Apodemus sylvaticus (European woodmouse): 127693957
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Entry
127693957 CDS
T10613
Name
(RefSeq) ATP-binding cassette sub-family A member 17
KO
K05643
ATP-binding cassette, subfamily A (ABC1), member 3
Organism
asyl Apodemus sylvaticus (European woodmouse)
Pathway
asyl02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
asyl00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
127693957
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
asyl02000
]
127693957
Transporters [BR:
asyl02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
127693957
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
RsgA_GTPase
AAA_23
AAA_15
ABC2_membrane_2
AAA_29
AAA_22
Motif
Other DBs
NCBI-GeneID:
127693957
NCBI-ProteinID:
XP_052051225
LinkDB
All DBs
Position
10:97119440..97200096
Genome browser
AA seq
1732 aa
AA seq
DB search
MTAFKRLKLLLWKNFILKKRKTLITLLEMLMPLLFSAIVLYLRLNSMPRNKPSTNYPAVD
VSLLPVYFYNYPLKSKFQLAYIPSQSETLKAVTEAVEQTFAVDFEVLGFPSVPLFENYII
KDPKSFYVLVGIVFHHYFNSSNEPLPLVVKYDLRFSYVQRNFVSPPRHLFFQEEIEGWCT
AFLYPPNLSQAPREFSYADGGNPGYNKEGFLAIQHAVDKAIMQHHAPKAALDMFKNLHVL
VQRFPFGPHIQDPFLVILQNEFPLLLMLSFICVELIITNSILSEKERKQKEYMCMIGSES
WLHWVAWFITFFVSVLITVSVMTFLFCTKINRVAVFRNSNPTLIFIFLMCFAIATIFFAF
MMSTFFQRAHVGTVIGGVVFFFTYLPYMYITFSYHQRTYTQKILSCLFSNVAMATGVRFI
SLFEAEGTGIQWRNIGSIWGDFSFAQVLVMLLLDSSLYCLITYLVESLFPRKFGIPKSWY
IFAKKPVPAIPPLLNIGEPEKTSKGEFMQDEPMDHINTVEIQHLYKVFYTGRSKRTAIKD
LSMNLYKGQITVLLGHNGAGKTTVCSVLTGLITPSKGHAYVHGCEISKEMVKIRKSLGWC
PQHDILFDNFTVADHLYFYGQLKGLSPRGCREKTEEMLHILGLKDKQNLRSKFLSWGMKR
KLSIGIALIGGSKVLILDEPTSGMDSTSRRAIWDLLQQQKSDRTILLTTHFMDEADLLGD
RIAILAKGELQCCGSPWFLKQKYGAGYYMTIIKTPLCDASKLSKIIYHHVPNAILESSIG
EEMIFTLPKKTIPRFEALFTDLELRQKELGISTFATSVTTMEEVFIRVYKLADPSMSVLT
EKRPSHHPHPRDHRVPVDRIKCLHSRIFSVCTDRPVILNTGFSLLCQQFYAMLLKKVTYS
RRNWTLVLSVQILLPLVIIMLSLTFFNFKLRKLDNVPLELTLQTYGQTMVPFFVADNSRL
DPQLSDNFVKMLEAAGQVPLRLEGSVEDFLLKKAKEAPEDFDKLYVVAASFEELNNGTTV
KVLFNNQAYHSPGLALALVDNFLFKLLSGRNASITTINHPQPQTAMELSETILYQGPKGH
YLVVNFLFGIAFLSSSFSILTVGERSIKSKNLQFVSGVSMAAFWLSALLWDLISFLVPTL
LLVLVFLWYKEEAFAHHESIPAVVLIMMLYGWAIIPLVYTVSFSFKTPGSACVKLVVMLT
FLSISPVVLVTVTSEKDLGYTELSDSLDHIFLILPGHCLGMAFSNLYYNFELKKFCDAKN
LSEIDCNDVLEGYVVQENIYAWESLGIGKYLTALAILGLVYITLLFLTEANAFCVLKSRL
SGFLPSFCRKKSGMTFDATESEDEGVLEEAETIKRYLETLIKKNPLVVKEASKVYTEKVP
LLAVNKVSFVVKEKECFGLLGLNGAGKTSIFNMLTGEQPFTSGDAFVKGVSVKSDRAKVR
QWIGYCPEFDALLNFMTGREMLVMYARIRGIPECHIKACVDLILENLLLCVYADKLVKTY
SGGNKRMLSTGIALVGEPAVILLDEPSTGMDPVARRLLWDTVGRVRESGKTIVITSHSME
ECEALCTRLAIMVQGQFKCLGSPQRLKSKFGGGYSLQAKVWRKWQRQMLEKFKAFVNLTF
PGSILEDEHQNVVQYYLPGQNLSWAKVFGIMEGAKKDYMLEDYSISQLSLEDIFLSFTRP
QSSTKEKTQQGQAAPARPLSPSGSRPISRPPSRPSQPPKLPPSLPPSEPVLL
NT seq
5199 nt
NT seq
+upstream
nt +downstream
nt
atgacagcgttcaagaggttaaaacttcttctctggaagaatttcatcttaaagaagcgg
aagactctgataacccttctggagatgttgatgccgttactgttttctgcaattgtattg
tatcttcgtttgaatagtatgccaagaaacaagccatctaccaactacccggcagttgat
gtcagtttactgccagtatacttctacaactatcctctgaaaagtaaatttcagttggct
tatatcccttcccaaagcgaaaccttgaaagctgttaccgaggcggtggagcaaaccttt
gctgttgactttgaagttttaggctttccttcagtgcctttatttgaaaactatataatt
aaggatcccaagtctttctacgtactggtgggaattgtttttcaccattacttcaatagc
agcaacgaacctttgccgctcgtggtgaagtatgacttgcgctttagctatgttcagagg
aactttgtatcaccgccgaggcatttattttttcaagaggagatagaaggctggtgcaca
gcctttctttaccctcctaatctaagccaagcaccccgggaattttcatacgcagatggg
ggaaaccctggatacaacaaggaaggcttcctggccatacagcatgccgtagacaaagcc
atcatgcagcaccatgctcccaaagcagcattggacatgttcaagaatctccacgtcttg
gtgcagagattcccattcgggccccacatccaggacccgttcctggtgatccttcagaac
gagttccctctgctccttatgctgagcttcatctgtgttgagctcataatcaccaattcc
attttgtcggagaaggagaggaaacagaaggaatacatgtgtatgataggatcggagagc
tggctgcactgggttgcttggttcatcacattcttcgtttctgtcttaattacagtttct
gtcatgaccttccttttctgcacaaagataaacagagtggctgtgttcaggaacagtaac
cctaccctgatatttatttttctaatgtgttttgccatcgccacaattttctttgcattc
atgatgagcacattcttccaaagagcccatgtaggaactgtgataggtggcgtcgtcttc
ttcttcacttaccttccctacatgtacatcactttcagttaccaccagaggacttacacc
caaaagatactctcttgcctcttctccaatgtcgccatggcaacgggagtccggttcatc
tctctgtttgaagcagaaggcacaggcatccaatggaggaacatcggcagtatctgggga
gacttcagcttcgctcaggtgctggtgatgctcttgctggactcctctctgtactgcctg
atcacctatttggtggagtctctcttcccaagaaagtttggaatacctaagtcttggtac
atctttgccaagaagcctgttccagcaataccgccacttttgaatattggggagcctgag
aaaacttcgaaaggggagttcatgcaggatgaaccaatggatcacattaacacagttgaa
atccaacatctgtataaggtgttctatacgggaaggagtaaacgcacagccatcaaagat
ctgagcatgaacctgtacaaggggcagatcactgttcttctgggacacaacggagcaggg
aaaaccaccgtctgctcggttctgacaggtctcattactccttcaaaaggacatgcatat
gtccatggatgtgaaatttcaaaagagatggttaaaattaggaagagcctgggctggtgc
ccacaacatgacattttatttgataactttacagtagctgaccatctttatttctatggt
cagttgaaaggcctgtctcctcggggctgtcgtgagaaaacagaggagatgctgcacatc
ctcggtctgaaggacaagcagaacttgaggtccaagttcctgagttggggcatgaagcgc
aaactctccattggcatcgccctcatagggggttctaaggtactcattctggacgagccc
acctcaggcatggactctacctccaggagggccatctgggaccttcttcagcagcagaag
agtgaccgcaccatcctgctgaccactcacttcatggacgaagctgacctgctgggagac
cgcatcgccatcttggccaagggggagctccagtgttgcgggtcaccatggttcctcaag
cagaaatacggtgcaggatactatatgactataataaaaacacctctctgcgacgcctca
aagctctccaaaattatttatcaccacgtaccgaatgcaattttggagtccagcattgga
gaagaaatgatattcacacttcctaagaagaccatccccaggtttgaggctctgttcact
gacttggaactgagacagaaagagctgggaatctctacttttgccacctctgtcaccact
atggaggaagtgttcatacgagtttataagctggctgatcccagcatgagtgttttaacc
gagaagcgaccctctcaccatcctcatccccgggatcacagagttcctgttgatagaatt
aaatgtcttcactcaaggatcttctcagtgtgcactgaccggccagtgatactaaacaca
ggtttcagtctcctctgtcaacaattctatgccatgctcctgaaaaaggtgacatattct
cggcgcaactggacgctggtgctgtctgtgcagattctgctgcctctggtgattattatg
ttaagcctcacttttttcaacttcaagttaagaaaactggataatgtgcccctggagctg
accttacaaacgtacggccagaccatggttccgttttttgtggctgacaattcccgcctg
gatcctcaactctcagataattttgtaaaaatgcttgaggctgcaggacaggttcctttg
cgtcttgaaggttctgtagaggacttcctactgaagaaggcaaaggaggctcctgaggac
ttcgataagctctatgtggtggcggcgtcttttgaagaattgaataacggcacgacagtg
aaggttctgttcaataaccaggcgtaccactcccctggcctggctctagctctggtggac
aactttctcttcaagttgctttctgggcgcaatgcctccatcaccaccatcaaccatcct
cagcctcagacagccatggaactctcggagactatcctgtaccagggccccaaaggacac
taccttgttgtcaactttctttttggaatcgctttcctgtcaagctccttctccatcttg
acagtcggagagaggagcatcaagtcgaagaacctccagtttgtgagcggcgtcagcatg
gctgccttctggctctccgctctgctgtgggacctcatctccttcctcgttcccactctg
ctgctggtgctggtgtttttatggtataaggaggaggcctttgcacaccatgagagcatc
ccagccgtggtcttgataatgatgctctacggctgggctatcatccctttggtgtacaca
gtcagcttctcttttaaaactcccggcagcgcgtgtgtgaagcttgtggtaatgctcacc
ttcctgagcatcagccctgtggtcctcgtcaccgtcacaagtgagaaagacctcggctac
acggagctctcagattccctggatcatattttcctcatacttcctggacattgcctggga
atggccttctccaacttgtactacaactttgagctgaaaaagttttgcgatgctaagaac
ttgagtgaaattgactgcaatgatgttttagaaggatatgtggtccaagagaacatctat
gcctgggaatctctggggataggaaagtacctgacagccctggccatcttggggctggta
tacatcaccctgctcttcctcactgaagccaatgcattctgtgtcctgaaatccaggctc
tctggcttccttccttcgttctgcaggaaaaaatcgggaatgacctttgatgcaacagag
tctgaagatgaaggtgttctagaggaggcagaaaccatcaagcgttatttggaaacatta
ataaagaaaaacccacttgttgttaaagaagcatcaaaggtctataccgagaaggtaccc
ctgctggctgtcaacaaggtgtcctttgtcgttaaagaaaaagaatgctttggccttctt
ggtctcaatggagctgggaagacttccatcttcaacatgctgacaggagagcagcccttc
acttcaggggacgcctttgtcaagggcgtcagcgtcaagtctgacagagcgaaggtgcgg
cagtggattgggtactgtcctgagtttgatgccctgctaaacttcatgacaggaagagag
atgcttgtcatgtatgcccgtatccggggcatccctgagtgccatatcaaagcctgtgtc
gacctgatccttgagaacttactcttatgtgtgtatgcagacaagctggtgaagacctac
agcggtggcaacaagcgcatgctgagcactggcattgccctcgtgggagagcctgcagtc
atcctgctggatgagccgtctaccggcatggaccccgtggctcggcgcttgctgtgggac
accgtgggacgggtccgggaatcgggcaagaccatcgtcatcacctcccacagtatggag
gagtgtgaagccttatgcacccggctggccatcatggtgcagggccagttcaagtgcctg
ggcagcccgcagcgcctcaagagcaagttcggcggcggttactccctgcaggccaaggtc
tggaggaaatggcagcggcagatgctggagaagttcaaggcattcgtgaacctgaccttc
ccaggcagcattttggaagacgagcaccaaaacgtggttcagtactacctgcctgggcaa
aacctcagctgggcgaaggtgtttggcattatggagggagccaagaaggattacatgttg
gaagactactccatcagccagctctccctggaggacatcttcctcagcttcaccagacca
cagtcctccactaaagaaaaaacccaacaagggcaagctgccccggccagacccttgtcg
ccctctggctctaggcctatctcgaggcctccctcacgtccttctcagcctcccaaacta
cctccatctctacctccctcagagcctgtccttctgtaa
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integrated database retrieval system
