Apodemus sylvaticus (European woodmouse): 127692865
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Entry
127692865 CDS
T10613
Symbol
Trip12
Name
(RefSeq) E3 ubiquitin-protein ligase TRIP12 isoform X1
KO
K10590
E3 ubiquitin-protein ligase TRIP12 [EC:
2.3.2.26
]
Organism
asyl Apodemus sylvaticus (European woodmouse)
Pathway
asyl04120
Ubiquitin mediated proteolysis
Brite
Enzymes [BR:
asyl01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
127692865 (Trip12)
Ubiquitin system [BR:
asyl04121
]
Ubiquitin ligases (E3)
HECT type E3
127692865 (Trip12)
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
127692865
NCBI-ProteinID:
XP_052049422
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Position
9:28519242..28638348
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AA seq
2071 aa
AA seq
DB search
MSNRPNNNPGGSLRRSQRNTAGAQPQDDSIGGRSHLGQAKRKGYIPPESRKSNFKAPKVQ
SNTTSELSRGHLSKRSCSSSSAVIVPQPEDPDRANTSERQKTGQVPKKDNSRGVKRSASP
DYNRTNSPSSAKKPRAFQHIESLSETNKPHSKSKKRHLDQEQQLKSAQLPSTSKAHTRKS
VAAGTSRSQKRKRTESSCVKSGSGSESTGAEERSAKPTKLASKSATSAKAGCSTITDSSS
AASTSSSSSAVASASSTVPAGARVKQGKDQNKARRSRSASSPSPRRSSREKEQSKTGGSS
KFDWAARFSPKVSLPKTKLSLPGSSKSETSKPGPSGLQAKLASLRKSTKKRSESPPAELP
SLRRSTRQKTTGSCASTSRRGSGLGKRGAAEARRQEKMADPESNQETVNSSAARTDEAPQ
GAAASSSVAGAVGMTTSGESESDDSEMGRLQALLEARGLPPHLFGPLGPRMSQLFHRTIG
SGASSKAQQLLQGLQASDESQQLQAVIEMCQLLVMGNEETLGGFPVKSVVPALITLLQME
HNFDIMNHACRALTYMMEALPRSSAVVVDAIPVFLEKLQVIQCIDVAEQALTALEMLSRR
HSKAILQAGGLADCLLYLEFFSINAQRNALAIAANCCQSITPDEFHFVADSLPLLTQRLT
HQDKKSVESTCLCFARLVDNFQHEENLLQQVASKDLLTNVQQLLVVTPPILSSGMFIMVV
RMFSLMCSNCPTLAVQLMKQNIAETLHFLLCGASNGSCQEQIDLVPRSPQELYELTSLIC
ELMPCLPKEGIFAVDTMLKKGNAQNTDGAIWQWRDDRGLWHPYNRIDSRIIEVAAHQVGE
DEISLSTLGRVYTIDFNSMQQINEDTGTARAIQRKPNPLANTNTSGYSELKKDDARAQLM
KEDPELAKSFIKTLFGVLYEVYSSSAGPAVRHKCLRAILRIIYFADAELLKDVLKNHAVS
SHIASMLSSQDLKIVVGALQMAEILMQKLPDIFSVYFRREGVMHQVKHLAESESLLTSPP
KACTNGSGSLGSTTPASSGTATAATNASADLGSPSLQHSRDDSLDLSPQGRLSDVLKRKR
LPKRGPRRPKYSPPRDDDKVDNQAKSPTTTQSPKSSFLASLNPKTWGRLSAQSNSNNIEP
ARTAGVSGLARAASKDTISNNREKIKGWIKDQAHKFVEHYFSSENMDGSNPALNVLQRLC
AATEQLNLQVDGGAECLVEIRSIVSESDVSSFEIQHSGFVKQLLLYLTSKSEKDAVSREI
RLKRFLHVFFSSPLPGEEPVGRVEPVGHAPLLALVHKMNNCLSQMEQFPVKVHDFPSGNG
AGGSFSLNRGSQALKFFNTHQLKCQLQRHPDCANVKQWKGGPVKIDPLALVQAIERYLVV
RGIFRYGRVREDDEDSDDDGSDEEIDESLAAQFLNSGNVRHRLQFYIGEHLLPYNMTVYQ
AVRQFSVQAEDERESTDDESNPLGRAGIWTKTHTIWYKPVREDEESSKDCVGGKRGRAQT
APTKTSPRNAKKHDELWHDGVCPSVANPLEVYLIPTPPENITFEDPSLDVILLLRVLHAI
SRYWYYLYDNAMCKEIIPTSEFINSKLTAKANRQLQDPLVIMTGNIPTWLTELGKTCPFF
FPFDTRQMLFYVTAFDRDRAMQRLLDTNPEINQSDSQDSRVAPRLDRKKRTVNREELLKQ
AESVMQDLGSSRAMLEIQYENEVGTGLGPTLEFYALVSQELQRADLGLWRGEEVTLSNPK
GSQEGTKYIQNLQGLFALPFGRTAKPAHIAKVKMKFRFLGKLMAKAIMDFRLVDLPLGLP
FYKWMLRQETSLTSHDLFDIDPVVARSVYHLEDIVRQKKRLEQDKSQTKESLQYALETLT
MNGCSVEDLGLDFTLPGFPNIELKKGGKDIPVTIHNLEEYLRLVIFWALNEGVCRQFDSF
RDGFESVFPLSHLQYFYPEELDQLLCGSKADTWDAKTLMECCRPDHGYTHDSRAVKFLFE
ILSSFDNEQQRLFLQFVTGSPRLPVGGFRSLNPPLTIVRKTFESTENPDDFLPSVMTCVN
YLKLPDYSSIEIMRDKLLIAAREGQQSFHLS
NT seq
6216 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaccggcctaataacaatccaggggggtcactgcgacgttcacagaggaacact
gccggggcccaaccacaagacgactcaataggaggaaggtcacatttagggcaggcaaaa
cgtaagggatatatccctcctgagagtagaaaatctaattttaaggcacccaaagtgcaa
tctaatactacttctgaactgtcaaggggacacctttctaaaagaagctgcagttcatca
tctgctgtcatagttccacaaccagaggatccagacagagccaatacttcagaaaggcag
aaaacggggcaggtgcctaaaaaagacaattctcgaggagtgaaacgcagtgctagtcca
gactacaacaggaccaattctcctagctctgcgaaaaagcccagagcatttcagcatatt
gagtctctctcagaaaccaataagccacatagtaagtcaaagaagagacatttagaccag
gagcaacaactgaaatctgcacaattgccatcaacaagcaaggctcacaccagaaagagt
gtggctgctggtacttcacggagtcagaaaagaaagaggacagagagttcttgtgttaag
agtggttctgggtccgaatcaactggtgccgaagagagatctgcaaaacccaccaagctg
gcttcaaaatcggccacctcagccaaagctgggtgtagcaccatcactgattcttcctct
gctgcctctacttcctcctcatcttcagctgtagcctcggcctcttctactgtaccagca
ggtgccagggtgaaacaaggaaaagaccagaacaaggcccggcgttcccgttcagcatcc
agccctagtcccagaagaagtagcagggaaaaggaacagagtaaaactggtggctcttca
aaatttgattgggctgctcgcttcagccccaaagttagcctacctaaaacaaaactgtct
cttccagggtcttctaagtcagagacatcaaaacctggaccttctggattacaggccaaa
ttagcaagtttaagaaagtctaccaagaagcgcagtgagtccccacctgctgagctcccc
agtttgaggaggagcacacgccaaaagaccacgggctcctgtgctagtaccagtcggcga
ggctctggcctgggcaagagaggagcagctgaggcccggcggcaagagaaaatggcagac
cctgaaagcaaccaggagacagtaaattcctcagctgcccgaacagatgaagctccccaa
ggagctgcagcctctagttctgttgcaggggctgttggcatgaccacctctggggagagt
gaatcggatgattctgagatgggacgattacaagctctgttagaggccaggggtcttcct
cctcacctgtttggtcctcttggtcctcggatgtcacaacttttccatagaacaattgga
agcggagctagttctaaggcccagcagcttcttcaaggactacaagccagtgatgaaagt
caacagcttcaggcagtcattgaaatgtgtcagctattggtcatggggaatgaggagaca
ctaggagggtttcctgtgaagagtgttgttccagctttgataacattactgcagatggaa
cataattttgacattatgaatcatgcttgccgagccttaacatatatgatggaagcactc
cctcggtcatctgctgttgtagtcgatgctattcctgttttcttagaaaagctgcaagtt
attcaatgtattgatgtggcagagcaggccttgactgccttggagatgttgtcacgacga
cacagtaaggccatcttacaggcgggtggtttggcagactgcttgttgtatttagaattc
ttcagcatcaatgcccaaagaaatgcactagcaattgcagccaattgctgccagagtatc
actccagatgagtttcattttgtggcagattccttaccattgcttacccaaaggctaact
catcaggacaaaaagtcagtagaaagcacttgcctttgttttgcacgtttagtggacaac
tttcaacatgaggagaacttactgcaacaggttgcttccaaagatctacttacaaatgtt
caacaactgttggtagtgactccaccgattctaagttctgggatgtttattatggtggtt
cgcatgttttctctgatgtgttccaactgtccaacattagctgttcaacttatgaaacaa
aacattgcagaaacacttcacttcctcctatgtggtgcctccaatggaagttgtcaagag
cagattgatcttgttccacgaagtcctcaagaactgtatgaactgacatctttgatttgt
gaacttatgccatgtttaccaaaagaaggcatttttgcagttgataccatgttgaaaaag
ggaaatgcgcagaatacagatggtgcaatatggcagtggcgggatgaccgcggcctctgg
catccctataacaggattgacagccggatcattgaggtagcagcccatcaggtcggtgag
gatgagataagcttgtccactctgggacgagtttatactattgattttaattctatgcag
caaatcaatgaggacacgggaacagcacgtgccattcagagaaaacctaaccccttagcc
aatactaacactagtggatattcagaattaaagaaggatgatgcacgagcacagctaatg
aaagaagatccggaactggctaagtctttcattaagaccttatttggtgttctctacgaa
gtgtacagctcttcagcaggccctgcagtcagacacaagtgccttagagcaattcttagg
atcatttattttgctgatgctgaacttctgaaggatgttctgaaaaatcatgctgtttca
agtcacattgcttccatgctatcaagtcaagacctgaagatagtagttggagctcttcag
atggcagaaatcctaatgcaaaagttacctgatatttttagcgtttacttcaggagagaa
ggtgtgatgcatcaagtaaaacatttagcagaatcagagtctttgttgacaagtccccca
aaagcatgtacaaatgggtcaggatccttggggtctacaacaccagccagcagtgggact
gccacagcagcaaccaacgcctctgctgatctggggtcacctagcttgcagcatagcaga
gatgattctctggatctgagccctcaaggtcgattaagtgatgttctcaagagaaaacga
ctgccaaaacgagggccaagaaggccaaagtattcccctccaagagatgatgacaaagta
gacaatcaagctaaaagtcccaccactacacagtcacctaaatcttccttccttgcaagt
ttgaatccaaaaacatggggaaggttaagcgcacagtccaacagcaacaacattgaacca
gcacgaactgcaggagttagtggtcttgccagggcagcctcaaaagacaccatatccaat
aatagagaaaaaattaagggctggattaaggatcaggcacataaatttgttgagcattat
tttagttctgagaatatggatggaagcaaccctgccttgaatgtccttcagagactatgt
gctgcaactgaacaactcaacctccaggtggatggtggagctgagtgccttgtagaaatc
cgtagcatagtctcagagtcagatgtttcttcatttgaaatccaacatagtgggtttgta
aaacaactgttgctgtatttgacatctaagagtgaaaaggatgctgtcagcagagaaatc
cgattaaagcgtttccttcatgtatttttttcttctccacttcctggagaagagcctgtt
ggaagagtagaaccagtgggccatgcacctttgttggcattggttcacaagatgaacaac
tgtctcagccaaatggagcaatttccagtcaaagtgcatgatttccctagtggaaatgga
gctggaggcagcttttctctcaacagaggatcacaagctttaaaatttttcaacacacat
cagttaaaatgtcaattacaaagacacccagactgtgcgaatgtgaagcagtggaaagga
gggcctgtcaagattgatcccctggctctggtgcaagctattgagagataccttgtggtt
agaggtattttccgatatggaagagtaagagaagatgatgaagacagtgatgatgatggg
tctgatgaagaaatagatgagtctctggctgctcaattcttaaattcgggaaatgtaagg
cacaggctgcagttttatattggagaacatttactaccatataacatgaccgtgtatcag
gcagtgcggcagttcagcgttcaggctgaagatgaaagagaatctactgatgatgagagc
aaccctctgggaagagctggaatttggacgaagactcataccatatggtacaaacctgtg
agagaggatgaagaaagtagtaaagattgtgttggtggcaaaagggggagagcccaaaca
gctccaacaaaaacttcccccagaaatgcaaagaagcatgatgagttatggcatgatggt
gtgtgcccgtcagtagcaaatcctttagaagtttacctcattcccacaccacctgaaaat
atcacctttgaagacccatccttagatgtaatacttcttttaagagttttacatgccatc
agtcgatattggtattacttgtatgataatgcaatgtgcaaggagattattccaactagt
gaatttattaacagtaaattaacagcaaaagcgaataggcaacttcaagatcctttagta
atcatgacaggaaacatcccaacatggctcactgagctaggaaaaacctgcccatttttc
tttccttttgatacccgacaaatgcttttttatgtaactgcatttgatcgggaccgggca
atgcaaagattacttgataccaacccagaaatcaaccagtctgattcgcaagacagtaga
gttgcacctagattggatagaaaaaaacgtactgtgaacagagaggagcttctgaaacaa
gctgagtctgtgatgcaggaccttggtagctctcgagccatgttagaaatccagtatgaa
aatgaggttggtacaggtctggggccaacactggagttttatgcacttgtttctcaggaa
ctacagagagctgacttgggtctctggagaggtgaagaagtaactcttagcaatccaaaa
ggaagccaagaagggaccaagtatattcaaaacctccagggcctgtttgcacttcccttt
ggtaggacagctaagccagctcacatcgcaaaggttaagatgaagtttcgcttcttagga
aaattaatggctaaggctatcatggatttcagattggtggatcttccacttggcctgccc
ttttataagtggatgctgcggcaggaaacttcattgacatctcatgatttatttgacatt
gatcctgttgtagccagatcagtatatcacctagaagacattgtcagacagaagaaaaga
ctggagcaggataaatcccagaccaaagagagtctacaatatgcattggaaactcttaca
atgaatggctgctcagtggaagatctaggattggattttacgttgcctgggtttcccaac
attgaattgaagaaaggagggaaggatattccagttactatccacaatttggaagaatac
ctaagattggtgatattctgggcactaaatgaaggtgtttgtcggcagtttgactcattc
agagatgggtttgaatcggtcttcccgctcagccatcttcagtacttttacccagaagag
ctggaccagctcctgtgtggcagtaaagcagacacttgggatgcaaagacattgatggaa
tgctgcaggcctgatcatggctatactcatgacagtcgggctgtgaagttcttgtttgag
attctcagtagttttgacaatgagcagcagaggttgtttctccaatttgtgactggtagc
ccacgattgccagttggaggatttcgaagtttaaatccacctctgacgattgtgcgcaag
acatttgaatcaacagaaaacccagatgacttcttaccgtcagtaatgacttgtgtgaac
tatcttaagttgccggactactcgagcattgagataatgcgtgacaaactgttgatagca
gcaagagaaggccaacagtcgttccatctttcctga
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integrated database retrieval system
