Apodemus sylvaticus (European woodmouse): 127694826
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Entry
127694826 CDS
T10613
Symbol
Rnf43
Name
(RefSeq) E3 ubiquitin-protein ligase RNF43
KO
K15694
E3 ubiquitin-protein ligase RNF43 [EC:
2.3.2.27
]
Organism
asyl Apodemus sylvaticus (European woodmouse)
Pathway
asyl04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
asyl00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
127694826 (Rnf43)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
asyl04121
]
127694826 (Rnf43)
Enzymes [BR:
asyl01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
127694826 (Rnf43)
Ubiquitin system [BR:
asyl04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
127694826 (Rnf43)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ZNRF_3_ecto
zf-RING_2
zf-C3HC4_2
zf-RING_11
zf-C3HC4
zf-rbx1
zf-RING_5
zf-RING_UBOX
zf-ANAPC11
zf_RING_Vps8
zf-RING_Vps41
zf-C3HC4_3
Motif
Other DBs
NCBI-GeneID:
127694826
NCBI-ProteinID:
XP_052052491
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All DBs
Position
10:complement(35900550..35972475)
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AA seq
785 aa
AA seq
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MSAGRQLQLAVLWPWLLMATLHAGFAHTGLVLAAAVESERSAEQKAIIRVIPLKMDPTGK
LNLTLEGVFAGVAEVTPAEGKLMQSHPLYLCNASDDDNLEPGFISIVKLESPRRAPRPCL
SLASKARMAGERGANAVLFDITEDRSAAEQLQQPLGLTKPVVLIWGHDAEKLMEFVYKNR
KAYVWIELKEPPAGANYDVWILLTVVGTVFVIILASVLRVRCHPHHSRPDPLQQRTAQAI
SQLATRRYQGSCRRARAEWPDSGSSCSSAPVCAICLEEFSEGQELRVISCLHEFHRTCVD
PWLYQHRTCPLCMFNIIEGDSFSQALGASPSYQEPGRRLHLIRQHPGHAHYHLPSAYLLG
PSRNSVTRTPRPRPFLPSQEPSMGPRHQRLPRASHLRAPEEQQHLAVSPHSYAQGWGLNR
LRCTAQHPTACPMALRRARPHDSSGSGESYCTERSGYLADGPASDSSSGPCHGSSSDSVV
NCTDISLQGIHGSSSTFGSSLSSDFDPLVYCSPEGDLQGKGMQPNVTSRPRSLDSVVPTG
ETQVSSHIHYHRHRHHHYKKQFQWHGRKPGPETGVPQSRPAASHTQLEPSLPDQQLTTPN
PTASSMLPNPQRPRALTEPASGLAEAASPSPSPSPSPSPHSLLNLQKSSLTVRHPQRKRR
GGPSEPLPSSLPQDLTVHTACPVFPHYSPSLVYPWPPEVHPLMFRPPGLDRRLLHEVPGP
CYSSSQPVWLYLNPHQPLGPCLPEERHSKWSFDTPEDRCPYSHCQVLPAQSGSEEELEEL
CEQAV
NT seq
2358 nt
NT seq
+upstream
nt +downstream
nt
atgagtgctggccgtcagctgcagctggctgtcctctggccctggctgctgatggcgacc
ctgcacgcaggcttcgcacacacaggactggtgttggcagcagcagtggagtcggaaaga
tcagcagaacagaaagctattatcagagtgatccccttgaaaatggaccccacaggaaaa
ctgaacctcactttggaaggtgtgtttgctggtgttgcagaagtgactccagcggaaggg
aagctaatgcagtcccaccccttgtacctgtgcaatgccagtgacgacgacaacctagag
cctgggttcatcagcatcgtcaagctggagagtccccgacgagctcctcgcccctgcctg
tcactggccagtaaggcccggatggctggcgagcgaggagccaacgctgtactctttgac
atcaccgaggatcgatcagcggccgagcagctgcagcagcccctgggactgactaagcca
gtggtgctgatctggggtcatgatgcggagaaactgatggagtttgtgtacaagaaccgg
aaggcctatgtgtggattgagctgaaggagccccccgctggggcaaattatgatgtatgg
atcctcctgaccgtagtggggaccgtctttgtgatcatcctggcttcggtgctgcgcgtc
aggtgccacccccaccatagcagaccggatcctcttcagcagcggacagcccaggccatc
agccagctggccaccaggaggtaccaaggcagctgtagacgggctcgagcggagtggcca
gactcagggagtagctgcagctcagcccccgtgtgtgccatctgtctggaagagttctca
gaggggcaggagctccgggtcatttcctgcctccacgagtttcatcgaacttgtgtggac
ccctggctataccagcatcggacttgccccctctgcatgttcaacatcatagagggagat
tcattttcccaggccctgggagcctctccatcttaccaagaaccaggcaggagactccac
ctcattcgccagcatcctggccacgcccactatcatctcccttctgcctacctgttgggt
ccatctaggaattcagtcacccggaccccaagacctagacccttcctgccctcccaggag
ccaagtatgggccctcggcatcagcgccttcccagggcttcacaccttcgggcgccggaa
gaacagcagcacttggcagtatccccgcactcctatgcacaaggctgggggctgaatcgc
ctccgatgtaccgctcagcatcccacagcttgcccaatggccctacgacgggccaggcct
catgacagcagcgggtctggagaaagctactgtacagaacgcagtggttacttggcagat
gggccagccagtgactcgagctcaggaccctgtcatggctcttccagtgactcagtggtc
aactgcacggacatcagcctgcagggcatccatggcagcagttctaccttcggaagctcc
ctgagcagtgactttgacccgttggtatactgtagccctgaaggggatctccaagggaaa
gggatgcaacctaatgtgacctctcgaccccgctcgctggactcagtggtacccacggga
gagacccaggtttccagtcacatacactatcaccgccaccgccaccaccactacaaaaag
cagttccagtggcatggcaggaagcctggcccagaaactggggtcccacagtccaggcct
gctgcttctcacactcagctagagccatctctccctgaccagcaactcaccacacccaac
ccaacagcttcttcaatgctccccaacccacaacggcccagggcccttacagagcctgcc
tctggcctagcagaagctgccagccccagccccagccccagccccagccccagcccccac
agtcttttgaacttacagaaatccagcctcactgtcagacacccacagagaaaacggcgg
ggtggcccatcagaacccctgccaagctctctgccccaggacttgactgtgcacacagct
tgcccggttttcccccactacagccccagtctagtgtacccttggcccccagaggttcat
ccactgatgttcagacctccaggcctggataggcggctgctacatgaagtcccaggcccc
tgttactcaagttcacagccagtgtggttgtatctgaatccccaccagcctctgggacca
tgcttacctgaagagagacattctaagtggagttttgacaccccagaggacagatgtcct
tactcacattgccaggtgctgccagcccagtctggctcggaagaggagctggaggagctg
tgtgaacaggctgtgtga
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