1
KO
K24470
insulin-responsive sequence DNA-binding protein 1
Organism
asyl Apodemus sylvaticus (European woodmouse)
Brite
KEGG Orthology (KO) [BR:
asyl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
asyl04990
]
127691878 (Sned1)
Domain-containing proteins not elsewhere classified [BR:
asyl04990
]
EGF-like domain-containing proteins
hEGF / cEGF domain-containing proteins
127691878 (Sned1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF
hEGF
NIDO
EGF_TEN
fn3
EGF_2
EGF_CA
cEGF
Fn3_Dep-1_4th
Ig_DSCAM-DSCAML_C
EGF_Teneurin
Motif
Other DBs
NCBI-GeneID:
127691878
NCBI-ProteinID:
XP_052047768
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All DBs
Position
9:complement(20689900..20753357)
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AA seq
1403 aa
AA seq
DB search
MRRGAAWALLLAAALGLGARGVRAAVALADFYPFGTKRGDAVTPKQDDGGSGLQPLSVPF
PFFGAEHSGLYVNNNGIISFLKEVSQFTPVAFPIAKDRCVVAAFWADVDNRRAGDVYYRE
ATDPAVLGRATEDIRRYFPELPDFSATWVFVATWYRVTFFGGSSSSPVNTFQTVLITDGR
FSFTIFNYESILWTTGTHASSGGDADGLGGIAAQAGFNAGDGHRYFNIPGSRTADMAEVE
TTTNVGVPGRWAFRIDDAQVRVGGCGHTTSVCLVLRPCLNGGKCIDDCVTGNPSYTCSCL
AGFTGRRCQLDVNECASHPCQNGGTCTHGVNSFSCQCPAGFGGPTCESAQSPCDNKVCQN
GGQCQAESSSAVCVCQVGYTGATCETDVNECSSDPCLNGGSCVDLVGNYSCICVEPFEGP
QCETGSSLVPSPCLSNPCQNGGTCVDADEGYVCECPEGFMGLDCRERILSDCDCRNGGRC
LGANTTLCQCPPGFFGLLCEFEVTATPCNMNTQCPDGGYCMEYGGSYLCVCHTDHNISHS
LPSPCDSDPCFNGGSCDAHEDSYTCECPRGFHGRHCEKARPHLCSSGPCRNGGTCKELGD
EYRCTCPYRFTGRHCEIGKPDSCASGPCHNGGTCFHYIGKYKCDCPPGFSGRHCEIAPSP
CFRNPCMNGGACEDLGTDFSCHCQPGYTGHRCQAEVDCGHPEGVKHATMRFNGTHMGSVA
LYTCDPGFTLSALSHMRVCQPQGVWSQPPQCIEVDECRSQPCLHGGSCQDLTAGYQCLCS
PGYEGVHCELETDECQAQPCRNGGSCRDLPGAFICQCPEGFVGIHCETEVDACASSPCQH
GGRCEDGGGAYLCVCPEGFFGYNCETVSDPCFSSPCGGRGYCLASNGSHSCTCKVGYTGK
DCTKELLPPTALRVERVEESGVSISWSPPEGTAARQVLDGYAVTYASSDGSSRRTDFVDR
SRSSHQLRALAAGRAYNISVFSVKRNTNNKNDISRPAALLTRTRPRPIEDFEVTNISANA
ISVQWALHRIQHATVSRVRVSILYPEASTVQSTEVDRSVDHLTLGDLLPGRRYSVRLTTL
SGPGGAEYPTESLASAPLSVWTRPLPPANLTASRVTATSAHMVWDTPAPGISLEAYVINV
TTSQSTKSRYIPNGKLVSYTVRDLMPGRRYQLSVTAVQSTEQGQLHSEPAHLYIITSPRD
GTDRRWHQGGHHSRILRNRPAPVRLPELRLLSDHSAPETPTQPPRFSELVDGRGRVSARF
GGLPSRAVTVRSQPTTPVPLENTEAPEQLRLALQLPGDSSKDTRSTPGSCSEDTCQNGGT
CVPDASAHSCDCRPGFKGRHCELACEKVPRPCTRLFSETKSFPVWEGDVCHHVYKKVYKV
HQDVCFKERCQSTSLKKPKQETK
NT seq
4212 nt
NT seq
+upstream
nt +downstream
nt
atgcgccgcggcgccgcctgggcgctgctgctggccgcagccctggggctcggggcgcgc
ggggtgcgcgctgcggtggccctcgccgacttctacccgttcggcacgaaacgcggcgac
gccgtcacgccgaagcaggacgacggtggctcagggctgcagcccctctcggtgcccttc
ccgttcttcggcgccgagcactccggactctacgtgaacaataacgggatcatctccttc
ctgaaggaagtttctcagttcacccccgtggccttccccatcgccaaagaccgctgtgtg
gtagcagccttctgggcagatgtggacaaccgacgtgcaggtgacgtctactaccgggag
gccaccgacccagctgtgctcggcagagccacggaggacatcagacggtactttcctgag
ctcccggacttctctgctacctgggtctttgttgccacctggtaccgtgtcaccttcttt
ggaggcagcagttcttcccccgttaacacattccaaactgtgctcatcaccgacggccgg
ttctccttcaccatcttcaactatgagtccatcttgtggactacaggcacacacgccagc
agcgggggtgatgctgatggattgggaggcattgcagcccaggcaggtttcaacgcaggt
gatgggcaccgctacttcaacatccccgggtcgcgcacagcagacatggctgaggtggag
accaccaccaacgtgggcgtgcccggccgctgggcgtttagaatcgatgatgcccaggtg
cgcgtggggggctgcggccatacaacctctgtgtgcctggtcctgcgtccgtgcctcaat
ggtggcaagtgcattgatgactgtgtcaccggcaacccctcctatacctgttcctgtctc
gctggcttcacaggccggagatgccagctagatgtgaacgagtgtgcttcccacccctgt
cagaatggtgggacctgcacccatggcgtcaacagcttcagctgccagtgcccagccggc
ttcgggggaccaacctgtgaatctgcccagtctccgtgtgacaacaaagtgtgtcaaaat
ggtggccagtgccaggcagagagcagctctgcagtatgtgtgtgtcaggtcggatacact
ggggccacctgtgagacagatgtgaatgaatgcagctctgacccatgcctgaatggggga
tcgtgtgtcgaccttgttgggaactacagctgcatttgtgtggagcccttcgagggacct
cagtgtgagacaggaagctccctggtgccttcgccctgcctctccaacccctgccagaac
gggggcacctgtgtggacgctgacgagggatacgtgtgcgaatgccctgaaggtttcatg
ggcttggactgcagagagagaatcctcagtgactgcgattgccggaacggaggcagatgc
ctcggtgccaacaccaccctctgccagtgtcctccaggtttctttgggctcctctgtgaa
tttgaagtcacagccacaccctgcaacatgaacacgcaatgtccagatggaggctactgc
atggagtatggcggaagctacctatgtgtctgccacacagaccacaacatcagccactct
ctgccatcgccctgcgactcagacccttgctttaatggaggttcctgtgacgcccacgag
gactcctacacgtgcgagtgccctcgtggattccatggcaggcactgcgagaaagcccgg
ccacacctgtgcagctcggggccctgccggaatggaggcacatgcaaggagctgggcgac
gagtaccgctgcacctgcccttatcgattcactgggaggcactgtgagattggaaagcca
gactcctgtgcctctggcccctgtcataatggtggcacttgcttccactacattggcaaa
tacaagtgtgactgccctccgggcttctcgggacgacactgtgagatagcaccctcaccc
tgcttccggaacccatgcatgaacggaggtgcctgtgaggatctgggaacagatttctcc
tgccactgccaaccagggtacacaggacaccggtgtcaggcagaggtggactgtggtcac
cctgagggggtgaagcatgctactatgcgcttcaacggaactcacatgggctccgtggcc
ctgtacacgtgtgaccccggctttaccctgagtgccctcagccatatgcgtgtctgtcag
ccgcaaggtgtctggagccagcctcctcagtgcattgaagtggacgagtgccgctctcag
ccatgtctgcatggaggctcctgccaggacctcactgctggttaccagtgcctctgcagc
ccggggtatgaaggtgtccactgtgaactggagacagacgagtgccaagcacagccctgc
agaaatggcggctcctgcagggacctgcctggggctttcatctgccagtgccctgaaggt
tttgttggaatccactgtgaaacagaggtggatgcctgtgcctccagcccctgccagcac
ggaggccggtgtgaggacggaggtggggcctacctgtgcgtgtgtccagagggcttcttc
ggctacaactgtgagacagtgagtgacccctgcttctctagcccctgtgggggccgcggt
tactgcttggctagcaacgggtcccacagctgtacctgcaaagtgggctacacaggcaag
gactgcaccaaagagctcctcccacccacagccctcagggtagagagggtggaggagagt
ggggtctccatctcctggagcccacctgagggcaccgcggccaggcaggtactggacggc
tatgcggtcacctatgcctcctcggacggatcgtcccggcgcacagactttgtggaccgc
agccgctcctctcaccagctccgggccctagcagccggccgcgcctacaatatctccgtt
ttctcagtcaagagaaacacaaacaacaagaatgacatcagcagacctgcagcgctgctc
acccgcacccgaccccgccctatagaagactttgaggtcaccaacatttcagccaatgcc
atctcagtgcagtgggctcttcacaggatccagcatgccaccgtcagtagagtccgagtg
tccatcctctaccccgaggcctctacggtccagtccactgaggtggacaggagtgtggac
catctcacacttggggacctgctgccagggagaagatacagtgtgcggctaaccaccctc
agtgggcctggaggagctgaatatcctacggagagcctggcttcagctccgctgagcgtg
tggacccggcctttgcccccggcaaacctgactgcctctcgagtcacagccacctctgct
catatggtctgggacacccctgctccaggtatctcactggaggcttatgtcatcaatgtg
accaccagtcagagtaccaagagccgctacatccccaacgggaagctggtgtcctatacg
gtgcgtgatctgatgccaggccggcggtaccagctctcagtcacagctgtgcagagcaca
gagcagggccagctgcacagtgaacctgcgcacctctacatcatcacctcccccagggat
ggcaccgacagacgctggcaccagggaggacaccactcacggatacttagaaatagacca
gcccccgtgcgcctgccagagctacgcctgctcagtgaccacagtgcccctgaaacacca
actcagccacccaggttctcagagctggtagacggaagaggaagagtgagtgccaggttt
ggtggcttgcccagcagagcagtaactgtgagatcacaacccaccactccggtgccactc
gagaacacagaggcccccgagcagctccgtctggccctccagctgcctggggacagcagc
aaagacaccagaagtacccctggcagctgttcagaagatacctgtcagaatggaggcacc
tgtgtcccagatgccagtgcccacagctgtgactgcaggcctgggttcaaaggcagacac
tgtgagcttgcctgtgaaaaagtgccccgcccctgcacacggctgttctcggagaccaag
tcattccctgtctgggaaggagatgtctgtcaccatgtgtataagaaagtctacaaagtt
caccaggacgtgtgctttaaggagcgctgccagagcacaagcctcaagaaacccaaacag
gaaacaaagtaa
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