Apodemus sylvaticus (European woodmouse): 127692374
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Entry
127692374 CDS
T10613
Symbol
Xrcc5
Name
(RefSeq) X-ray repair cross-complementing protein 5
KO
K10885
ATP-dependent DNA helicase 2 subunit 2
Organism
asyl Apodemus sylvaticus (European woodmouse)
Pathway
asyl03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
asyl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
127692374 (Xrcc5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
asyl03400
]
127692374 (Xrcc5)
DNA repair and recombination proteins [BR:
asyl03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA-PK complex
127692374 (Xrcc5)
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Gene cluster
GFIT
Motif
Pfam:
Ku_N
Ku
Ku_C
DUF6005
TraI_2
Motif
Other DBs
NCBI-GeneID:
127692374
NCBI-ProteinID:
XP_052048607
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Position
9:complement(40673246..40724034)
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AA seq
610 aa
AA seq
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MAWSGNKAAVVLCVDVGVAMGNSFPGEESPIEQAKKVMTMFVQRQVFSESKDEIALVLYG
TDGTDNALAGQDQYQNITVHRHLMLPDFDLLEDIGNKIQPSSQQADFLDALIVCMDLIQR
ETIGKKFGKKHIEVFTDLSSPFSQDQLDIIICNLKKSGISLQFFLPFPIDKNGEPGERGD
CDSGLDHRTPSFPQKGLTEQQKEGLRMVRRVMLSLEGEDGLDEIYSFSESLRQLCVFKKI
ERRSMPWPCQLTIGPNLSIKIVAYKSIVQEKFKKSWIVVDARTLKKEDIQKETVYCLNDD
DETEVSKEDTIQGFRYGSDIIPFSKVDEEQMKYKSEGKCFSVLGFCKSSQVHRRFFMGYQ
VLKVFAAKDDEAAAVALSSLIHALDELNMVAIVRYAYDKRANPQVGVAFPYIKDAYECLV
YVQLPFMEDLRQYMFSSLKNNKKCTPTEAQLSAIDDLIDSMSLVKKNEEEDIIEDLFPTS
KIPNPEFQRLYQCLLHRALHLQERLPPIQQHIWNMLDPPTEMKAKCETPLSKVKTLFPLT
EVIKKKNQVTAQDVFQDNHEEGPAAKKYKTEKEEGFISISSLAEGNVTKVGSVNPVENFR
VLVRQKIASF
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
atggcgtggtccggtaataaggcagctgttgtgctgtgtgtggatgtcggcgttgccatg
ggtaactcctttcctggtgaagaatccccaattgaacaagcaaagaaagtgatgactatg
tttgtccagcgacaggtgttttcagagagcaaggatgagatcgctttagtcctctatggc
acagacggcacggataatgcccttgctggccaggaccagtatcagaacatcacagtgcac
agacacctgatgctaccagattttgatttgctggaagacatcggaaacaaaatccaacca
agttctcaacaagctgacttcctggacgccctgattgtgtgcatggatttgattcagcgc
gaaaccataggaaagaagtttgggaagaagcatattgaagtattcactgacctcagcagc
ccattcagccaagaccaactggacattataatttgtaacttgaagaagtctggcatctcc
ctgcagttctttctgccttttccaatcgacaagaatggcgagcctggcgagagaggagac
tgcgattccggcttggaccaccgtacaccctccttccctcaaaaaggacttactgagcag
caaaaggaaggcctccgcatggtgagaagggtgatgctgtctttagaaggcgaagacggg
ctggatgaaatttattccttcagcgagagtctgcggcaactgtgtgtcttcaagaagatt
gagaggcgttccatgccctggccctgccaactgaccattggccccaacttgtctataaag
attgtagcctataaatcgattgtacaggagaaatttaaaaagagttggatagttgtggac
gcaagaactctaaagaaggaagatatacaaaaggagactgtttattgcctaaatgacgat
gatgaaactgaagtttccaaagaggacactattcaagggttccgctacggaagcgacatc
attcctttttctaaagtggatgaggaacaaatgaaatataaatccgaggggaagtgcttc
tctgttttgggattttgtaaatcttctcaggttcatagaagattcttcatgggatatcaa
gttttaaaggtctttgcagcaaaggatgatgaggcggccgctgttgcactttcctccctc
attcatgctttggatgaattaaacatggtcgccatcgtccgatacgcttacgacaaaaga
gctaatcctcaagttggtgtagccttcccttacattaaggatgcctatgagtgtttagtt
tatgtgcagctgcctttcatggaagacttgcggcaatacatgttttcctcgctgaaaaac
aataagaaatgcactcccacagaggcacagttgagcgctattgatgatctgattgattcc
atgagcttggtaaagaaaaatgaggaagaagacatcattgaagacttgtttccaacttcc
aaaattccaaatcctgaatttcagcgattgtaccagtgtctgctgcatagagccttacat
ctccaggagcggctgcccccgattcagcagcacatttggaatatgctggatccccccact
gagatgaaagcgaaatgtgagactccactctctaaagtaaagacccttttccctctgaca
gaagtcatcaagaaaaagaaccaagtgaccgcgcaggacgttttccaagacaatcatgaa
gaggggcctgctgctaaaaaatacaagactgagaaagaagaaggtttcatcagcatctcc
agcctggcagaagggaatgtcaccaaggttggaagtgtgaatcctgttgagaacttccgt
gtcctagtgagacagaagattgccagcttttga
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