Apodemus sylvaticus (European woodmouse): 127693626
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Entry
127693626 CDS
T10613
Symbol
Dhx58
Name
(RefSeq) ATP-dependent RNA helicase DHX58 isoform X1
KO
K12649
ATP-dependent RNA helicase DHX58 [EC:
5.6.2.6
]
Organism
asyl Apodemus sylvaticus (European woodmouse)
Pathway
asyl04622
RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
asyl00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
127693626 (Dhx58)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
asyl04054
]
127693626 (Dhx58)
Enzymes [BR:
asyl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
127693626 (Dhx58)
Pattern recognition receptors [BR:
asyl04054
]
Cytoplasmic pattern recognition receptors
RIG-I-like receptors
127693626 (Dhx58)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RIG-I_C-RD
RIG-I_C
ResIII
DEAD
Helicase_C
SWI2_SNF2
AAA_19
AAA_22
Zn_ribbon_4
CATASP
Cas3-like_C_2
Terminase_6N
Motif
Other DBs
NCBI-GeneID:
127693626
NCBI-ProteinID:
XP_052050578
LinkDB
All DBs
Position
10:22284268..22297090
Genome browser
AA seq
678 aa
AA seq
DB search
MELRPYQWEVILPALEGKNIIIWLPTGAGKTRAAAFVAKRHLETVDRGKVVVLVNRVHLV
NQHAEEFRRMLDKQWTITTLSGDMGSRAGFGLMARSHDLLICTAELLQLALNSAEEDEHV
DLTEFSLLVVDECHHTHKDTVYNTILSRYLEQKLKKAKPLPQVLGLTASPGTGGATKLQG
AIDHILQLCANLDTWRIMSPKDCRSQLLEHNPKPCKRYDLCQRRAQDPFGDLLKKLMSQI
HQQLEMPDLKQQFGTQMYEQQVVQLCKDAAQAGLQEQRVYALHLRRYNDALFIHDTVRAW
DALDMLQDFYDREHATKTQMVHAERWLLELFDDHKSVLSQLAAQGPENPKLEMLEGILLK
QFGSPDRTRGIVFTRTRQTASSLLLWLRQQPSLQAVTIKPQMLIGAGNTGQSTHMTQKDQ
QEVIQEFRDGTLNLLVATSVAEEGLDIAQCNVVVRYGLLTNEISMVQARGRARADQSVYS
FLATEGSREIQRELTNEALEVLMEKAVAAVQKMDPEEFKAKIQDLQLAALVKRAARAAHR
DSQQRQFPPERVQLLCINCMVAVGYGSDLRKVEGTHHVNVNPTFSIYYTTSQNPVVINKV
FKDWRPGGTIRCSNCGEVWGFQMIYKSVTLPVLKVGSMLLETPHGKIQAKKWSRVPFSIP
DFDILQDCTQSLSDLSLD
NT seq
2037 nt
NT seq
+upstream
nt +downstream
nt
atggagctgcgaccctaccagtgggaagtgatcttacctgctctggagggcaagaatatc
atcatatggctgcccacaggtgctgggaagacccgggcagcggcctttgtggccaagagg
catctagagacagtagacagaggcaaggtggtggtactggttaatagggtgcacctggtg
aaccagcatgctgaggagttcaggcgcatgttggataaacagtggaccataacaaccttg
agtggggacatgggatctcgagccggctttggcctgatggctcggagccatgacctgctc
atctgtacagcagagttgttgcagctagcactgaacagcgctgaggaggatgagcatgta
gacctcacagagttctcgctgcttgtggtggacgagtgtcaccacacccacaaggacacc
gtctacaacaccatcttgagccggtacctagaacagaagctgaagaaggcgaagcccctt
ccgcaggtcctgggtctcacagcctccccaggcactggcggggccaccaagctccaaggg
gccattgaccacattctacagctctgtgcgaatttggatacatggcgcatcatgtcacca
aaggattgccgctcccagctgctggagcataacccgaagccctgcaagcggtatgacctc
tgccagaggcgcgcacaggatccttttggagacttgctaaaaaagcttatgagtcaaatc
caccaacaactagagatgcctgacctgaagcagcaatttggaacccagatgtatgagcag
caagtggtacaactgtgcaaggacgcggcgcaggctggcctccaggaacagcgggtgtat
gcgctacatttgcggcgctacaatgatgctctatttatccacgatactgtccgtgcatgg
gacgctcttgacatgttgcaagatttctacgacagagaacacgccacaaaaacacagatg
gtgcatgctgaacgctggctgctggagctgtttgatgaccataaaagtgtgctgtcccag
ctggcggctcagggtcctgagaacccgaagctggaaatgctggaggggatcctactgaag
cagttcgggagtcctgaccgcacgcggggcatcgtcttcaccaggacccgccagacggct
tcctccctcctgctctggcttaggcagcaaccttccctacaggctgtgaccatcaagcct
cagatgctgattggagcagggaacacgggccagagcacacacatgacccagaaagaccag
caagaagtgatccaagagttcagagatggtaccctgaaccttctagtggccacgagcgtg
gcagaggagggactggatatcgctcagtgcaatgtggtggtgcgctatggactcctgacc
aatgagatctccatggtccaggcccggggtcgtgctcgagctgatcagagtgtgtactcg
ttcctggctacagagggcagtcgggagatccagcgggagctaaccaacgaggcccttgaa
gtcctgatggagaaggcagtggccgctgtacagaaaatggaccctgaggaattcaaggcc
aagatccaggacctgcagctagcagctttagttaagcgagcagcacgtgcggcccatcgg
gacagccagcagcggcagttcccaccagagcgtgtgcaacttctctgcatcaactgtatg
gtggccgtgggctacgggagtgacctgaggaaggtggagggcacccaccacgtcaatgtg
aaccccaccttctcgatctactataccacctcccagaaccctgtggtcattaacaaggtc
tttaaggactggagacctggtggaaccatcagatgcagtaactgtggggaggtctggggc
ttccagatgatctacaaatcagtgaccttgccggtgctcaaagtcggaagcatgctcctg
gagacccctcacgggaagatccaggccaaaaagtggtccagggtgccgttctccataccc
gacttcgacatcctgcaggactgcacccaaagcctgtctgatctctctctggactga
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