Apodemus sylvaticus (European woodmouse): 127693502
Help
Entry
127693502 CDS
T10613
Symbol
Rai1
Name
(RefSeq) retinoic acid-induced protein 1
KO
K19749
retinoic acid-induced protein 1
Organism
asyl Apodemus sylvaticus (European woodmouse)
Brite
Transcription factors [BR:
asyl03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
127693502 (Rai1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
127693502
NCBI-ProteinID:
XP_052050372
LinkDB
All DBs
Position
10:complement(64141537..64237940)
Genome browser
AA seq
1890 aa
AA seq
DB search
MQSFRERCGFHGKQQNYPQSSQETSRLENYRQPGQAGLSCDRQRLLAKDYYSPQPYTGYE
GGTGTPSGTVATAAADKYHRGSKSLQGRPAFPSYVQDSSPYPGRYSGEEGLQTWGGPQPP
PPQPQPLPGAVSKYEENLMKKTVVPPNRQYPEQSPQLPFRTHSLHAPPPQPQQPLAYPKL
QRQKPQNDLASPLPFPQGSHFPQHSQSFPPSSTYAPTVQGGGQGAHSYKSCTAPSAQPHD
RPMSASASLAPGQRVQNLHAYQPGRLGYEQQQQQALQSRHHTQETLHYQNLAKYQHYGQQ
GQGYCPPDTAVRTPEQYYQTFSPSSSHSPARSVGRSPSYSSTPSPLMPNLENFPYSQQPL
STGAFPTGITDHSHFMPLLNPSPTDAASSVDPQVSNCKPLQKEKLPDSLLSDLSLQSLSA
LTSQVENISNTVQQLLLSKATMPQKKGVKSLVSRTPEQHKSQHCSPEGSGYSAEPAGTPL
SEPPSSTPQSTHAEPQDTDYLSGSEDPLERSFLYCSQARGSPARVNSNSKAKPESVSTCS
VTSPDDMSTKSDDSFQSLHSTLPLDSFSKFVAGERDCPRLLLSALAQEDLASEILGLQEA
IVEKADKAWAEASSLPKDNGKPPFSLENHGTCLDTVAKTSWSQPGEPETLPEPLQLDKGG
STKDFSPGLFEDPSVAFATTDPKKTTSPLSFGTKPLLGTATPDPTTAAFDCFPDTPTASS
VDGANPFAWPEENLGDACPRWGLHPGELTKGLEQGAKASDGVGKADAHETAARMGFQEEH
AIAKPVAALSGDFKQQEADGVKEEVGGLLQCPEVGKADQWLEESRHCCSSTDFGDLPLLP
PPGRKEDLEAEEEYSSLCELLGSPEQRPSLQDPLSPKAPLICTKEEAEEVLDTKAGWVSP
CHLSGEPAVLLGPSVGAESKVQSWFESSLSHMKPGEEGPEMERAPGSSGTSQGSVAPKPN
KPAVPEGPSAKKEPVPRGKSLRSRRVHRGLPEAEDSPCRVPALPKDLLLPESCTGPAQGQ
AEGAGAPGRGLSEGLPRMCTRSLTALSEPQTPGPPGLTTTPTPPDKLGGKQRAAFKSGKR
VGKPSPKAASSPSNPAALPVASDSSPMGSKTKEPDSPSMPGKDQRSMVLRSRTKPQQVFH
AKRRRPSESRIPDCRAKKLPANNHLPTAFKVSSGPQKEGRMSQRVRVPKPGTGSKLSERP
LHTLKRKSAFMAPVPTKKRSLILRSNNGSGGDGREERAESSPGLLRRMASPQRARPRGSG
EPPPPPPLEPPAACMGLAAQASLPSAVRTKVLPPRKGRGLKLEAIVQKITSPGLKKLACR
VSGAPPGTLRSPALPEKRSAGSPAGAEEGLGGMGAGQMLPAASGADPLCRNPASRSLKGK
LLNSKKLSSAADCPKGEAFVSPETLPSLGTARAPKKRSRKGRTGAVGPSKGPLEKRACPG
QALLLTPHDRASGTQGGGEDNSSGGGKKPKTEELGPASQPPEGRPCQPQTRAQKQPGQAS
YSSYSKRKRLSRGRGKTTHASPCKGRATRRRQQQVLPLDPAEPEIRLKYISSCKRLRADS
RTPAFSPFVRVEKRDAYTTICTVVNSPGDEPKPHWKPSSSVASSSTSSSSLEPAGASLTP
FPGGSVLQPRASLPLSSTMHLGPVVSKALSTSCLVCCLCQNPANFKDLGDLCGPYYPEHC
LPKKKPKLKEKVRLEGTLEEAPLPLERTIPGLECAASTTAATPTTTTVTATTTLGRLSRP
EGPADPAKQGSLRTSARGLSRRLQSCYCCDGQGDGGEEVAPADKSRKHECSKEAPTEPGG
DTQEHWVHEACAVWTSGVYLVAGKLFGLQEAMKVAVDMPCTSCHEAGATISCSYKGCIHT
YHYPCANDTGCTFTEENFTLKCPKHKRLPL
NT seq
5673 nt
NT seq
+upstream
nt +downstream
nt
atgcagtcttttcgagaaaggtgtggtttccatggcaaacagcaaaactacccacaaagc
tcacaggagacatcgcgcctggagaactacaggcagccgggtcaggctgggctgagctgt
gatcggcagcggctgctggccaaggactattacagccctcagccctatacaggctatgag
ggtggcactggtacaccttccggcacagtggccacggcagctgcagacaagtaccaccga
ggcagcaaatccctgcaggggagaccagctttccctagctatgttcaagacagcagcccc
tacccagggcgctactctggcgaggagggtcttcagacttggggggggccacagccacca
cctcctcagccacagcctctgccaggggcagtgagcaagtatgaggagaacttgatgaag
aagacagtggtgcctccaaacaggcagtaccctgagcagagccctcagcttcccttccgg
actcacagcctgcatgccccaccaccacagcctcagcagcccctggcttaccccaaactc
caaaggcagaaaccacagaatgaccttgcctcccccctgcccttcccccagggcagccac
ttcccccagcattcccagtccttccctccctcctccacttatgccccaacagtgcagggt
ggtgggcagggggcccactcatacaagagctgcacggcgccatctgcccagcctcacgac
aggccgatgagtgccagtgcgagcctggctccagggcaacgggtccagaatcttcacgct
taccagccgggccgccttggctacgagcagcagcagcagcaagcccttcaaagccggcac
cacacccaggaaacactccactaccagaacctcgccaagtaccaacactatggccagcaa
ggtcagggctactgtccaccggacacagctgtcaggactccagagcagtattaccagacc
ttcagcccgagctccagccactctcctgcacggtctgtgggtcgctccccttcctatagc
tccaccccgtccccactgatgcccaatctggagaacttcccctatagtcagcagccgctt
agtactggggccttccccacaggcatcacagaccacagccactttatgcccctgctcaac
ccatccccaacagacgctgccagttctgtggacccccaggtcagcaactgcaagcccctg
caaaaggagaagctccctgacagcttgctgtcggaccttagcctgcagagcctttcagcg
ctcacctcccaggtggagaacatctccaacactgtgcagcaactcctgctgtccaaagcc
accatgccgcagaagaaaggggtcaagagccttgtgtctaggactccagagcagcacaaa
agccagcactgtagccctgagggcagtggctactctgctgagccagcaggcacaccactg
tctgagccgccaagcagcacaccacagtccactcatgctgagccacaagacactgactac
ctgagtggctctgaggacccgctagagcgcagcttcctctactgcagccaggcccggggc
agtcctgccagggtcaacagcaactccaaggctaagcctgagtctgtgtccacctgttcc
gtgacctcacccgatgacatgtccaccaagtctgacgactccttccagagcctgcacagt
actctgccactggacagcttctccaaattcgtggcaggcgagcgggactgcccacggctg
ttgctcagtgccctggcacaggaagatctggcctctgagatcctgggactgcaggaagcc
attgttgagaaggctgacaaggcctgggctgaggcttccagcctgcccaaggacaatggc
aagccgcccttctcactggagaaccacggcacctgcctggacactgtggccaagacttca
tggtcacagccaggggagccagagactctacctgagcccttgcagctggacaagggtggc
agcaccaaggacttcagccccgggctgtttgaagacccttctgtggcctttgccaccact
gatccgaagaaaacaaccagccccctgtccttcggcaccaagcctttgcttgggactgcc
actcctgaccccaccacagcagcatttgactgctttccagatacacccactgccagctca
gtggatggtgccaacccctttgcctggccagaggagaacctgggtgatgcttgtcctcgt
tggggcctccaccctggtgaacttaccaagggcttggaacagggtgccaaggcctcagac
ggtgtgggcaaggcagacgcacatgagacggctgctcgcatgggcttccaggaagagcat
gccattgcgaagccagtggctgcactgtctggggacttcaaacagcaggaggcagatggg
gtaaaagaggaagtgggtgggttgctgcagtgccctgaggtgggcaaggctgaccagtgg
ctggaggagagccggcattgctgctcctccactgacttcggggacctgcccctgttgccg
ccccctggcaggaaggaggacctggaagcggaagaggagtactcttctctgtgtgaactg
ctgggaagccctgaacagaggcccagcctgcaggacccattgtctcccaaggccccgctg
atctgcaccaaggaggaggcagaggaggtgctggataccaaggctggctgggtctctcca
tgtcacctctctggggagcctgctgtcctactgggcccctctgtgggtgccgaatcaaag
gtccagagctggtttgaatcttctctgtcacatatgaagccgggagaagaagggccagaa
atggagagagctccaggtagttccggcacttcacaaggctccgtggccccaaagcctaac
aagcctgccgttcctgaggggcccagtgctaagaaagagcctgtgccacggggtaaaagt
ctgcggagccggcgagtacaccgggggctgcctgaggctgaagactctccgtgcagggtg
ccagcacttcccaaagacctcttgctcccagagtcctgcacagggcccgcacagggacag
gcagagggggctggagccccaggccgggggctatcagaagggctccccagaatgtgtacc
cgttctcttacagctctgagtgagccccaaactcctggacctccaggcctgactaccact
cccacacctcctgacaaactgggagggaaacagagagctgccttcaagtctggcaagcgg
gtgggaaaaccatcccccaaggctgcgtctagccccagcaaccctgccgccctgcctgtc
gcctcagatagcagccccatgggctccaaaaccaaggagccagactctcccagcatgcct
ggcaaggaccagcgttccatggtcctccggtctcgcaccaaaccccagcaggtcttccat
gccaaacggcggcggccctcagagagccggatcccagactgtcgtgccaagaagctccct
gctaacaaccatttgcccactgcattcaaggtttccagtgggccccagaaggaaggccgg
atgagccagcgggtcagagtgcccaagcctgggacaggaagcaagctttcagagaggccg
ctccacaccctcaaaaggaagtccgctttcatggcacctgtccccaccaaaaagcggagc
ctcatcctgcgaagcaacaatggaagtgggggagatgggagggaggagagggctgagagc
tcccctggcctcctcaggaggatggcctcaccccagagggccagacccaggggcagtggg
gagccacccccacccccacccttggagccgcctgccgcatgcatggggttggctgcacaa
gcctcgctgcccagtgctgtgaggaccaaggtgctgccaccacggaagggccgcggcctc
aagctggaggccatagtgcagaagatcacctcacctggtctcaagaagcttgcgtgcagg
gtgtcaggggcccctcctgggactctccgaagcccagccctacctgagaaacgttcagcg
ggcagcccagctggggcagaagagggcttaggaggaatgggtgcagggcaaatgctacca
gcagcttcaggagccgacccattgtgcagaaacccagccagcaggtccctaaaagggaaa
ctcttgaatagtaagaagctgtcctctgctgctgactgccccaaaggtgaggccttcgtg
tccccagagaccctgccatccctagggactgctcgggcaccgaagaaaaggagccggaaa
ggcaggactggggccgtgggaccctccaaaggcccattggagaagagggcctgtcctggc
caggctctgctcctcactccccatgacagggccagcggcactcagggcggaggtgaggac
aactccagtggaggaggcaagaagccaaagacagaggagctggggccagcctcccagccc
cctgaaggccggccctgccagccccagacaagggcacagaagcagccaggccaagccagc
tatagcagctattcaaagcggaagcgcctcagccgtggccgggggaagaccacccacgct
tcgccctgtaagggacgcgccactcggagaaggcagcagcaggtactgcccctggatcct
gcagagcctgaaatccgactcaaatacatttcctcttgcaagaggctgagggcagacagc
cgcaccccagccttctcaccctttgtgcgggtggagaagcgagacgcgtacaccaccata
tgcactgttgtcaactccccaggggatgagccgaagcctcactggaagccatcctcctcc
gtcgcctcttcctccacctcctcctcctccttagaaccagctggggcttctctgactcca
ttccctggaggctctgtgctgcagccgagggcctccctgcccctctcttccaccatgcat
ctggggcctgtggtgtccaaggccctaagtacctcttgccttgtctgctgcctctgccaa
aacccggccaatttcaaggaccttggggatctctgtggcccctactaccctgaacactgc
ctcccaaaaaagaagccaaaactcaaggagaaggtgcggctggagggcaccttggaggag
gcgccactgcctctcgagagaacaatcccaggcctggaatgtgcagccagcaccacggct
gccacccctactacaaccaccgtcacggccaccacgaccctggggagactgtccaggcct
gagggcccagctgaccctgccaagcagggctccctgcgcaccagtgcccggggcctgtca
cggcggctgcagagttgctattgctgtgacggtcagggggatgggggtgaggaggtggcc
ccagctgacaagagccgcaaacatgaatgcagcaaagaggcccctacagaacctggtggg
gacacccaggaacactgggtacatgaggcctgtgctgtgtggaccagcggggtgtacctg
gtggccgggaagctctttgggctgcaagaggccatgaaggtagctgtggacatgccgtgc
accagctgtcatgaagccggagccaccatctcgtgctcctataaaggatgcatccacacc
taccactacccatgtgccaatgacacaggttgcacgttcactgaggagaattttactttg
aagtgccccaaacataagaggctgccgttgtaa
DBGET
integrated database retrieval system
