Apodemus sylvaticus (European woodmouse): 127693541
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Entry
127693541 CDS
T10613
Symbol
Ppfia1
Name
(RefSeq) liprin-alpha-1
KO
K26226
liprin-alpha
Organism
asyl Apodemus sylvaticus (European woodmouse)
Pathway
asyl04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
asyl00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
127693541 (Ppfia1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
asyl04131
]
127693541 (Ppfia1)
Membrane trafficking [BR:
asyl04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
127693541 (Ppfia1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LIP-1
SAM_1
SAM_2
Motif
Other DBs
NCBI-GeneID:
127693541
NCBI-ProteinID:
XP_052050443
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All DBs
Position
1:60454462..60532115
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AA seq
1222 aa
AA seq
DB search
MMCEVMPTISEAEGPPGGGGSHGSGSPSQPDADSHFEQLMVSMLEERDRLLDTLRETQET
LALTQGKLHEVGHERDSLQRQLNTALPQEFAALTKELNVCREQLLEREEEIAELKAERNN
TRLLLEHLECLVSRHERSLRMTVVKRQAQSPAGVSSEVEVLKALKSLFEHHKALDEKVRE
RLRVALERCSLLEEELGATHKELMILKEQNNQKKTLTDVMLDGNHEQESAPSTNGKRASD
GSLSHEDLAKVLELQEVIDRQAREQSQMKERLASLSSHAAELEEDLDTARKDLIKSEEMN
TKLQREVREAMAQKEDMEERITTLEKRYLAAQREATSVHDLNDKLENEIANKDSMHRQTE
DKNRQLQERLELAEQKLQQTLRKAETLPEVEAELAQRVAALSKAEERHGNIEERLRQMEA
QLEEKNQELQRARQREKMNEEHNKRLSDTVDKLLSESNERLQLHLKERMAALEDKNSLLR
EVENAKKQLEETQHDKDQLVLNIEALKAELEQMRLRGPSLHHGRPHLGSVPDFRFSVADG
HVDAYSTSAVLRRPQKGRLAALRDEPSKVQTLNEQDWERAQQASVLANVAQAFESDVDVS
DGEDDRDTLLSSVDLLSPSGQADAQTLAMMLQEQLDAINKEIRLIQEEKENTEQRAEEIE
SRVGSGSLDNLGRFRSMSSIPPYPASSLAGSSPPGSGRSTPRRGPHSPAREVDRLGVMTL
LPASREEVRDDKTTIKCETSPPSSPRPLRLDRMHKGALHTVSHEDIRDLRNSTGSQDGPV
SNPSSSNSSQDSLHKAPKKKGIKSSIGRLFGKKEKGRPGPLGKESPGQAGVSETENSSQD
ALGLSKLGGQAEKNRKLQKKHELLEEARRQGLPFAQWDGPTVVVWLELWVGMPAWYVAAC
RANVKSGAIMSALSDTEIQREIGISNPLHRLKLRLAIQEIMSLTSPSAPPTSRTTTGNVW
LTHEEMETLTATPQTTLAYGDMNHEWIGNEWLPSLGLPQYRSYFMECLVDARMLDHLTKK
DLRGQLKMVDSFHRNSFQCGIMCLRRLNYDRKELERKREESQNETRDVLVWSNDRVIRWI
LSIGLKEYANNLIESGVHGALLALDETFDFSALALLLQIPTQNTQARAVLEREFNNLLVT
GTDRRFDEDDDKSFRRAPSWRKKFRPKDIRGLASGSAETLPANFRVTSSMSSPSMQPKKV
QMDGSVSGAQRLDSATVRTYSC
NT seq
3669 nt
NT seq
+upstream
nt +downstream
nt
atgatgtgcgaggtgatgccgaccattagtgaagcagagggccccccaggaggcggtggg
agccatgggtcaggctccccttctcagccagacgccgattcgcattttgagcagctcatg
gtttccatgctggaagaacgagaccgccttctggacacactgagagagacacaagaaaca
ctagcgttaacccaggggaaactgcatgaagttggtcatgaaagagattctttgcagagg
cagctcaacactgcacttccacaggagtttgctgcgctcacaaaggaactcaatgtgtgt
agggagcagcttctggagagagaggaggaaatcgccgagctgaaggcagagaggaacaac
actaggctgctgttagagcacctagagtgtctcgtctccaggcacgagcgctctctacgg
atgacagtggtgaagaggcaggcgcagtcacctgcaggcgtgtccagtgaggtggaggtg
ctgaaagccctgaagtcactgtttgaacaccacaaagccttggatgagaaggtccgagag
agactacgagtggctctggagaggtgcagtttattagaagaagaactgggtgccacccac
aaagagctaatgattcttaaagaacagaataatcaaaagaaaacactaacagatgtgatg
cttgacggaaaccatgaacaggaaagtgcaccaagcaccaacggcaagagagcttctgat
ggttccttgagtcatgaggatcttgccaaagtgctggagctgcaggaagtcatagacagg
caggcgagagagcagagccagatgaaggagcgcctggcctccctgtccagtcatgcagca
gagctggaagaggatctggacacagctagaaaagacctcatcaagtctgaagagatgaat
acgaaactgcagcgagaagtccgtgaagcaatggcccagaaggaagatatggaggagaga
atcaccacccttgagaaacgctacctcgccgcacagcgtgaagccacgtctgtgcatgac
ctcaatgacaaacttgaaaatgaaattgcaaataaagactccatgcaccgacagacagag
gacaagaaccgccagttgcaagagcgcctggagttggcagagcagaagctgcagcagacc
ttgcgcaaagctgagacactgccagaggtggaggctgagctggcccagagggtggccgcg
ctctccaaggctgaggagagacatggcaacattgaagagaggctgcggcagatggaggca
cagctggaggagaaaaatcaggagctgcagcgggcaaggcagagagaaaagatgaatgag
gaacataataagcgcctgtctgacaccgtggacaagctgctctcggaatccaatgagagg
ctgcagcttcatctgaaagagagaatggcggctctggaggacaagaattctctactaagg
gaagttgaaaatgcaaagaagcaactagaggagacccagcatgataaggaccaacttgtc
ttgaatattgaagccctgaaggctgaactggaacagatgagactgagaggtccttcactt
catcatggccgaccccatttgggcagcgtcccggacttcaggttctctgtggcagacggg
catgtggatgcttacagcaccagtgcagtgttgcggcgcccccagaagggccggctggca
gcgctgcgggacgagccctccaaggtgcagaccctcaatgaacaggactgggaacgggcc
caacaagccagcgtcttggcaaacgtagcacaggcatttgagagtgatgttgatgtgtct
gatggtgaagatgaccgagatactctgctcagctcagttgatctgctgtcacccagtgga
caggctgatgcccagacactggccatgatgcttcaggaacagctggacgctatcaacaaa
gagatcaggctgatacaagaagagaaggagaatacagagcagcgggcagaggagatcgag
agcagagtgggcagtggaagcttggacaatcttggtcgttttagatcaatgagctccatc
cccccctaccctgcttcctcgctcgccggctcctctcctccaggcagtggccggtccaca
ccaagaagaggccctcacagccctgccagggaagtggacaggctgggtgtcatgactctg
ctgccagcttccagagaagaggtacgagacgacaagacaacaataaaatgtgaaacctcc
ccgccctcctccccgaggcccctgcgcttagacaggatgcacaagggtgcgctgcacacg
gtcagccatgaggacatcagggacctgaggaactccacaggctcccaggatggtcctgtg
agcaaccctagcagcagtaatagtagccaggactccctccacaaagccccaaagaagaag
ggcatcaagtcctccattggccgcttgtttgggaagaaggaaaaaggccggcctggtcca
ctgggcaaggagtcaccagggcaagctggtgtttcagagacagaaaattcatctcaagat
gccttgggactcagcaaactgggaggacaagctgagaaaaaccgtaaacttcagaaaaag
cacgagctgctggaggaggcccgcaggcaaggtttgccttttgcacagtgggatgggccc
acagtggtggtgtggctggagctctgggttgggatgcctgcctggtacgtggctgcttgc
cgagcaaacgtcaagagtggcgccatcatgtctgccctgtcagacaccgagatccagcgg
gagatcggcatcagcaaccccctgcacaggctgaagctgcggctggccatccaggagata
atgtcactgacgagcccttctgccccacccacatccaggacgaccacaggaaatgtctgg
ttgacacatgaagagatggaaacgctcacagccacgccacaaacgacgctagcatatggg
gacatgaaccacgagtggatcggtaacgagtggctgcccagcctgggcctgccacagtac
cgcagctacttcatggagtgccttgttgatgcccggatgctggaccacctgaccaagaaa
gacctgcgaggacagctgaagatggtcgacagcttccacagaaacagtttccagtgtgga
attatgtgcctgagaaggttgaattatgaccgaaaagaactggaaagaaaaagagaagag
agtcagaatgagactagagatgtgcttgtgtggagcaatgaccgggtgattcgctggatc
ctgtcgattggccttaaagaatatgccaacaacctaatagagagcggtgttcacggggca
cttctggccttggacgagactttcgatttcagtgccctggctctcttgttacagattcca
acgcagaatacacaggctcgagctgtcttggaaagagaattcaacaaccttttggtcaca
gggactgatcggaggtttgacgaggatgatgacaaaagcttcaggagggcaccatcctgg
aggaagaagttcagaccaaaggacatccgtggcttggcctctggctctgcagagacgctg
cctgccaacttccgggtcacctcctctatgtcatctccctctatgcagccaaagaaggtt
cagatggacggtagtgtgtccggagcacagaggttggactctgccacagtcaggacttac
tcctgctag
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