KEGG   Apodemus sylvaticus (European woodmouse): 127694166
Entry
127694166         CDS       T10613                                 
Symbol
Grin2c
Name
(RefSeq) glutamate receptor ionotropic, NMDA 2C
  KO
K05211  glutamate receptor ionotropic, NMDA 2C
Organism
asyl  Apodemus sylvaticus (European woodmouse)
Pathway
asyl04020  Calcium signaling pathway
asyl04024  cAMP signaling pathway
asyl04080  Neuroactive ligand-receptor interaction
asyl04082  Neuroactive ligand signaling
asyl04713  Circadian entrainment
asyl04720  Long-term potentiation
asyl04724  Glutamatergic synapse
asyl05010  Alzheimer disease
asyl05014  Amyotrophic lateral sclerosis
asyl05017  Spinocerebellar ataxia
asyl05020  Prion disease
asyl05022  Pathways of neurodegeneration - multiple diseases
asyl05030  Cocaine addiction
asyl05031  Amphetamine addiction
asyl05033  Nicotine addiction
asyl05034  Alcoholism
Brite
KEGG Orthology (KO) [BR:asyl00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04020 Calcium signaling pathway
    127694166 (Grin2c)
   04024 cAMP signaling pathway
    127694166 (Grin2c)
  09133 Signaling molecules and interaction
   04080 Neuroactive ligand-receptor interaction
    127694166 (Grin2c)
   04082 Neuroactive ligand signaling
    127694166 (Grin2c)
 09150 Organismal Systems
  09156 Nervous system
   04724 Glutamatergic synapse
    127694166 (Grin2c)
   04720 Long-term potentiation
    127694166 (Grin2c)
  09159 Environmental adaptation
   04713 Circadian entrainment
    127694166 (Grin2c)
 09160 Human Diseases
  09164 Neurodegenerative disease
   05010 Alzheimer disease
    127694166 (Grin2c)
   05014 Amyotrophic lateral sclerosis
    127694166 (Grin2c)
   05017 Spinocerebellar ataxia
    127694166 (Grin2c)
   05020 Prion disease
    127694166 (Grin2c)
   05022 Pathways of neurodegeneration - multiple diseases
    127694166 (Grin2c)
  09165 Substance dependence
   05030 Cocaine addiction
    127694166 (Grin2c)
   05031 Amphetamine addiction
    127694166 (Grin2c)
   05033 Nicotine addiction
    127694166 (Grin2c)
   05034 Alcoholism
    127694166 (Grin2c)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04040 Ion channels [BR:asyl04040]
    127694166 (Grin2c)
Ion channels [BR:asyl04040]
 Ligand-gated channels
  Glutamate (ionotropic)
   127694166 (Grin2c)
SSDB
Motif
Pfam: Lig_chan Lig_chan-Glu_bd ANF_receptor NMDAR2_C SBP_bac_3 DUF63
Other DBs
NCBI-GeneID: 127694166
NCBI-ProteinID: XP_052051568
LinkDB
Position
10:7238357..7250700
AA seq 1237 aa
MGGALGPALLLTSLLGAWAGLGAGQGEQAVTVAVVFGSSGPVQAQARTRLTPQNFLDLPL
EIQPLTVGVNNTNPSSVLTQICGLLGAARVHGIVFEDNVDTEAVAQLLDFVSSQTHVPIL
SISGGSAVVLTPKEPGSAFLQLGVSLEQQLQVLFKVLEEYDWSAFAVITSLHPGHALFLE
GVRAVADASYLSWRLLDVLTLELGPGGPRARTQRLLRQVDAPVLVAYCSREEAEVLFAEA
AQAGLVGPGHVWLVPNLALGSTDAPPAAFPVGLISVVTESWRLSLRQKVRDGVAILALGA
HSYRRQYGTLPAPAGDCRSHPGPVSPAREAFYRHLLNVTWEGRDFSFSPGGYLVQPTMVV
IALNRHRLWEMVGRWDHGVLYMKYPVWPRYSTSLQPVVDSRHLTVATLEERPFVIVESPD
PGTGGCVPNTVPCRRQSNHTFSSGDITPYTKLCCKGFCIDILKKLARVVKFSYDLYLVTN
GKHGKRVRGVWNGMIGEVYYKRADMAIGSLTINEERSEIIDFSVPFVETGISVMVARSNG
TVSPSAFLEPYSPAVWVMMFVMCLTVVAITVFVFEYFSPVSYNQNLTKGKKSGGPSFTIG
KSVWLLWALVFNNSVPIENPRGTTSKIMVLVWAFFAVIFLASYTANLAAFMIQEQYIDTV
SGLSDKKFQRPQDQYPPFRFGTVPNGSTERNIRSNYRDMHTHMVKFNQRSVEDALTSLKM
GKLDAFIYDAAVLNYMAGKDEGCKLVTIGSGKVFATTGYGIAMQKDSHWKRSIDLALLQF
LGDGETQKLETVWLSGICQNEKNEVMSSKLDIDNMAGVFYMLLVAMGLALLVFAWEHLVY
WKLRHSVPSSSQLDFLLAFSRGIYSCFNGVQSLPSPTRTSSPDLTAGSAQANVLKMLQAA
RDMVSTADVSSSLDRATRTIENWGNNRRAPAPATSGPRSSTPGPPGQPSPRAWGPPGGSR
TPLARRAPQPPARPAPCGPPLPDVSRASCRHAWDARWPVRVGSQGPHLSTSERRTLPERT
LLPAHCHYSSFPRAERSRRPFLPLFPEPPEPDDLPLLGPEQLARREALLRAAWARGPRPR
HASLPSSVAEAFTRSNPLPARCTGHACACPCPQSRPACRPVAQTQSLRLPSYREACVGSV
PAGVATWQPRQHVCLHTHTHLPFCWGTVCRHPPPCASHSPWLIGTWEPPSHRGRTLGLGT
GYRDSGVLEEVSREACGTQGFPRSCTWRRVSSLESEV
NT seq 3714 nt   +upstreamnt  +downstreamnt
atgggtggagccctggggcccgccctgctgctcacgtcactccttggtgcttgggcaggg
ctgggcgcagggcagggagaacaggccgtgaccgtggcagtggtgtttggcagctctggg
ccagtgcaggcccaggcccggactcgtctcaccccccagaacttcctggacctgcctctg
gagatccagcctctcaccgttggggtcaacaataccaaccccagcagcgtcctcacccaa
atctgtgggcttctgggcgctgcccgtgtccacggcatcgtctttgaggacaacgtggac
accgaggccgtagcccagctactggacttcgtctcctcccagacccacgtgcccatcctc
agcatcagcggaggctctgctgtggtcctcacccccaaggagccaggctccgccttcctg
cagctgggcgtgtccctggagcagcagctgcaggtgctgttcaaggtgctggaggaatac
gactggagcgcgttcgccgtcatcaccagcctgcacccgggacacgctctcttcctcgag
ggcgtgcgcgctgtcgccgacgccagctacctgagctggcgactgctggacgtgctcact
ctggagctgggcccgggtgggccgcgagcgcgcactcagcgcctgctgcgccaggtcgac
gcgccggtgctggtggcctactgctcccgggaagaggccgaggtgctcttcgctgaggct
gcacaggctggcctggtgggacccgggcacgtgtggttggtgcctaacctggcgctggga
agcaccgacgctccccctgcagccttcccggtgggcctcatcagtgtagtcactgagagt
tggcgccttagcctacgccagaaggtccgcgacggtgtggccattctggccctcggtgcc
cacagttatcgacgccagtacggtaccctgccagccccggctggagactgccgaagccac
ccgggacccgtcagccctgccagggaggccttctacaggcatctgctgaatgtcacctgg
gagggccgagacttctctttcagccctggtgggtacctggtccagcccaccatggttgtg
atcgccctcaaccggcaccgcctctgggagatggtgggacggtgggaccatggagtcctg
tacatgaagtatccagtgtggcctcgctacagcacttctctgcagcctgtggtggatagc
cggcacctgacagtggccacactggaagaaaggccctttgtcattgtggagagccctgac
cctggcacaggtggctgtgttcccaacaccgtgccctgccgtagacagagcaaccacacc
ttcagcagcggggacatcaccccctacaccaagctctgttgtaagggcttctgcatcgac
atcctcaaaaagctggcgagggtggtcaagttctcctacgacttgtacctggtgaccaac
ggcaaacacggcaagagggttcgcggcgtgtggaacggtatgatcggggaggtatactac
aagagggcagacatggccattggctccctcaccatcaatgaggagcgctctgagattata
gacttctctgtgccttttgtggagaccggcatcagtgtgatggtggcaaggagcaacggc
accgtctccccctcggcttttctggaaccctacagccctgccgtgtgggtgatgatgttt
gtcatgtgtctcacggtggttgccattaccgtcttcgtgttcgagtacttcagtcctgtc
agctacaaccagaacctcaccaagggcaagaaatcaggcggaccatccttcaccattggc
aagtccgtgtggttgctgtgggccctggtcttcaacaactctgttcccatcgagaacccc
cgggggaccaccagcaagatcatggtcctggtgtgggccttcttcgctgtcatcttcctc
gccagctacacggccaatctggcggccttcatgatccaggagcaatacatcgacactgtg
tcgggccttagtgacaagaagtttcagcggcctcaagaccaatacccacccttccgtttt
ggcacggtacctaacggcagcacagagaggaacattcgcagcaactaccgtgacatgcac
acccacatggtcaaattcaaccagcgctcggtggaggacgctctcacaagcctgaagatg
gggaagctggacgccttcatctatgacgctgctgtgctcaactacatggcgggcaaggac
gaaggctgcaagctggtcaccattggctctggcaaagtctttgccaccactggctacggc
attgccatgcagaaagactctcactggaaacggtccatagacctggcactcctgcagttc
ctgggggacggggagacgcagaagctggagacagtgtggctctcagggatctgccagaac
gagaagaacgaggtgatgagcagcaagctggacattgacaacatggccggcgtcttctac
atgctgctggtggccatggggctggcccttctggtctttgcgtgggagcacctggtctac
tggaaacttcgacactcagtgcccagctcatcccagctggacttcttgctggccttcagc
aggggcatctacagctgcttcaacggggtacagagcctcccgagccctacgcggacttcc
agcccggaccttacagcaggctcagcccaggccaacgtgctgaagatgctgcaggcggct
cgagacatggtgagcaccgcggacgtgagcagctctttggaccgcgccactcgcaccatc
gagaactgggggaacaaccgccgcgcgcctgctcccgccacctctggcccgcggtcatcc
accccgggtcctccgggacaaccgagtcctagagcctggggacctcccggtgggagccgc
accccgctagcgcgcagagccccgcagcctcctgctcgccccgcgccgtgcgggccgcct
ctgcccgacgtatcccgagcatcctgcaggcacgcttgggacgcgcggtggccagtgcga
gtcgggagtcagggaccgcacctctcgacctccgagcggcgtacgctcccggagcgcacc
ctgttgcccgctcactgccactacagttccttccctcgagcagagaggtcaaggcgcccc
ttcctcccgctattcccggagcccccggaaccggacgacctgccgctgctcgggccggag
cagctggctcggcgggaggctctgctgcgcgcggcctgggcccggggcccgcgccctcgc
catgcttccctgcccagctcggtggcagaggccttcactcgatccaaccctctgcctgcc
aggtgtaccggtcacgcctgcgcctgcccatgcccccaaagccggccagcctgcaggcct
gtggctcagacacagtcgttgcggctgccgtcctaccgagaagcctgtgtggggagcgta
ccagcaggggtggccacctggcagcccagacagcacgtctgcctgcacacccatacccac
ctgccgttctgctgggggactgtctgccgtcaccctccgccttgtgccagccacagcccc
tggctcattggaacctgggagcctccgtcacacagaggcaggactctggggctgggcaca
ggctacagggacagtggggttctggaagaggtcagcagggaagcctgtgggacacaaggt
tttccaaggtcctgcacctggaggcgggtctccagcctggaatcagaagtgtga

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