Apodemus sylvaticus (European woodmouse): 127693649
Help
Entry
127693649 CDS
T10613
Name
(RefSeq) ABC-type organic anion transporter ABCA8B-like
KO
K05650
ATP-binding cassette, subfamily A (ABC1), member 8
Organism
asyl Apodemus sylvaticus (European woodmouse)
Pathway
asyl02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
asyl00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
127693649
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
asyl02000
]
127693649
Transporters [BR:
asyl02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA5, 6, 8, 9, 10 subgroups
127693649
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
AAA_21
R1_ABCA1
RsgA_GTPase
SMC_N
AAA_15
AAA_29
AAA_23
Dynamin_N
MMR_HSR1
nSTAND1
Motif
Other DBs
NCBI-GeneID:
127693649
NCBI-ProteinID:
XP_052050620
LinkDB
All DBs
Position
10:12776499..12850645
Genome browser
AA seq
1617 aa
AA seq
DB search
MIKREISVHQQTCALLQKNLLKKWRLKRETLMEGMISLLLLLFLYLYPHGHEATDFSSVP
TKDLGRVDSFRQSKFMVGYMPVTNMTQQIMEKVAAAAFMADRKVLELLDEEHVKELAESR
EEIIKVIFSDTFSYQLKFQTGWRFPKWRELGDHEAHCYGNQEDVGCLISIFWKEGFVALQ
AAINAAIIETTTNHSVMEELLSVSGKYMKIHPFVSQDGIRTDFFIFTCIVSFSPIIYYAS
INVARERKRMKGWMMMMGLRDPAFWLSWGLLYAGIVFIMALSLALVVKSVQFFVLPSFVV
VFSLFLLYGLSLIALTFLMSVLVRKSFLTGLTVFLLTIFWGSLGFTALYRYLPAPVEWTL
SLFSPFAFTLGMTQLLHVDYDLYSNTPPDPDSGSNLIIATNFMLAFDVFLYLALMMYFEK
VLPNEYGHHHSPLFFLKSSFWLRPQKPAHVILEGGLDSVPSSDGSFEPVSPEFHGKESIR
IRNISKEYKGKPNKIEALKDLTLDIYEGQITAVLGHSGAGKSTLLNILSGLSVPTKGSIT
IYNNRLSEMADLENVFKIAGVCPQSNVQFDFLTVRENLRVFAKIRGIPPQDVEKEVKRIL
LELEMKNIQDILAQNLSGGQKRKLTFRIAILGDPQIFLLDEPTAGLDPFSRHRVWNLLKE
RKADRVVLFSTQFMDEADILADRKVFLSKGKLKCVGSSLFLKKKWGVGYHLSLQLKEVCV
PENITSLVKQHIPEAKLLAEGEGKLLYTLPLDTTYRFPELCQSLDSCPGLGIENYGVSMT
TLNEVFLKLEGKSAIDEPEVDIMGEGQTESSGDRERLMEMEQTLSSFTEMKKTDGMALWR
QQTCAIAKVRLLKLKHERKALLSVLMVLVVCICPLLFENITINISQRAYTWKLSPHEYFL
ASGEQPQGMLTRLLIINKTASIDDFIHSVERQNIALEVDASGARDGTDDPSYNGALIVSG
DKKSYNFSFACNTKRLNCFPVLMDILSNGLLGMVKPSAHIQLYRSVHFVNEYSNPLIYLM
KTAFWLIMTSTCPPYIAMSSVTDYKNKAWFQLRVSGLFPSAYWFGQALVDIPLYCFVFLF
VSLMDYLLRFPDPIFTTTTYSIQIPCSVGYAISLIFLTYVISFISRKGNKNSGIWSLSFF
IITLFSAVVEILDFNEGILYCLIFLIPQATLIGCLMLSMNLFFYRYISEEPTVEPFLVFL
IPFLHVFIFIFILRCLEWKFGKKTMRKDPIFRISPRNNDVYQNPEEPEDEDEDVQMERMR
TADALVSTSFDEKPVIVASCLRKEYAGKRKHCLSKKKAKIATRNVSFCVRKGEILGLLGH
NGAGKSTSLKMISGDTNLTAGQVLLNGSGEGDTLRFLGYCPQENALWPNLTVKEHLEVYA
AVRGLSRNHAAVAITRLADVLKLQDQLKSPVKTLSEGVKRKLCFVLSILGNPSILLLDEP
STGLDPEGQQQIWQAIRAIIKNTDRGALLTTHYMAEAEALCDRVAIMVSGRLRCIGSIQH
LKSKFGKDYLLEMKVKTLEQVEPLNTEVLRLFPRAARQERYSPLMVYKLPMEDVQPLSQA
FFKLERVKQTFDLEEYSLSQSTLEQVFLELSKEQELDGFQEELNSSTNWKLLPQEEA
NT seq
4854 nt
NT seq
+upstream
nt +downstream
nt
atgatcaagagagagataagtgtgcaccaacaaacttgtgctttattacagaagaacctt
cttaaaaaatggagactgaaaagagagaccttgatggaggggatgatctcgctgctcctt
ctgctcttcttgtatttgtatcctcatggtcatgaagctactgacttttcttcagtgccc
accaaggatctggggcgagtcgattcttttagacaatccaagttcatggtagggtacatg
cctgtcaccaacatgacacaacagataatggagaaggtagctgctgctgctttcatggca
gatagaaaagttttggaactgttggatgaagaacatgtcaaggaattagcagaaagtcgt
gaggaaataataaaagttattttttctgatacattctcatatcaactgaaattccaaact
ggatggagattcccaaagtggagagaactcggagaccatgaagctcattgttatggaaat
caggaagatgttggctgtctgatatcaatattctggaaggaaggatttgtggctcttcaa
gctgccatcaatgctgccatcatcgaaaccaccacaaaccattcggtgatggaggaactg
ctgtcagtttcagggaaatacatgaagatccatccttttgtcagtcaagatggaattcgg
actgatttcttcattttcacctgcatcgtttccttctccccaatcatctattatgcgtca
atcaatgttgcaagagagaggaaaagaatgaagggctggatgatgatgatgggtcttcga
gatccagcattctggctatcctggggcctgctctatgctggcattgtcttcattatggcc
ctatctctggcacttgttgtcaaatctgtccagtttttcgttctgcccagcttcgtggtt
gtctttagcctcttcctcctttacggattgtctctgattgctttgaccttcctaatgagc
gtcttggtgaggaagtctttcctcactggcctgactgtgtttcttctcaccatcttctgg
ggaagtctgggcttcacagccctgtacagatacctccctgcacctgtggaatggactctc
agtctttttagcccctttgccttcacactaggaatgacccagctcttacacgtggactat
gatttatattctaacacaccccctgatccagacagtggctcaaatctgattatagcaacc
aatttcatgctggcatttgatgtgtttttgtatctggccttgatgatgtactttgaaaaa
gttctgccaaatgaatatggacatcaccactctcccctgtttttcctgaaatcctcattt
tggctacgaccacaaaagcctgctcatgtgattcttgaaggtggattagattccgttcct
tcatcagatggctcgtttgaaccggtgtccccagaattccacgggaaagaatccatcaga
atcagaaatatttcaaaagaatacaaagggaagcctaataaaatagaagccttgaaagac
ctgacgttggacatatacgaaggccaaatcacagcagtccttggtcacagtggagctgga
aaatcaacactgttaaatattcttagtggattatctgttcctaccaaaggttccatcacc
atctataataatagattatcagaaatggctgacctagaaaacgtgttcaagatcgcagga
gtttgtccacaatccaatgttcaatttgacttccttactgtgagagaaaacctcagggtt
tttgccaaaataagaggaattcctccccaagatgtggaaaaagaggtgaaaagaattttg
ctggaattggaaatgaaaaatattcaagatatacttgctcaaaacctaagtggcggacag
aagagaaagctaactttcagaatcgccattttaggagaccctcagattttcctactggat
gagcccaccgctggactggaccccttttcaaggcaccgggtgtggaatctcctgaaggag
agaaaagccgaccgtgtggtcctcttcagcactcagttcatggatgaggctgacatcctg
gctgataggaaagtgttcctctccaaggggaagctgaagtgtgtgggctcgtctctcttt
ctgaagaagaaatggggagttgggtatcacttaagtttgcagctgaaggaagtctgtgtt
ccagaaaatatcacatcgcttgttaagcagcacatcccggaggccaagctattagctgaa
ggggaagggaaacttctctatacattacccttagacacaacttacagatttccagagctt
tgccagagtcttgacagctgtcctggactgggaattgaaaactatggtgtttccatgaca
actttgaatgaggtgttcctgaagctagaaggaaaatcagcaattgatgaaccagaggtt
gacatcatgggagaaggacaaacagagagttctggggacagagaaaggcttatggagatg
gagcagactctctcttcatttacggaaatgaagaaaacagacggtatggctctctggaga
cagcaaacctgcgctatcgcaaaggttcgcttgttgaagttaaagcacgaaaggaaagca
cttttatctgtgctcatggttctggtggtctgcatctgccctcttctttttgaaaatatc
acaataaatataagtcaaagggcttatacttggaaactttccccgcacgagtatttcctt
gcatctggagaacagccccagggtatgctcactcggttattgatcatcaataagacagca
agcattgatgacttcatccattctgtggagcgccagaacatagctttggaagtcgatgct
tctggagccagagatggcacagatgacccatcctacaacggagccctcattgtgtctggt
gataagaagagctacaacttctcgtttgcatgcaataccaagagactgaactgtttccca
gttctgatggatatccttagcaatgggctacttggaatggttaaaccgtcagcccacatc
caactctacagaagcgtgcattttgtgaatgaatattctaatcctttgatatacctgatg
aagactgcgttctggctgattatgacctccacttgccctccttatattgccatgagcagc
gtcacagactataagaacaaagcttggttccagctgcgtgtttccggcctctttccttcg
gcttactggttcgggcaggccctggtggacattcctctgtactgctttgtcttcctcttc
gtgtctttaatggactaccttttacgcttcccagatcccatatttactactacaacttac
tctatacaaatcccgtgttctgttggctatgccatatccctgatcttcttaacatacgtg
atttcgttcatttctcgcaaggggaataaaaacagcggcatttggtcacttagcttcttt
atcatcaccctgttctcagcggtggtagagatactggatttcaatgagggtatactgtat
tgcctcatctttttaataccacaagccactctgattggatgtttgatgttatctatgaat
cttttcttttatcggtacattagtgaagaaccgactgtagagccattcctggtattcctc
attcctttccttcatgttttcatttttattttcatccttcgatgtctggaatggaagttt
ggaaagaaaacaatgaggaaagaccccatctttagaatttctccaagaaacaatgatgta
tatcaaaacccagaagagccagaagatgaggatgaagatgttcaaatggagagaatgaga
acagcggatgccttagtatccaccagttttgatgagaagccagtcattgttgccagctgc
ctacgcaaagagtatgcagggaagaggaaacattgcctttccaagaagaaggctaagata
gccaccaggaatgtctcattctgtgtcaggaaaggtgagattctaggattgttgggacac
aatggagctggcaaaagtacatctcttaaaatgataagtggagacacaaatctcacagcc
gggcaggtgctactgaacgggagtggagaaggggacaccctgaggttcctggggtactgt
cctcaggagaatgctctgtggcccaacctcactgtgaaggaacacctggaggtatatgct
gcagtgaggggcctgagcagaaaccacgctgcagttgccatcacaaggttggcggatgtg
ctcaagctgcaggaccagctgaagtctcccgtgaagacgctgtcagagggagtgaagaga
aagctgtgttttgtgctcagcattctggggaacccatctatcttgcttctggatgagccg
tccactgggctggatcccgaggggcagcagcaaatatggcaagcaatcagggccatcata
aaaaatacagacaggggtgccctgctgaccacccattacatggcagaggctgaggctctg
tgtgaccgagtggccatcatggtgtccggaaggctgaggtgtataggatccatccaacat
ctcaaaagcaaatttggcaaagactacctgctggagatgaaggtgaagaccctcgagcag
gtggagcccctcaacacggaggtcctcaggcttttcccccgggctgccaggcaggaacgg
tactctcctctgatggtttacaaattaccaatggaagacgtgcaacctttatcccaagct
ttcttcaagttagagagggttaagcagacctttgacctggaagagtacagcctctctcag
tctaccctggaacaggtcttcctagagctctccaaggagcaggagctagatggctttcaa
gaagaactaaattcctccacaaactggaagctcctcccacaggaagaagcttaa
DBGET
integrated database retrieval system
