Apodemus sylvaticus (European woodmouse): 127691918
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Entry
127691918 CDS
T10613
Symbol
Syvn1
Name
(RefSeq) E3 ubiquitin-protein ligase synoviolin isoform X1
KO
K10601
E3 ubiquitin-protein ligase synoviolin [EC:
2.3.2.27
]
Organism
asyl Apodemus sylvaticus (European woodmouse)
Pathway
asyl04120
Ubiquitin mediated proteolysis
asyl04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
asyl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
127691918 (Syvn1)
04120 Ubiquitin mediated proteolysis
127691918 (Syvn1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
asyl04121
]
127691918 (Syvn1)
Enzymes [BR:
asyl01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
127691918 (Syvn1)
Ubiquitin system [BR:
asyl04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
127691918 (Syvn1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4
zf-rbx1
zf-C3HC4_2
zf-RING_UBOX
zf-C3HC4_3
zf-RING_16
zf-RING_11
zf-RING_5
zf-ANAPC11
zf-RING-like
zf-HC5HC2H
zf-Nse
zf-C3H2C3
Endonuclease_7
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
127691918
NCBI-ProteinID:
XP_052047797
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All DBs
Position
1:complement(56903805..56910912)
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AA seq
647 aa
AA seq
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MAGDLRRRRGHRSRGRARLRGSQLLVFTGLWARAMFRTAVMMAASLALTGAVVAHAYYLK
HQFYPTVVYLTKSSPSMAVLYIQAFVLVFLLGKVMGKVFFGQLRAAEMEHLLERSWYAVT
ETCLAFTVFRDDFSPRFVALFTLLLFLKCFHWLAEDRVDFMERSPNISWLFHCRIVSLMF
LLGILDFLFVSHAYHSILTRGASVQLVFGFEYAILMTMVLTIFIKYVLHSVDLQSENPWD
NKAVYMLYTELFTGFIKVLLYMAFMTIMIKVHTFPLFAIRPMYLAMRQFKKAVTDAIMSR
RAIRNMNTLYPDATPEELQAMDNVCIICREEMVTGAKRLPCNHIFHTSCLRSWFQRQQTC
PTCRMDVLRASLPAQSPPPPEPADQGPPPAPHPQPLLPQPPNFPQGLLPPFPPGMFPLWP
PMGPFPPVPPPPSSGEAAAPPSTSAAVSRPSGAATTTAAGPSTSAPASGSVPGPEAGPAP
GFPFPPPWMGMPLPPPFAFPPMPVPPAGFAGLTPEELRALEGHERQHLEARLQSLRNIHT
LLDAAMLQINQYLTVLASLGPPRPATSVNPTEETASPVVSAAPSAPSAPSSEAPAPSPGA
SPPIPEAEKPPAPESVGTAEDLPEDGEPDAAELRRRRLQKLESPVAH
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
atggctggagacctcaggcggcggcgcggccaccgttccagaggccgggcccgtctgcga
ggttcgcaactcctagtgttcacaggtctctgggccagggcaatgttccgcaccgcagtg
atgatggcggccagcctggcactgaccggggcagtggtggctcacgcctactacctcaaa
caccagttctaccccactgtcgtgtatttgaccaagtccagccccagcatggcagtcctg
tacatccaggcctttgtccttgtcttcctcttgggcaaggtgatgggcaaggtgttcttt
gggcagctgagggcagcagagatggagcaccttctggagcggtcctggtacgctgtcact
gagacttgtttggccttcactgtttttcgggatgacttcagccctcgttttgtggcactc
tttacactccttctcttcctcaaatgtttccactggttggcagaagaccgcgtggacttt
atggaacgcagccccaacatctcctggctcttccactgccgcattgtctctcttatgttt
ctcctgggtatcctggatttcctcttcgtcagccacgcttatcatagcatcctgacccgt
ggggcttctgtgcagctggtatttggctttgagtatgccattctgatgaccatggtgctt
accatcttcatcaagtatgttctgcactctgtggacctccagagcgaaaacccctgggac
aacaaggctgtgtatatgctctacacggagctgtttacaggctttatcaaggtcctgttg
tacatggccttcatgaccatcatgatcaaggtgcacaccttcccgctctttgccattagg
cccatgtacctggccatgaggcagttcaagaaagctgtgacagatgccatcatgtctcgc
cgagccatccgcaacatgaacacactgtacccagacgccacccccgaggaactccaggca
atggataatgtgtgtatcatctgcagagaagaaatggtgaccggtgctaagagattgcct
tgtaaccacatctttcacacgagctgcctgcgctcctggttccagagacagcagacctgc
ccgacatgccgtatggatgtcctacgggcatccttgccagcccagtccccaccaccccct
gagcctgctgaccaaggaccacctcctgcccctcatccccaaccactgctgccacagccc
cctaatttcccccagggcctcctgcctccatttcctcccggcatgttcccgctgtggcca
ccaatgggtccctttccacctgtcccacctcccccaagctcaggagaggctgcagcccct
ccatccaccagtgcagccgtttctcgacccagtggagcagccaccaccacagctgctggc
cccagtacttctgccccagcatctggctctgtacctggcccagaggctggccctgccccc
ggcttccctttccctcctccttggatgggtatgcctctgcctccaccttttgccttcccc
ccaatgcctgtgccccctgcgggctttgctggcctgactccagaggagctgcgtgcgcta
gagggccatgagcggcagcacctggaggcccggctacagagtctgcgcaacatacacaca
ctactggatgctgccatgctgcaaatcaatcagtacctcactgtgctggcctccctgggg
ccccccaggccagctacttcagtgaaccccactgaagagactgcctctccagtggtatct
gctgcccccagcgcccccagcgcccccagctctgaggctcctgccccatctccaggagct
tccccaccgattccggaagctgagaagcctcctgctcctgagtcagtgggcactgcagag
gacctccctgaagatggagagcctgatgctgcagaactccgccggcgtcgcctgcagaag
ctcgaatcccccgtcgcccactga
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