Apodemus sylvaticus (European woodmouse): 127694644
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Entry
127694644 CDS
T10613
Symbol
Ntn1
Name
(RefSeq) netrin-1
KO
K06843
netrin 1
Organism
asyl Apodemus sylvaticus (European woodmouse)
Pathway
asyl04360
Axon guidance
Brite
KEGG Orthology (KO) [BR:
asyl00001
]
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
127694644 (Ntn1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
asyl00536
]
127694644 (Ntn1)
Glycosaminoglycan binding proteins [BR:
asyl00536
]
Heparan sulfate / Heparin
Axon guidance molecules
127694644 (Ntn1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_N
NTR
EGF_laminin
EGF_LMN_ATRN
F5_F8_type_C
Motif
Other DBs
NCBI-GeneID:
127694644
NCBI-ProteinID:
XP_052052152
LinkDB
All DBs
Position
10:56095892..56273418
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AA seq
604 aa
AA seq
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MMRAVWEALAALAAVACLVGAVRGGPGLSMFAGQAAQPDPCADENGHPRRCIPDFVNAAF
GKDVRVSSTCGRPPARYCVVSERGEERLRSCHLCNSSDPKKAHPPAFLTDLNNPHNLTCW
QSENYLQFPHNVTLTLSLGKKFEVTYVSLQFCSPRPESMAIYKSMDYGRTWVPFQFYSTQ
CRKMYNRPHRAPITKQNEQEAVCTDSHTDMRPLSGGLIAFSTLDGRPSAHDFDNSPVLQD
WVTATDIRVAFSRLHTFGDENEDDSELARDSYYYAVSDLQVGGRCKCNGHAARCVRDRDD
SLVCDCRHNTAGPECDRCKPFHYDRPWQRATAREANECVACNCNLHARRCRFNMELYKLS
GRKSGGVCLNCRHNTAGRHCHYCKEGFYRDMGKPITHRKACKACDCHPVGAAGKTCNQTT
GQCPCKDGVTGITCNRCAKGYQQSRSPIAPCIKIPVAPPTTAASSVEEPEDCDSYCKASK
GKLKMNMKKYCRKDYAVQIHILKADKAGDWWKFTVNIISVYKQGTSRIRRGDQSLWIRSR
DIACKCPKIKPLKKYLLLGNAEDSPDQSGIVADKSSLVIQWRDTWARRLRKFQQREKKGK
CKKA
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atgatgcgcgctgtgtgggaggcgctggcggcgctagcggcggtggcgtgcctggtgggc
gcggtgcgcggcgggcccgggcttagcatgttcgcaggccaggcggcgcagcctgatcct
tgcgcggatgagaacgggcacccgcgccgctgcatcccggactttgtcaacgcggccttc
ggcaaggacgtgcgcgtgtccagcacctgcggccggcccccggcgcgctactgcgtggtg
agcgagcgtggcgaggagaggctacgctcgtgtcacctctgcaactcttcggatcccaag
aaagcgcacccgcccgcctttcttaccgatctcaacaacccgcacaacctgacgtgctgg
cagtccgagaactacctgcagttcccgcacaacgtgacgctcactctgtcgctcggcaag
aagtttgaggtgacctatgtgagcctgcaattctgctcgccgcggccagagtccatggcc
atctacaagtccatggactacgggcgcacgtgggtgcccttccagttctattccacgcag
tgccgtaaaatgtacaaccggccgcaccgcgctcccatcaccaagcagaacgagcaggag
gccgtgtgcaccgactcgcacaccgacatgcgcccgctctccggtgggctgatcgctttc
agcacgctggacgggcggccctcggcgcacgacttcgacaactcgcccgtgctgcaagac
tgggtcacggccaccgacatccgcgtggcgttcagccgcctgcacacgtttggcgacgag
aacgaagatgactcggagctggcgcgcgattcctattactatgcagtgtctgacctgcag
gttggcggccgctgcaagtgcaacggccacgcggcacgttgcgtgcgtgaccgagacgac
agtctggtgtgtgactgcaggcacaacacggccggccctgaatgcgaccgttgcaagccc
ttccactacgaccggccctggcagcgtgccacggcccgcgaggccaacgagtgcgtggcc
tgcaactgcaacctgcacgctcggcgctgcagattcaacatggagctctacaagctgtcg
ggacgcaagagcgggggtgtctgtctcaactgccgccacaacaccgcgggccgccactgt
cactactgcaaggagggcttctaccgagacatgggcaagcctatcacccaccggaaggct
tgcaaagcctgtgattgccaccctgtgggtgctgctggcaagacctgcaatcaaaccact
ggccagtgtccctgcaaggacggcgtgacgggcatcacctgcaaccgctgtgccaaaggc
taccagcagagccgctcccccatcgccccttgcatcaagattcctgtggcaccacccacc
actgcagccagcagcgtggaagaaccagaagactgtgactcctattgcaaggcctctaaa
gggaagctgaagatgaacatgaagaaatactgcaggaaggactatgccgtccagatccac
atcctgaaggcggacaaagcaggggattggtggaagttcacagtgaacatcatctctgtg
tacaagcagggcacaagtcgcattcgccgtggtgaccagagtttgtggatccgctcacga
gacatcgcctgcaagtgtcccaaaatcaagcccctcaagaagtatctgctattgggcaat
gctgaggactcgcctgaccagagtggcatcgttgcagacaagagcagcctggtgatccag
tggcgggacacatgggcacggaggctgcgcaaattccagcagcgggagaagaagggcaag
tgcaagaaggcctag
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