Apodemus sylvaticus (European woodmouse): 127693305
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Entry
127693305 CDS
T10613
Symbol
Hdac5
Name
(RefSeq) histone deacetylase 5 isoform X1
KO
K11406
histone deacetylase 4/5 [EC:
3.5.1.98
]
Organism
asyl Apodemus sylvaticus (European woodmouse)
Pathway
asyl04371
Apelin signaling pathway
asyl04613
Neutrophil extracellular trap formation
asyl05034
Alcoholism
asyl05203
Viral carcinogenesis
asyl05206
MicroRNAs in cancer
Brite
KEGG Orthology (KO) [BR:
asyl00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
127693305 (Hdac5)
09150 Organismal Systems
09151 Immune system
04613 Neutrophil extracellular trap formation
127693305 (Hdac5)
09160 Human Diseases
09161 Cancer: overview
05206 MicroRNAs in cancer
127693305 (Hdac5)
05203 Viral carcinogenesis
127693305 (Hdac5)
09165 Substance dependence
05034 Alcoholism
127693305 (Hdac5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
asyl03036
]
127693305 (Hdac5)
Enzymes [BR:
asyl01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
127693305 (Hdac5)
Chromosome and associated proteins [BR:
asyl03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
127693305 (Hdac5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
HDAC4_Gln
TFIIA
Motif
Other DBs
NCBI-GeneID:
127693305
NCBI-ProteinID:
XP_052049991
LinkDB
All DBs
Position
10:20721741..20756863
Genome browser
AA seq
1132 aa
AA seq
DB search
MLLVPKAQGLVEMLQTIYETESCLSADGMSGREPSLEILPRTPLHSIPVAVEVKPVLPGA
MPSSMGGGGGGSPSPVELRGALAGPMDPVLREQQLQQELLVLKQQQQLQKQLLFAEFQKQ
HDHLTRQHEVQLQKHLKQQQEMLAAKRQQELEQQRQREQQRQEELEKQRLEQQLLVLRNK
EKSKESAIASTEVKLRLQEFLLSKSKEPTPGGLNHSLPQHPKCWGAHHASLDQSSPPQSG
PPGTPPSYKLPLLGPYDSRDDFPLRKTASEPNLKVRSRLKQKVAERRSSPLLRRKDGTVI
STFKKRAVEIAGTGPGVSSVCNSAPGSGPSSPNSSHSTIAENGFTGSVPNIPTEMLPQHR
ALPLDSSPNQFSLYTSPSLPNISLGLQATVTVTNSHLTASPKLSTQQEAERQALQSLRQG
GTLTGKFMSTSSIPGCLLGVALEGDTSPHGHASLLQHVLLLEQARQQSTLIAVPLHGQSP
LVTGERVATSMRTVSKLPRHRPLSRTQSSPLPQSPQALQQLVMQQQHQQFLEKQKQQQMQ
LGKILTKTGELSRQPTTHPEETEEELTEQQEALLGEGALTMPREGSTESESTQEDLEEEE
EEEEEEEDCIQVKDEDGKSGPDEGPDLEESSAGYKKLFADAQQLQPLQVYQAPLSLATVP
HQALGRTQSSPAAPGSMKSPTDQPTVVKHLFTTGVVYDTFMLKHQCMCGNTHVHPEHAGR
IQSIWSRLQETGLLSKCERIRGRKATLDEIQTVHSEYHTLLYGTSPLNRQKLDSKKLLGP
ISQKMYAVLPCGGIGVDSDTVWNEMHSSSAVRMAVGCLVELAFKVAAGELKNGFAIIRPP
GHHAEESTAMGFCFFNSVAITAKLLQQKLSVGKVLIVDWDIHHGNGTQQAFYNDPSVLYI
SLHRYDNGNFFPGSGAPEEVGGGPGVGYNVNVAWTGGVDPPIGDVEYLTAFRTVVMPIAQ
EFSPDIVLVSAGFDAVEGHLSPLGGYSVTARCFGHLTRQLMTLAGGRVVLALEGGHDLTA
ICDASEACVSALLSVELQPLDDAVLQQKPSVNAVATLEKVIEIQSKHWSCVQRFAAGLGC
SLREAQTGEKEEAETVSAMALLSVGAEQAQAAATQEHSPRPAEEPMEQEPAL
NT seq
3399 nt
NT seq
+upstream
nt +downstream
nt
atgctgctggtgcccaaggctcaggggcttgtggagatgctgcagaccatctatgagacc
gagtcctgtctctcagcagatggcatgtcaggccgggaaccatccctggaaatcctgcca
cggactcctctgcacagcatcccggtggcagtggaggtgaagccggtgttgccaggagcc
atgcccagctccatggggggtggaggtggaggtagccccagccctgtggagctgcggggg
gctctggcaggccccatggatcctgtactgcgggagcagcaactgcagcaggagctcctg
gtgctcaagcagcaacagcagcttcagaagcagctcctgtttgccgagtttcagaagcag
catgaccacctgacgcggcagcacgaagttcagctgcagaaacacctcaagcagcagcag
gagatgctggcggctaagaggcagcaggagctggagcagcagcggcagcgggagcagcag
cggcaggaggagctagagaaacagcggctggagcagcagctgctcgtcctgcgcaacaag
gagaagagcaaagagagtgccatcgccagcaccgaggtgaagctgaggctccaggaattc
ctgttgtccaagtcaaaggagcccacgccaggcggcctcaaccattccctcccacagcac
cccaaatgctggggagcccaccatgcttctttggaccagagttcccctccccagagcggc
cctcctgggacgcctccctcctacaaattgcctttgcttgggccctatgacagtcgtgat
gactttcctctccgtaaaacggcctcggaacccaacttaaaagtacgttcgaggctaaaa
cagaaggtggcggagaggagaagcagtccgctcctgcgtcgaaaggatggcaccgttatt
agtacttttaagaagagagcggttgagatcgcaggcacggggcctggggtgtcgtccgtg
tgtaacagtgcgcccggctctggccccagctctcccaacagttcccacagcaccatcgct
gagaacggctttactggctcggttcccaacatccccaccgagatgctcccccagcaccgg
gccctccctctggacagttccccaaaccagttcagcctctacacgtctccttctctgcct
aacatctccctagggctgcaggccactgtcactgttaccaactcacacctcaccgcctcc
ccgaagctgtcgacacagcaggaggctgagaggcaggcccttcagtccctgcggcagggc
ggcacactgaccggcaagttcatgagcacatcatctatccccggctgcctgctgggagtg
gcactggagggcgacacgagcccccacgggcacgcatcccttttgcagcacgtcttgttg
ctggagcaggcccggcaacagagcacgctcatagcggtgccgctccacgggcagtcccca
ctggtgacgggtgaacgtgtggccaccagcatgaggacagtgagcaagctcccgaggcac
cgacctctgagccgcacgcagtcctccccgctgccgcagagcccccaagccctgcagcag
ctggtcatgcagcagcagcaccagcagttcctggaaaagcagaaacagcagcagatgcag
ctgggcaagatccttaccaaaactggggagctgtcaaggcagcccaccacccaccctgag
gaaacagaggaggagctgacggaacagcaggaggccttgctgggagagggggccctgacc
atgccccgggagggctctacagagagtgagagcacccaggaagacctagaagaggaggag
gaggaggaagaagaagaggaggactgcattcaggtcaaggatgaggatggcaagagtggt
cctgatgagggccctgacttagaggagtccagtgccggttacaaaaagttgttcgcagat
gcccagcagttacagcccctccaggtgtaccaggcacccctcagcctggccactgtgcct
catcaggccctgggccgcacccagtcctcacctgctgctcctgggagcatgaagagcccc
acagaccaacccactgtggtgaagcacctcttcaccacaggtgtggtctatgacacgttc
atgctgaaacatcagtgtatgtgcggaaacacacacgtgcacccagagcacgccggccga
atccagagcatctggtcccggctgcaggaaactggcctgctcagcaagtgtgagcggatt
cggggtcgtaaagccacactggatgaaatccagaccgtgcattctgagtaccacaccctg
ctctacgggaccagcccccttaaccgacagaagctggacagcaagaagctgcttggcccc
atcagccagaagatgtacgccgtgctgccttgtgggggcatcggggtggacagtgacacc
gtgtggaatgagatgcactcctctagtgccgtgcggatggcagtgggctgcctggtggag
ctggccttcaaggtggctgcaggagagctcaagaatggctttgccatcatccggccccca
ggacatcacgccgaggagtccacagccatgggattctgcttcttcaactccgtagccatc
acagctaagctcctgcagcagaagctgagcgtgggcaaggtcctcatcgtggactgggac
attcaccatggcaacggcacccagcaagcgttttacaatgacccctctgtgctctacatc
tccctgcatcgctacgataatgggaacttcttcccgggctctggggctcctgaagaggtt
ggtggagggccaggtgtggggtacaacgtaaatgtggcgtggacaggaggtgtggatccc
cccattggagatgtggagtacctgacagccttcaggacagtggtgatgcccattgcccag
gaattctcacctgacatcgtcctcgtgtccgctgggtttgatgctgttgaaggacatctg
tctccactgggtggctattctgtcaccgccagatgttttggccacttgaccaggcagctc
atgacgctggcagggggccgggtggtgctggccctggagggaggccacgacttgaccgcc
atctgtgacgcctctgaggcctgtgtctcggctctgcttagcgtggagctgcagcccttg
gatgatgcagtcttgcagcagaagcccagtgtcaatgcagtggccacactggagaaagtc
atcgagatccagagcaagcactggagctgtgtacagaggtttgccgctggtctgggctgc
tcgctgcgggaggctcagacgggtgagaaagaggaggccgagactgtgagcgccatggcc
ctactttccgtgggggctgagcaggcccaggctgctgccactcaagagcacagccccagg
ccagcagaggaacccatggagcaggagcctgccctgtga
DBGET
integrated database retrieval system
