Apodemus sylvaticus (European woodmouse): 127691976
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Entry
127691976 CDS
T10613
Symbol
Capn1
Name
(RefSeq) calpain-1 catalytic subunit isoform X1
KO
K01367
calpain-1 [EC:
3.4.22.52
]
Organism
asyl Apodemus sylvaticus (European woodmouse)
Pathway
asyl04141
Protein processing in endoplasmic reticulum
asyl04210
Apoptosis
asyl04217
Necroptosis
asyl04218
Cellular senescence
asyl04382
Cornified envelope formation
asyl05010
Alzheimer disease
asyl05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
asyl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
127691976 (Capn1)
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
127691976 (Capn1)
04217 Necroptosis
127691976 (Capn1)
04218 Cellular senescence
127691976 (Capn1)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
127691976 (Capn1)
09160 Human Diseases
09164 Neurodegenerative disease
05010 Alzheimer disease
127691976 (Capn1)
05022 Pathways of neurodegeneration - multiple diseases
127691976 (Capn1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
asyl01002
]
127691976 (Capn1)
Enzymes [BR:
asyl01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.22 Cysteine endopeptidases
3.4.22.52 calpain-1
127691976 (Capn1)
Peptidases and inhibitors [BR:
asyl01002
]
Cysteine peptidases
Family C2: calpain family
127691976 (Capn1)
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SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Peptidase_C2
Calpain_III
EF-hand_6
EF-hand_1
EF-hand_8
EF-hand_7
CAPN13-like_C_EFh
Motif
Other DBs
NCBI-GeneID:
127691976
NCBI-ProteinID:
XP_052047827
LinkDB
All DBs
Position
1:56954967..56980990
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AA seq
713 aa
AA seq
DB search
MAEELITPVYCTGVSAQVQKKRDKELGLGRHENAIKYLGQDYEKLRASCLQSGVLFQDEA
FPPVSHSLGFKELGPHSSKTYGIKWKRPTELLSNPQFIVDGATRTDICQGALGDCWLLAA
IASLTLNETILHRVVPYGQSFQNGYAGIFHFQLWQFGEWVDVVVDDLLPTKDGKLVFVHS
AQGNEFWSALLEKAYAKVNGSYEALSGGCTSEAFEDFTGGVTEWYDLQKAPSDLYQIILK
ALERGSLLGCSINISDIRDLEAITFKNLVRGHAYSVTDAKQVTYQGQRVNLIRMRNPWGE
VEWKGPWSDNSYEWNKVDPYEREQLRVKMEDGEFWMSFRDFIREFTKLEICNLTPDALKS
RTLRNWNTTFYEGTWRRGSTAGGCRNYPNTFWVNPQFKIRLEEVDDADDYDNRESGCSFL
LALMQKHRRRERRFGRDMETIGFAVYQVPRELAGQPVHLKRDFFLANASRAQSEHFINLR
EVSNRIRLPPGEYIVVPSTFEPNKEGDFLLRFFSEKKAGTQELDDQIQANLPDEKVLSEE
EIDDNFKTLFSKLAGDDMEISVKELQTILNRIISKHKDLRTNGFSLESCRSMVNLMDRDG
NGKLGLVEFNILWNRIRNYLTIFRKFDLDKSGSMSAYEMRMAIEAAGFKLNKKLHELIIT
RYSEPDLAVDFDNFVCCLVRLETMFRFFKILDTDLDGVVTFDLFKWLQLTMFA
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
atggcagaggagttaatcacgcctgtgtactgcaccggggtgtcagcccaagtgcagaag
aaacgggacaaggagctgggcttgggccgccatgaaaacgccattaagtacctgggccag
gattatgaaaagctgcgggcgagttgcctgcagagcggggtcctcttccaagacgaggcc
ttccctccggtttcccatagcctgggcttcaaagaactgggtccccattcctctaaaacc
tatggcatcaagtggaagcgtcccacggagctgctgtcaaacccccagttcatcgtggat
ggagccacccggacagacatctgccagggagcactgggggactgttggctcctggccgct
atcgcctccctcaccctcaacgagaccattctgcaccgagtggttccctacggccagagc
tttcagaatggctacgccggcatctttcatttccagctgtggcagttcggggaatgggta
gacgtggtcgtggatgatttgctgcccaccaaggacgggaagctggtgtttgtgcactct
gcccagggcaacgagttctggagtgctctgcttgagaaggcgtatgctaaagtgaacggc
agctacgaggccctttcgggaggctgcacctcagaggcctttgaggacttcaccggtggg
gtcactgagtggtacgacctgcagaaagcacccagcgacctctaccagatcattctaaag
gccctggaacgaggctccctgttgggctgctccattaatatctccgatatccgtgacttg
gaggctatcacttttaagaacctggtgaggggccatgcatactccgtgacggatgccaag
caggtaacttaccagggccagcgagtgaacctaatccggatgcgcaacccgtggggtgaa
gtggagtggaaaggcccctggagtgacaactcctatgagtggaacaaagtggacccctat
gaacgagagcagctgagggtcaagatggaggacggggagttctggatgtccttccgagac
ttcattcgtgagttcaccaaactggaaatctgcaaccttacacccgatgccctcaagagc
cggaccctccggaactggaataccacgttttacgagggtacctggcgccggggaagcact
gccggaggctgccggaactacccaaataccttctgggtaaacccccagttcaagatccgg
ttggaggaggtggatgatgcagacgactatgacaaccgagagtcaggctgcagcttcctg
ttggccctcatgcagaagcaccgtcgcagggagcgtcgctttggccgggacatggagacc
attggttttgcagtgtaccaggtcccccgggagctggcgggtcagcctgtgcacttgaag
cgtgacttcttcctggccaacgcttctcgggcacaatcggagcacttcatcaacctccga
gaggtcagtaaccgcatccgcctgccgcctggggagtacatagtggtgccctccaccttc
gagcccaacaaagagggtgactttctgctgcgcttcttttcagagaagaaggctgggacc
caggaactagatgaccagatccaggccaacctccccgatgagaaagtactctctgaggag
gaaatcgatgacaacttcaaaaccttgttcagcaagttggcaggggatgacatggagatc
agtgttaaggagctacagaccatcctgaacaggatcattagcaaacacaaggacctacgc
actaatggcttcagcctggagtcttgccgcagcatggtgaacctcatggatcgagatggc
aatgggaagctgggcctggtggagttcaacatcctgtggaaccgcatccgaaattacctg
accatcttccggaagtttgacctggacaagtctggcagcatgagtgcctacgagatgagg
atggccattgaggctgcaggcttcaagcttaacaagaagctacatgaactcatcatcacc
cgctactcagagcccgacctggccgtggacttcgacaactttgtgtgctgccttgtgcgg
ctggagaccatgttccggtttttcaaaattctggacacagacctggatggtgttgtgacc
tttgatctatttaagtggctgcagctgactatgtttgcatga
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