KEGG   Apodemus sylvaticus (European woodmouse): 127692225
Entry
127692225         CDS       T10613                                 
Symbol
Col4a3
Name
(RefSeq) collagen alpha-3(IV) chain
  KO
K06237  collagen type IV alpha
Organism
asyl  Apodemus sylvaticus (European woodmouse)
Pathway
asyl04151  PI3K-Akt signaling pathway
asyl04382  Cornified envelope formation
asyl04510  Focal adhesion
asyl04512  ECM-receptor interaction
asyl04518  Integrin signaling
asyl04820  Cytoskeleton in muscle cells
asyl04926  Relaxin signaling pathway
asyl04933  AGE-RAGE signaling pathway in diabetic complications
asyl04974  Protein digestion and absorption
asyl05146  Amoebiasis
asyl05165  Human papillomavirus infection
asyl05200  Pathways in cancer
asyl05222  Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:asyl00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04151 PI3K-Akt signaling pathway
    127692225 (Col4a3)
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    127692225 (Col4a3)
   04518 Integrin signaling
    127692225 (Col4a3)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    127692225 (Col4a3)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    127692225 (Col4a3)
 09150 Organismal Systems
  09152 Endocrine system
   04926 Relaxin signaling pathway
    127692225 (Col4a3)
  09154 Digestive system
   04974 Protein digestion and absorption
    127692225 (Col4a3)
  09158 Development and regeneration
   04382 Cornified envelope formation
    127692225 (Col4a3)
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    127692225 (Col4a3)
  09162 Cancer: specific types
   05222 Small cell lung cancer
    127692225 (Col4a3)
  09172 Infectious disease: viral
   05165 Human papillomavirus infection
    127692225 (Col4a3)
  09174 Infectious disease: parasitic
   05146 Amoebiasis
    127692225 (Col4a3)
  09167 Endocrine and metabolic disease
   04933 AGE-RAGE signaling pathway in diabetic complications
    127692225 (Col4a3)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:asyl04147]
    127692225 (Col4a3)
   00536 Glycosaminoglycan binding proteins [BR:asyl00536]
    127692225 (Col4a3)
Exosome [BR:asyl04147]
 Exosomal proteins
  Exosomal proteins of other cancer cells
   127692225 (Col4a3)
Glycosaminoglycan binding proteins [BR:asyl00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   127692225 (Col4a3)
SSDB
Motif
Pfam: Collagen C4
Other DBs
NCBI-GeneID: 127692225
NCBI-ProteinID: XP_052048329
LinkDB
Position
9
AA seq 1670 aa
MHSETAPRFLALLLPILLLLLAARPVASKGCVCKGKGQCLCAGTKGEKGEKGFPGPPGFP
GQKGFPGPEGLPGPQGPKGSPGLPGLTGPKGIRGITGLPGFAGPPGLPGIPGHPGPPGLA
GLPGCNGSKGEQGFPGIPGTPGYAGLPGPHGLKGQKGEPAQGEDREFNGKGDPGPPGAPG
FQGFPGLPGFPGPAGPPGPPGFFGLPGAMGPRGPKGHMGDYMIGPKGEKGEKGLTGPPGM
PGTVIFTLARPYNKSDFKGEKGDEGERGEPGPPGPSGPPGDSYGSEKGAPGEPGPRGKPG
KDGAPGFPGTEGAKGSRGFPGLRGEAGLKGWKGDVGPPGLPGPTEYYDVYLEKGDKGLPG
PPGPKGARGPQGPSGPPGVPGSPGLSRPGLRGPPGWPGLKGSKGERGPPGKDTMGPPGPL
GCPGSPGPPGQPGPPGRPGDIVFQPGPPGDHGVPGDTGPPGVPGVDGPKGDPGHPCTECH
CFPGPPGVPGLPGLDGVKGVPGGRGAPGMKGNPGSPGSPGLPGFAGFPGDQGHPGLKGHK
GDTPLPWGQVGDPGDPGHRGLPGRKGFDGIPGGPGAKGPPGPRGEPALSGRKGDQGPPGA
PGSPGPPGPAGPAGPPGYGPQGEPGPKGAQGVPGALGPPGEAGLKGEPSTATPVLGPPGP
PGPPGRAGPRGLPGLPGPVGKCGPGLPGPDGEPGIPEVGFPGPPGPKGDQGSPGTKGSPG
CPGEMGKPGRPGEPGFPGAKGEPSVGRPGEPGKPGFPGERGDSGENGDIGFPGLPGLPGT
PGRDGLDGPPGDPGQSGPPGAKGPPGRCTPGPRGPQGLPGLNGLKGQPGRRGDTGPKGDP
GIPGMDRSGVPGEPGPPGTPGHPGEMGPPGQKGYPGAPGFPGPPGEKGEAGIMGYPGTTG
PPGPPGKPGSQGQRGSLGIPGIKGETGLRGAKGERGEKGEPGPPGALHLKGDKGEPGLKG
FVGNPGEKGNRGNPGLPGPKGLEGLPGLPGPPGPRGDTGNSGNPGRPGPRGMPGIMGNMG
VPGPKGRKGMSGLPGLAGRPGLPGSHGPQGDKGEPGYSEGARLGPPGPKGDPGLPGGKGK
KGERGLPGPPGQSGPAGPDGAPGSPGSPGHPGKPGPDGDLGMKGQKGFPGPPGSTGPPGP
PGLPGLPGPMGMRGDQGCDGIPGPPGEKGETGLLGGYPGPKGSPGVPGARGDRGVPGLSG
LPGRKGAMGDVGPQGPPGITGLPGPPGLPGAVVPGPKGNRGLPGLRGDPGEPGPPGPPGP
IGKGIKGDKGFMGPPGPKGLPGTVGDMGPPGHPGAPGTPGLPGVRGDPGFPGFPGIKGEK
GNPGFLGPIGHPGPVGPKGPPGPRGKPGTLKVISLPGSPGPPGAPGQPGMKGDPGPLGPP
GIPGPCGPRGKPGKDGKPGPPGPAGAKGNKGSKGQPGPPGLDGLPGLKGKPGDRGTPATG
TRMRGFIFTRHSQTTANPSCPEGTQPLYSGFSLLFVQGNERAHGQDLGTLGSCLQRFTTM
PFLFCNINNVCNFASRNDYSYWLSTPALMPMDMAPITGRALEPYISRCTVCEAPAMAIAV
HSQTTAIPPCPQGWVSLWKGFSFVMFTSAGSEGAGQALASPGSCLEEFRASPFIECHGRG
TCNYYSNSYSFWLASLNPERMFRKPIPSTVKAGDLETIISRCQVCMKKRH
NT seq 5013 nt   +upstreamnt  +downstreamnt
atgcactcagagactgctccgaggttcttggcgctcctgctgcctatcctgctgctgctt
ctggctgcccggcctgtggctagcaagggctgtgtctgcaaaggcaaagggcaatgcctc
tgcgcggggaccaaaggggagaagggggagaaaggctttcctggaccccctggatttcct
ggacagaaaggatttccaggtcctgaaggcttgcctggaccacagggacccaagggctct
ccaggactcccaggactcactggccccaaaggcatcaggggaataactggattaccagga
tttgcaggtcctcctggacttccaggcatcccaggccaccccgggcctcctgggctggct
ggtttaccaggatgcaacggttctaagggagaacaaggattcccaggcattccaggaaca
ccaggctatgcagggctcccaggtccccatggcttgaaaggacaaaagggtgagcctgct
caaggagaggacagggaattcaatggaaaaggtgaccctgggcctccaggggctccaggc
ttccagggttttccaggactcccaggtttcccagggcctgcgggtccaccaggacctcca
ggattttttggtttgccaggagcgatgggacccagaggacccaaaggtcacatgggcgat
tacatgataggaccaaaaggagaaaagggtgaaaaaggattaacaggacctcctgggatg
ccaggaactgtgatttttacactcgcccgcccatacaacaaatcggacttcaagggagag
aaaggagatgagggcgagaggggtgaacctggacctcctggaccctcggggccacctggg
gactcctatggatcagaaaagggtgctcctggagagcctggccctcggggaaaacctgga
aaagatggtgctcctggcttccctggcactgagggggccaagggcagcaggggctttcct
gggctgaggggtgaagccggccttaagggatggaaaggagacgttggccccccaggatta
cctggtccaacagaatattatgacgtgtacctggaaaagggagataaaggactaccaggc
ccgcctgggcccaaaggagctcgtggcccacaaggtccgagtggtccccctggagttcct
ggaagtcctggactgtcaaggcctggcctcagaggaccccctggatggccaggcttgaaa
ggaagtaaaggagagagaggaccccctggaaaagacactatgggccctcctggacccctg
ggatgtcctggctcaccaggtccaccaggccaaccaggacctccaggacgtccaggagac
attgtttttcagccaggcccaccaggtgaccatggagtgccaggtgatacaggacctcca
ggagttccaggagttgatggacccaaaggagacccaggccatccgtgcaccgagtgtcac
tgcttcccaggaccccctggcgtcccaggacttccaggattagatggtgtcaaaggagtc
ccaggaggacgaggtgctcctggcatgaagggaaacccggggtccccaggaagtccaggt
ctcccaggatttgcaggattcccaggtgaccaagggcatccaggacttaaaggtcacaag
ggggacacacctctaccctgggggcaagtgggtgatcctggggatcctggacacagaggc
ctgccgggaagaaagggcttcgatggaattcctggaggtccaggagcaaaaggaccacca
ggacctaggggtgaaccggccctgagtggaaggaaaggggaccagggacctccaggagct
cctggatcccctggacccccaggacctgcaggaccagctggacccccaggctatggaccc
caaggagagccaggtccaaagggagcccaaggagtccctggagccctgggaccacccgga
gaagccggtcttaaaggagaacccagtactgcaactccagttctagggcccccaggccct
ccagggccccctggtcgggctggccccagaggtctacctggtttgcctggacctgtggga
aaatgtggtcctggccttccggggcctgatggtgaaccaggaattccagaagttggattc
ccagggcctccaggacctaagggcgatcaaggttccccaggaacaaaaggatcccctggt
tgtcctggggaaatgggaaagcctggccgtcctggagagccaggcttcccaggagccaag
ggagaaccatccgtaggcaggcctggggaaccaggaaaaccaggctttccaggagaaaga
ggcgattctggggaaaatggagatattggcttccctgggcttccaggcctccctggaact
ccaggaagagacgggcttgacgggcctccaggagacccaggacagtctggaccacctgga
gcaaaaggacccccaggaaggtgtacaccaggacctaggggaccccaaggacttccaggc
ttgaacggactgaaagggcaaccaggaagaagaggtgatactgggccaaagggagaccct
ggcatcccaggcatggacaggtctggagtccctggagagcctggaccaccgggaacacca
ggtcatccaggggagatgggaccacctggccaaaaaggatatcctggagctccaggattc
ccagggccaccaggcgagaaaggagaggctggaataatgggctatcctggaaccactggc
cctccgggacctcctgggaaaccaggctcacaggggcagagaggtagcctcggaatccca
ggaataaaaggagaaacaggactccggggagccaaaggcgaacgaggcgagaagggagag
cctgggcctcccggagcactacacttaaagggagacaaaggagagcctggacttaaagga
tttgtaggaaatccaggtgaaaaaggaaacagaggcaatccagggttaccaggtccgaaa
ggcctcgagggattgcctggactaccaggccctccaggccctagaggagatacagggaac
agcggaaatcctggaagacccggaccacgcggcatgccaggaatcatggggaacatgggg
gtgccaggccctaaagggagaaaaggaatgtcaggacttccaggtctagctggaagacca
ggcctgcccgggagccatggtccccaaggagataagggggagccaggttattcagaaggt
gcaaggctcggaccaccaggaccaaagggcgatccaggattgccaggtggcaaaggaaag
aaaggagaaagaggcctacctgggccacctggacagtcggggcctgctggacctgatgga
gcccctgggagtcctgggagtcctggccacccaggaaaaccaggtcctgatggtgatttg
ggtatgaaaggacagaaaggcttcccaggccctccaggaagcactggccctccaggccct
ccaggactcccaggacttcctgggccaatgggtatgagaggtgaccaaggatgtgatgga
attcctggtcctccgggagaaaagggagaaacaggcttgctggggggctatccaggccca
aaagggagccctggtgtaccaggggccagaggagacaggggagttccaggcttgtctggc
cttcctggaagaaagggagccatgggggatgttgggcctcaaggacccccaggcatcact
ggactcccaggaccaccgggtctacctggggcagttgtccctggcccaaaaggaaacaga
ggtctccctggcttaagaggagatccaggtgagccaggtccccctggacctccaggacct
attggaaaaggcataaaaggtgacaaaggatttatgggccctcctggccccaaaggtctg
cctggaactgtaggggacatgggcccaccaggtcacccgggagcaccaggtacccctggt
cttcccggtgtcagaggtgatccaggattccccggatttccaggcataaaaggagagaag
ggtaatcctggatttcttgggccaattggacatccaggaccagttgggcccaaaggacca
ccaggtccacgtggaaaacctggcacacttaaggtcatctcccttccgggaagcccaggg
ccacctggtgcacccggacaaccaggaatgaaaggagaccccggacccctgggaccacca
ggaatcccaggaccctgtgggccaagaggtaaaccaggcaaggatgggaaaccaggacct
ccaggaccagctggtgcaaagggcaacaagggctcgaaaggacagccaggtccacctggt
ctggatggattgccaggtttaaagggaaaacctggtgacaggggaacgccggccactggg
acaagaatgcgaggcttcatctttaccagacacagtcaaaccacagccaatccttcatgc
cctgaaggaacacagccactctacagtgggttttctcttctttttgtacaaggaaacgaa
cgcgcccatggacaagaccttggtactctgggcagttgcctacagcgattcaccacaatg
ccattcttattctgtaacatcaataatgtgtgtaattttgcatcacgaaatgattattca
tactggctgtcaacaccagccctgatgccaatggacatggctccaattactggcagggct
ctcgaaccctatattagcagatgcaccgtctgtgaagctcctgcaatggccatagctgtt
cacagtcaaactactgctatccctccctgtccccagggctgggtttctctctggaaaggt
ttttccttcgttatgttcacaagtgcaggctctgagggtgctggacaagcacttgcctcg
cccggctcctgcctggaggaattccgagcgagtccgtttatagaatgccatggacgagga
acttgtaactactactcaaactcctacagtttctggctggcttcactcaacccagaaaga
atgttcagaaaacctattccatcaactgtgaaagctggagacttagagacaattataagc
cgctgtcaggtgtgcatgaagaaaagacattga

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