Apodemus sylvaticus (European woodmouse): 127693591
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Entry
127693591 CDS
T10613
Symbol
Vps53
Name
(RefSeq) vacuolar protein sorting-associated protein 53 homolog isoform X1
KO
K20299
vacuolar protein sorting-associated protein 53
Organism
asyl Apodemus sylvaticus (European woodmouse)
Brite
KEGG Orthology (KO) [BR:
asyl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
asyl04131
]
127693591 (Vps53)
Membrane trafficking [BR:
asyl04131
]
Protein recycling
Others
EARP complex
127693591 (Vps53)
Endosome - Golgi transport
Tethering complex
GARP complex
127693591 (Vps53)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps53_N
VPS53_C
Vps54_N
COG4_N
FBF1
GrpE
Laminin_II
Sec8_N
NBD94
TPR_CAND1
hAT-like_RNase-H
COG3_N
COG5_N
Med11
HrpJ
Motif
Other DBs
NCBI-GeneID:
127693591
NCBI-ProteinID:
XP_052050523
LinkDB
All DBs
Position
10:47572033..47703027
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AA seq
832 aa
AA seq
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MMEEEELEFVEELEAVLQLTPEVQLAIEQVFPSQDPLDQADFNAVEYINTLFPTEQSLAN
IDDVVNKIRLKIRRLDDNIRTVVRGQTNVGQDGRQALEEAQKAIQQLFGKIKDIKDKAEK
SEQMVKEITRDIKQLDHAKRHLTTSITTLNHLHMLAGGVDSLEAMTRRRQYGEVANLLQG
VMNVLEHFHKYMGIPQIRQLSERVKAAQTELGQQILADFEEAFPSQGTKRPGGPSNVLRD
ACLVANILDPRIKQEIIKKFIKQHLSEYLVLFQENQDVAWLDKIDRRYAWVKRQLVDYEE
KYGRMFPREWCMTERISVEFCHVTRTELSKIMRARAKEIEVKLLLFAIQRTTNFEGFLAK
RFSGCTLTDGTLKKLESPPPSTNPFLEDETTPEMEELALEKGDLEQPKKPKAPDNPFHGI
VSKCFEPHLYVYIESQDKNLSELIDRFVADFKAQGPPKPNTDEGGAVLPSCADLFVYYKK
CMVQCSQLSTGEPMIALTTIFQKYLREYAWKILSGNLPKTSSSSGGLTISSLLKEKEGSE
VARFTLEELCLICSILSTAEYCLATTQQLEEKLKEKVDVSLTERINLTGEMDTFSTVISS
SIQLLVQDLDAACDPALIAMSKMPWQNVEHVGDQSPYVTSVILHIKQNVPIIRDNLASTR
KYFTQFCIKFANSFIPKFITHLFKCKPISMVGAEQLLLDTHSLKMVLLDLPSIGSQVVRK
APASYTKIVVKGMTRAEMILKVVMAPHEPLVVFVDNYIKLLTDCNTETFQKILDMKGLKR
SEQSSMLELLRQRLPAPPSGTESSSTLSLMAPTPEQESSRIRKLEKLIKKRL
NT seq
2499 nt
NT seq
+upstream
nt +downstream
nt
atgatggaggaggaggaactggagtttgtggaggagctggaggccgtgctgcagctcacg
ccagaggtacaactagccatcgagcaggtattcccaagccaggaccctcttgatcaagct
gacttcaatgctgtcgagtatatcaatacccttttcccaacagagcaatctctggcaaac
attgatgatgttgtgaacaaaattagactgaaaataaggagactggatgacaatatccgg
actgtcgtaagaggtcagacaaatgtggggcaggatggaaggcaagcacttgaagaggcc
cagaaagccattcagcaactctttggcaaaatcaaggatatcaaagacaaagcagaaaag
tctgaacaaatggtgaaagagatcacccgagatattaaacagttagatcatgccaagcgc
cacctgaccacttcaatcacgaccctgaaccacctgcacatgctggctggcggggtggac
tccctggaggccatgaccaggcgcagacagtatggagaagttgctaatctccttcagggt
gtaatgaatgttctggagcactttcataagtacatgggaatcccacagatcagacagctt
tctgagagggtgaaggctgcacagacagagttaggacagcaaatcctggctgattttgaa
gaagcatttccttcacagggtaccaagaggcctggaggacccagcaatgtcctgagagac
gcgtgcctggtggctaatattttggaccccagaatcaaacaagaaatcatcaaaaagttt
attaaacagcatctatcagagtatctagtactttttcaagaaaaccaagatgtcgcctgg
ctggacaaaattgacagacgttatgcttgggtaaaacgccagcttgtggactatgaagag
aagtatggccggatgtttcctcgggagtggtgcatgacagagaggatctccgtagaattt
tgccatgtgacgaggacagaactttctaaaatcatgcgagccagagctaaggaaattgag
gtgaaattgcttctttttgcgattcagagaacaactaactttgaggggtttcttgcaaaa
cgcttctccggttgcaccctgacagatggaaccctgaaaaagctggagtccccaccacca
tctaccaatccctttctggaagatgagacaacaccagagatggaggagctggctctggag
aaaggagacttagagcaaccaaagaagcccaaagccccagacaatccgtttcatggcatt
gtttccaagtgttttgagcctcatctctacgtgtacattgagtcccaggacaaaaacctc
agcgagctgatagaccggtttgtggcagatttcaaagcccagggcccacctaagcccaac
actgacgaagggggcgctgtgctccccagctgcgctgacctctttgtctactataagaag
tgcatggtacagtgctcacagctcagcacaggcgagcccatgatcgctctgaccaccatc
ttccaaaagtacctccgagaatacgcctggaaaatcctctctggcaacctgcctaaaacc
agcagcagcagtggggggctgacaatcagtagcctcctcaaagagaaggagggctcagaa
gtggccaggttcacgctggaggagctgtgtctcatctgcagcatcctgagcactgctgag
tactgtctggctaccacccagcagctagaagaaaaactcaaagaaaaagttgatgtgagt
ctgactgaacgaattaatctcacaggagaaatggacacattcagcactgtcatctccagc
agcatccagctgttggttcaggatctagatgcagcctgtgaccctgccctgattgccatg
agcaagatgccgtggcagaacgtggagcatgttggtgaccaaagcccttatgtcacttct
gttattcttcacattaagcagaacgtccccatcatccgtgacaatctggcttccacgcgg
aaatacttcacacagttctgcattaaatttgcaaattcattcattcccaaattcatcacc
cacctcttcaagtgtaagccaatcagcatggtgggagcagagcagcttctgctggacacc
cactccctgaagatggtcctgcttgatctcccgtccattggctcacaggtggtgaggaag
gcccctgccagttacactaagattgtcgtgaaaggcatgacccgggctgaaatgatcctc
aaggtggtgatggcccctcatgaaccattggtagtatttgttgacaactacatcaaactc
cttacggactgcaacacagaaaccttccagaaaatactggatatgaagggactgaagagg
agtgaacagagcagcatgctggagcttttgcggcagaggctccctgctccaccctcgggg
acagaaagttccagcacgctgtccctaatggccccaacaccagagcaggaatcctcacgc
attcgcaaacttgagaaactgattaaaaagagactgtaa
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