Apodemus sylvaticus (European woodmouse): 127694783
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Entry
127694783 CDS
T10613
Symbol
Scarf1
Name
(RefSeq) scavenger receptor class F member 1
KO
K24318
scavenger receptor class F member 1
Organism
asyl Apodemus sylvaticus (European woodmouse)
Pathway
asyl04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
asyl00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
127694783 (Scarf1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
asyl04131
]
127694783 (Scarf1)
Membrane trafficking [BR:
asyl04131
]
Endocytosis
Phagocytosis
Scavenger receptors
127694783 (Scarf1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_laminin
EGF_TEN
EGF_Teneurin
EGF_2
EGF_C8A_B_C6
EGF_PEAR1L
Motif
Other DBs
NCBI-GeneID:
127694783
NCBI-ProteinID:
XP_052052415
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All DBs
Position
10:complement(48225780..48236534)
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AA seq
826 aa
AA seq
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MRAAMGLGLVSSLLLLWARVTRGSTLDPAGQHVCTGSSPSELQCCPGWRQKDQECTIPIC
EGPDVCRKDEVCVKPGLCRCKPGFFGAQCSSRCPGQYWGHDCRETCPCHPRGQCEPATGV
CQCQPNYWGKLCEYSCTCGPHGQCDPKTGLCRCDPGWWTPMCNRQCQCNSGARCDQATGA
CICPMGRWGRRCSFSCNCHTSPCMQNSGRCTCLQGWWGPECSRKCQCVRGQCSATSGHCS
CPPGFHGVRCELPCNPGHYGAQCRESCGHCEPNATCSPVTGNCESCKPGWNGTQCKQPCP
PGTFGERCTGQCPRCRLGDPCQAETGHCQHCDPGWLGPRCENPCPLGTFGKDCSSTCPTC
VQGTCNAVTGECICSAGYWGTSCNSSCPSGFHGNNCSIPCQCPEGLCHPVSGACQLGRYG
KSALIVGILVPLLLLLMGIVCCAYCCSATRLDPKGRPERNGAAFFRMKQQVWGALTSLGS
ALPCGSLSNYKLPWVTVSHHDPEVPFNHSFIEPPSAGWASEDSFSSDPDSGEEDEAHTYF
LPPREETVPMAQEESPEASLPGSPFPPPEDASTPFPIPRTSSLARAKRPSVSFAEGTKFA
PQNGRSSGDLSSPIRKPKRFSRGAQPRPEGQEAEESPGPEQANPEEDAPTAASSGDAATS
HGQLPPGSRTVAECVETTDGGIQESPGSVATIYMLAGTPQKPEGPVWSVFRRLGNNQKDQ
AAPKVKSAIPKPLRRSLGRNQASSGLSQGSGSAPAAVLSGAMESTTVRPEEASRRPGDGT
ESLGTVQEPDAGSSSPEPGSQKQAEEKEQEEPLYENVVPMSVPPQH
NT seq
2481 nt
NT seq
+upstream
nt +downstream
nt
atgcgggccgccatggggctagggctggtgtcctcactgttgctgctctgggctcgggtg
acccggggatccacgctcgacccagctggtcagcacgtctgtacaggcagcagcccctct
gagctccagtgctgtcctggctggaggcagaaagatcaagaatgcaccatccccatctgt
gaggggcctgatgtctgcaggaaggacgaggtgtgtgtgaagcccggcctctgtcggtgt
aagcctggattcttcggagcccagtgcagctcccgctgtccaggccagtactggggccat
gactgccgcgagacctgcccttgccatccacgtggccagtgcgaaccggccaccggtgtg
tgccagtgccagcccaactactggggcaagctctgtgagtactcctgcacctgcggcccc
cacggacagtgtgacccaaagacgggcttgtgccgctgcgaccccggctggtggacaccc
atgtgtaatcgccaatgccagtgcaactcaggggcacgctgtgaccaggccactggagcc
tgcatatgcccgatgggcaggtggggccgccgttgcagcttcagctgcaactgccacacc
tcgccctgcatgcagaactctggccgctgcacatgcctgcagggctggtggggtccggag
tgtagtcgtaagtgccagtgtgtgcgaggccaatgcagcgctacttccggccactgctcc
tgccctcctggcttccatggagtccgctgtgagctgccttgcaaccctggccactatggg
gcgcagtgcagagaaagctgtggccactgtgagccgaatgccacatgctctccagtcacg
ggcaactgtgagtcctgcaagcccggctggaatgggactcagtgcaagcagccgtgccct
ccgggcacctttggtgagaggtgcactgggcagtgcccccgctgccggcttggggatccc
tgtcaagcggaaactgggcactgccagcactgcgaccctggttggctggggcccaggtgt
gagaacccttgtccgcttggtacctttgggaaggactgtagctctacctgccccacctgt
gttcaggggacttgcaatgcagtgactggagaatgtatctgcagtgctggttactggggg
accagctgcaacagttcctgcccatctggcttccacggaaacaactgctccatcccctgc
caatgcccagaggggctctgccaccctgtgtctggggcctgccagctgggccgctatggt
aaaagcgctctcattgtgggcatcctggtccctctgctgctcctcctcatgggcatcgtc
tgctgtgcctactgctgctctgctacccgcctggaccccaagggcaggcctgagagaaat
ggagctgcctttttcagaatgaagcagcaggtgtggggagccctcaccagcctgggctcg
gcactaccctgtggctccctcagtaactacaagctaccctgggtgacagtctctcaccac
gatccggaggtccccttcaaccacagcttcatcgagccgccctctgctggctgggcctct
gaggactccttctcttctgatcccgactctggagaagaggacgaagctcatacctacttc
ttgccacctcgagaagagacggtccctatggcccaagaagaatcaccagaagccagcctt
cctggaagccccttccctccccctgaagatgcctccacaccgttccccatcccacgcacg
tccagcctggctagggccaagaggccatccgtctcctttgctgaaggcactaagtttgca
ccacagaatggccgaagctctggagatctctccagccccatacgaaaacccaagagattc
tccagaggtgctcagccacgtcctgaagggcaggaggctgaggagtctccaggcccagag
caagcaaacccagaggaggatgctcctacagctgcaagctctggagatgctgccactagt
cacggccaacttccacctggtagccggacggtggccgagtgtgtggaaaccaccgatgga
ggcatccaggagagcccggggtctgtggccactatttatatgctggcagggacaccccag
aaacctgagggccctgtctggtctgtctttcgtcgtttgggaaacaaccagaaagatcag
gcggcccccaaggtgaagagtgccatcccaaagcctttgcgccgatctctgggtcggaac
caggccagctctgggctgtcccagggctctggctcagctccagctgccgtgctctccggg
gccatggagtccaccacagttaggccagaggaagcatctagacgtccgggagatggcact
gagagcttagggaccgtgcaggagccagacgccggaagcagttccccggaaccgggttcc
cagaagcaggccgaagagaaggagcaggaggagcccctgtatgagaatgttgtgcccatg
tcagtgccgccacagcactga
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