KEGG   Apodemus sylvaticus (European woodmouse): 127693685
Entry
127693685         CDS       T10613                                 
Symbol
Wipi1
Name
(RefSeq) WD repeat domain phosphoinositide-interacting protein 1
  KO
K17908  autophagy-related protein 18
Organism
asyl  Apodemus sylvaticus (European woodmouse)
Pathway
asyl04136  Autophagy - other
asyl04140  Autophagy - animal
asyl05010  Alzheimer disease
asyl05014  Amyotrophic lateral sclerosis
asyl05016  Huntington disease
asyl05017  Spinocerebellar ataxia
asyl05022  Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:asyl00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    127693685 (Wipi1)
   04136 Autophagy - other
    127693685 (Wipi1)
 09160 Human Diseases
  09164 Neurodegenerative disease
   05010 Alzheimer disease
    127693685 (Wipi1)
   05014 Amyotrophic lateral sclerosis
    127693685 (Wipi1)
   05016 Huntington disease
    127693685 (Wipi1)
   05017 Spinocerebellar ataxia
    127693685 (Wipi1)
   05022 Pathways of neurodegeneration - multiple diseases
    127693685 (Wipi1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:asyl04131]
    127693685 (Wipi1)
   03029 Mitochondrial biogenesis [BR:asyl03029]
    127693685 (Wipi1)
Membrane trafficking [BR:asyl04131]
 Autophagy
  Autophagosome formation proteins
   Atg18-Atg2 complex
    127693685 (Wipi1)
Mitochondrial biogenesis [BR:asyl03029]
 Mitochondrial quality control factors
  Mitophagy factors
   Autophagy-related proteins
    127693685 (Wipi1)
SSDB
Motif
Pfam: PROPPIN Beta-prop_EML_2 WD40_CDC20-Fz WD40_WDHD1_1st WD40_Prp19 WD40 WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_NWD2_C Beta-prop_WDR19_1st WDR55 Beta-prop_HPS5 Beta-prop_Vps41 ANAPC4_WD40 Beta-prop_VPS8 Beta-prop_RSE1_2nd Beta-prop_EML DUF5711 EIF3I Beta-prop_IFT140_1st Beta-prop_WDR35_TULP_N Beta-prop_WDR19_2nd BCAS3_WD40
Other DBs
NCBI-GeneID: 127693685
NCBI-ProteinID: XP_052050697
LinkDB
Position
10:13339329..13375846
AA seq 446 aa
MEAEATDAPPGRVEAALSCFSFNQDCTSLAIGTKAGYKLFSLSSVEQLDQVHGSNEIPDV
YIVERLFSSSLVVVVSHTKPRQMNVYHFKKGTEICNYNYSSNILSIRLNRQRLLVCLEES
IYIHNIKDMKLLKTLLDIPSNPTGLCALSINHSNSYLAYPGSQSTGEIVLYDGNSLKTVC
TIAAHEGTLAAITFNSSGSKLASASEKGTVIRVFSVPEGQKLYEFRRGMKRYVTISSLVF
SMDSQFLCASSNTETVHIFKLEHLTDSRPEEPSTWSGYMGKMFMAATNYLPAQVSDMMNQ
DRAFATGRLNFSGQKNICTLSTIQKLPRLLVASSDGHLYIYNLDPQDGGECVLIKTHSLL
SSGTAEENKENDLRPSVPPSYAATVARPSTSTASTVPGYSEDGGALRGEVIPEHEFATGP
VCLDDENEFPPIILCRGSQKGKTKQS
NT seq 1341 nt   +upstreamnt  +downstreamnt
atggaggccgaagccacagatgcccctccgggccgagtggaggcggcgctcagctgcttc
tctttcaaccaagactgcacatccctggcgattggaacgaaggccggttacaagctgttt
tctctgagttctgtggagcaacttgaccaagtccacggaagcaatgaaatccctgacgtg
tatattgtggagcgcctcttctccagtagcctggtcgtggtggtcagtcacacaaaaccg
cggcagatgaacgtgtaccacttcaagaaaggcactgagatctgtaattacaactactcc
agcaacatcttgtctattcggctcaaccgacagaggctgctggtctgcttggaagagtcc
atctatatacacaacattaaggacatgaagctattgaagaccctcctggatatcccctca
aatccaacaggtctctgtgccctctctatcaaccattccaactcttacctggcctatcct
ggaagccagagtacgggcgagattgtgctctatgatggaaactctctgaaaacagtgtgc
accatcgctgcccacgagggaaccctggccgccatcaccttcaactcttcgggctccaaa
ctagcaagtgcgtctgaaaaaggcactgtcattcgagtgttctctgttcccgaagggcaa
aagctctatgagtttcgtcgaggaatgaaaaggtatgtgacaatcagctctctggtgttc
agcatggactcgcagttcctgtgtgcctccagtaacacagaaaccgtgcacatcttcaag
ttggaacacctgaccgacagccgcccagaagagccttccacctggagcggctacatggga
aagatgttcatggcagctaccaactacctccccgcccaggtgtcggacatgatgaaccag
gacagggctttcgccacgggacgcctgaacttctctgggcagaagaacatttgcaccctg
tccacgatccagaaactgccgcgactgctagtggcctcctccgacgggcatctttacatc
tacaacctggaccctcaggatggaggagaatgcgtcttaatcaaaacccacagcttgctt
agctcaggaacagcagaagagaacaaagaaaatgacctcagaccttctgtacctccatct
tatgctgcgactgtagccaggcccagcacgtccacagcctccacggtgccaggatactct
gaggatggtggggcgctccgaggagaagttattccggaacacgagtttgcaacgggacca
gtgtgtcttgacgacgagaatgagtttccccctataatcttgtgccgtggaagtcagaag
ggcaaaacgaagcagtcctga

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