KEGG   Apodemus sylvaticus (European woodmouse): 127692226
Entry
127692226         CDS       T10613                                 
Symbol
Col4a4
Name
(RefSeq) collagen alpha-4(IV) chain
  KO
K06237  collagen type IV alpha
Organism
asyl  Apodemus sylvaticus (European woodmouse)
Pathway
asyl04151  PI3K-Akt signaling pathway
asyl04382  Cornified envelope formation
asyl04510  Focal adhesion
asyl04512  ECM-receptor interaction
asyl04518  Integrin signaling
asyl04820  Cytoskeleton in muscle cells
asyl04926  Relaxin signaling pathway
asyl04933  AGE-RAGE signaling pathway in diabetic complications
asyl04974  Protein digestion and absorption
asyl05146  Amoebiasis
asyl05165  Human papillomavirus infection
asyl05200  Pathways in cancer
asyl05222  Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:asyl00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04151 PI3K-Akt signaling pathway
    127692226 (Col4a4)
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    127692226 (Col4a4)
   04518 Integrin signaling
    127692226 (Col4a4)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    127692226 (Col4a4)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    127692226 (Col4a4)
 09150 Organismal Systems
  09152 Endocrine system
   04926 Relaxin signaling pathway
    127692226 (Col4a4)
  09154 Digestive system
   04974 Protein digestion and absorption
    127692226 (Col4a4)
  09158 Development and regeneration
   04382 Cornified envelope formation
    127692226 (Col4a4)
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    127692226 (Col4a4)
  09162 Cancer: specific types
   05222 Small cell lung cancer
    127692226 (Col4a4)
  09172 Infectious disease: viral
   05165 Human papillomavirus infection
    127692226 (Col4a4)
  09174 Infectious disease: parasitic
   05146 Amoebiasis
    127692226 (Col4a4)
  09167 Endocrine and metabolic disease
   04933 AGE-RAGE signaling pathway in diabetic complications
    127692226 (Col4a4)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:asyl04147]
    127692226 (Col4a4)
   00536 Glycosaminoglycan binding proteins [BR:asyl00536]
    127692226 (Col4a4)
Exosome [BR:asyl04147]
 Exosomal proteins
  Exosomal proteins of other cancer cells
   127692226 (Col4a4)
Glycosaminoglycan binding proteins [BR:asyl00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   127692226 (Col4a4)
SSDB
Motif
Pfam: Collagen C4
Other DBs
NCBI-GeneID: 127692226
NCBI-ProteinID: XP_052048330
LinkDB
Position
9
AA seq 1682 aa
MRCFFRWIEAFVTAPWSLIFILFTIQYEYGSGKKYGSPCGGRNCSVCQCFPEKGSRGHPG
PLGPQGPIGPLGPPGPIGIPGEKGQRGDGGLPGLPGEKGDKGPTGVPGFPGVDGVPGHPG
PPGPRGKPGVDGYNGSRGDPGYPGERGAPGPGGPPGQPGEKGEKGRSVFISGGFKGIQGD
RGDPGPPGLPGSRGEQGSIGPMGHAGAPGLAGPIGHPGSPGLKGNPATGLKGQRGEPGEV
GQHGPPGPTLLVQPPDLSIYKGEKGVKGIPGAIGLPGPPGHKGEPGIGIKGEKGIPGFPG
PRGEPGSHGSPGFPGFKGIQGAAGDPGMFGFLGPKGDPGDRGYPGPPGISVTPAPPLKGA
PGDPGPPGRYGEIGDVGLPGPPGPPGKPGETCPGMMGPPGPPGVPGPPGFPGEAGVPGRL
DCAPGKPGNPGLPGLPGAPGPEGSPGSDVIYCRPGYPGPMGEKGKMGPPGRRGAKGAKGN
EGLCTCPPGPEGPPGPPGPPGRQGSKGDLGLPGWHGEKGDPGQPGAEGPPGPPGRPGAMG
PPGNKGAKGDMVVSREKGQKGERGLDGPPGFPGPHGQDGRDGRAGERGDPGPRGDHKDAA
PGERGLPGLPGPPGKTGPAGPPGLGFPGPPGQRGLPGEPGRPGMRGFDGMKGQKGDSILC
NVTYPGKPGPPGFDGPPGLKGFPGPPGAPGMRCPDGQKGQRGKPGMSGIPGPPGFRGDMG
DPGIKGEEGTSPIGPPGPPGSPGMDGQRGIPGDPAFGDPGPPGERGLPGAPGMKGQKGYP
GCPGAGGPPGTPGSPGLKGPKGREGSPGLPGIPGSPGHSCERGVPGIPGQQGLPGMPGDP
GAPGWKGQPGDMGPSGPVGMKGLPGLPGLPGADGFRGPPGIPGPTGEDGLPGLPGPKGLP
GLLGFPGFPGERGKSGPDGEHGRKGEVGEKGWPGLRGDPGERGTKGDRGPPGDAGKAVIS
KKGEPGDPGPPGDGGFSGERGDKGSPGMRGGRGDPGRDGPPGLHKGQPGLNGPPGPPGPP
GPPGSPGLRGVIGFPGFPGDQGDPGSPGPPGFSGDDGARGPKGNQGDPASQCGLPGPKGE
PGSPGYQGHTGAPGEKGFPGDDGARGPPGRPGQPGSFGPPGCPGDPGMPGLKGPPGEVGD
PGPRGYAGDVGRPGPAGVKGPPGSPGLNGLHGLKGEKGARGTSGLLEMGPPGPMGMPGQK
GEKGDPGSPGISPPGLPGEKGLPGPPGRPGPPGPAGAPGRAAKGDIPDPGPPGDWGPPGP
DGPRGVPGPPGPPGNVDLLKGDPGDYGFPGPPGSRGPPGPPGCQGPPGCDGKDGQKGPMG
LPGFPGPPGLPGAPGEKGLLGPPGRKGPVGPPGCRGEPGPPADVDSCPRIPGLPGVPGLR
GSEGPMGDPGQRGLPGPGCKGEPGLDGRRGQDGIPGSPGPPGHKGDTGEAGCPGAPGPPG
PTGDPGPKGFGPGYLSGFLLVLHSQTAQEPACPAGMPRLWTGYSLLYMEGQEKAHNQDLG
LAGSCLPVFSTLPFAYCNIHQVCHYAQRNDRSYWLSSAAPLPMMPLTEEEIRPYVSRCAV
CEAPGQAVAVHSQDQSIPPCPQTWRSLWIGYSFLMHTGAGDQGGGQALMSPGSCLEDFRA
APFLECQGRQGTCHFFANEYSFWLTTVNSDLQFASGPSPDTLKDIQAQLRKISRCQVCMK
QG
NT seq 5049 nt   +upstreamnt  +downstreamnt
atgaggtgctttttcagatggatcgaggccttcgtcacagccccctggtcattaatattt
atcctctttaccatacaatatgaatatgggagtggcaagaaatacggcagcccctgcgga
ggaaggaactgctctgtctgccagtgttttcctgagaagggatctcggggtcacccagga
ccactgggaccacagggaccaataggacccttgggacccccaggacccattgggattcca
ggagaaaaaggacaaagaggtgacggtggcctgcctggactaccaggagagaaaggagac
aagggtccaaccggtgtccctggatttccaggcgtggatggcgtacctggtcacccaggg
cctcctggacccagaggcaaacctggtgtggacggctacaatggctcacgaggtgatccg
ggatatccaggagaaagaggagctcctggcccaggcggcccccctggtcagcctggggaa
aagggagaaaaaggaagatcggtgttcatctcaggtggctttaaaggtattcagggagac
cgtggggacccaggaccacccggcctacctggatctaggggtgaacaaggatcaataggg
cccatggggcatgcgggtgctccagggcttgcaggacctataggtcatcctgggagccct
gggttgaagggaaatcctgccacgggactgaaagggcaaaggggagagccgggtgaagtt
ggccagcatggtcctcctgggcccaccctgttggtacagccacctgacttgagtatctat
aaaggagagaagggtgtaaaaggaattcctggagcaattggccttccaggacctccagga
cacaagggagagcctggtattgggatcaaaggagagaaaggtatccctggcttcccagga
ccccggggtgagcctggttcccatggatctccaggttttccaggattcaaggggatacaa
ggagcagctggagatcctgggatgttcggatttcttggtccaaagggggatcctggagat
cgcgggtacccgggaccaccaggcatttcggtaactccagctccaccactcaaaggtgct
ccaggggacccagggccccctggccgctatggagagattggagatgttggattaccaggg
cctccagggcctccaggaaaaccaggggaaacttgtccaggcatgatgggacctcctggg
ccaccaggggttcctggtcctccaggatttccaggggaagctggtgttcctggaagactt
gactgtgccccaggaaaacctgggaatccagggctaccaggcctgcctggagcaccagga
ccagagggctcccctggatcagatgtgatatattgccgccctgggtaccctggaccaatg
ggagaaaagggaaaaatgggtcccccaggaagaagaggagccaaaggagcaaaaggaaat
gagggactctgtacctgtccaccaggtcccgaaggacctcctggtcctccaggacctcct
ggaagacaaggaagtaaaggagacttaggactccctggttggcatggagaaaagggtgat
ccaggccagcctggagctgaaggacctccagggccaccaggaagacctggtgccatgggg
ccccctggtaacaaaggggcaaagggtgacatggttgtatcaagagagaaagggcaaaaa
ggagaaagaggactggacgggccaccaggatttccagggccacatggacaagatggtcgg
gatggacgtgctggagaaagaggggatcctgggccgagaggggaccataaggatgcagcc
cccggcgagagagggcttccaggactaccaggccctccagggaaaacaggacctgcgggg
cctccaggcctgggatttccaggcccaccaggacagagaggtctaccaggagagcctggg
cgcccaggcatgagaggctttgatggcatgaaggggcaaaaaggtgactccatcctgtgt
aatgtaacctacccgggaaaaccaggtccgccaggttttgatggacctccaggtctgaag
gggtttccaggacccccgggggctcctggtatgagatgtccagatgggcagaagggccag
cggggcaaaccgggaatgtctggaattccaggtccccctggttttcgtggtgacatggga
gatccaggcatcaaaggagaagaggggacctcccctattggacccccaggcccacctgga
tctcctggaatggacggccagaggggaatcccaggagaccctgcatttggtgacccagga
ccccctggagagaggggtcttccaggagcaccaggcatgaaaggacagaaaggttaccca
ggatgcccaggggctggagggccgcctggcacccctggatctccaggtctcaaaggtccc
aaaggcagagaggggagtcctgggcttccagggatcccaggatcccctggccattcctgt
gaaagaggtgttccagggatcccagggcaacaaggacttcctggaatgccaggtgatcca
ggggccccaggttggaaaggacaaccaggagacatggggccgtctggaccagttgggatg
aagggcctccctggcctcccaggcctaccaggagccgatggtttcagagggcctcctggg
attccaggccccactggggaagatggcctccctggtcttccaggcccaaagggactccca
gggctgcttggcttccctggttttccaggagagagaggaaagtcaggcccagatggagaa
catggaagaaagggagaggttggagaaaaaggctggcctggcctgcggggagacccagga
gagcgaggcaccaaaggggacagaggacctcctggtgatgcaggaaaagcagtcatttca
aaaaagggggaacctggggatcctgggcctccaggagatggtggattctccggagaaaga
ggtgataaaggaagcccagggatgcgagggggaagaggcgatcctggaagagatggacca
cctggactccacaaagggcagcctgggttaaatggacctcctgggcctccgggtccccct
ggtcctccaggatcacctggactgagaggagtcattggctttcctggatttccaggtgac
cagggtgatccaggctctccaggaccccctggattctcaggagatgatggagcacgagga
cccaaaggaaaccaaggtgacccagccagtcagtgcggtctacccggtccaaagggtgag
ccaggtagccctggataccaaggacatacgggagcccctggagagaaaggcttccctgga
gatgacggagcccgaggaccaccaggcagaccaggccagcccggctcttttggaccacca
gggtgtccaggcgaccctgggatgcctggactcaagggccctccaggagaagtgggagac
cctgggccaagaggatatgcgggagatgtagggaggccaggtcctgccggagtgaaaggg
cctcctgggtctcctggtctgaatggcttgcacggtctgaagggtgagaaaggagcacga
ggcacctcaggtttgctcgaaatgggtccacctgggccaatgggaatgcctggacaaaaa
ggagagaaaggtgaccctgggagcccagggatttctcccccgggacttcctggagaaaag
ggcctcccaggacccccagggagaccaggaccacctggtcccgcaggtgccccaggaaga
gctgcgaaaggtgacattcctgatccaggtccacctggagactggggacctcctggccct
gatggcccaagaggagtacctgggcctccaggtccccctgggaatgtcgaccttctgaag
ggggatccaggtgactatggtttcccaggaccacctggctcccgaggtccaccaggccct
ccagggtgtcagggtcccccaggatgtgatggcaaagatggccagaaaggaccaatggga
cttccagggtttccagggccacctggtcttcctggggcgcctggagagaagggattactt
ggtcctccaggcagaaaagggccagtaggtcctccaggctgcagaggtgaacccgggcct
cctgcagatgtggattcctgtcctcgaatcccaggacttcctggagtgccaggcctcaga
ggatcagaaggacctatgggggaccctggacagagaggcctgcctggaccagggtgcaaa
ggagagcctggcctggatggcaggaggggccaggacggcatccctggatctccggggcct
ccaggacacaaaggtgacactggagaggcgggctgtcctggagcaccaggcccccctggt
ccaactggtgatcctggacccaaggggtttggccctggatacctcagtggcttcctcctg
gttctccacagtcagacagctcaagaaccagcctgccctgcgggcatgcctcggctctgg
acagggtacagcctgttatacatggaaggacaggagaaagcgcacaatcaagatcttggt
ttggcaggttcctgccttcctgtgtttagcacgctgccctttgcctactgcaatatccac
caagtgtgccactatgcccagagaaatgacaggtcctactggttgtccagtgcagctcct
cttcctatgatgccactcacagaggaagagatccgcccttacgtcagccgctgtgcagtg
tgtgaggccccaggtcaggccgtggctgtccacagtcaggaccaatccatcccaccgtgt
ccgcagacatggagaagcctctggattggatactcctttctgatgcacactggagctggg
gaccaaggaggagggcaggcgctgatgtcacctggcagctgcttagaggacttcagagct
gcaccattccttgaatgccagggccggcagggaacctgtcacttttttgcaaacgagtac
agcttctggctgaccactgtgaactcagacctgcagtttgcctctggcccgtcaccagac
accttgaaagacattcaggcccagctgaggaaaatcagcaggtgccaggtgtgcatgaag
cagggctaa

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