Apodemus sylvaticus (European woodmouse): 127695913
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Entry
127695913 CDS
T10613
Symbol
Nup54
Name
(RefSeq) nucleoporin p54 isoform X1
KO
K14308
nuclear pore complex protein Nup54
Organism
asyl Apodemus sylvaticus (European woodmouse)
Pathway
asyl03013
Nucleocytoplasmic transport
asyl05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
asyl00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
127695913 (Nup54)
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
127695913 (Nup54)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
asyl03019
]
127695913 (Nup54)
Messenger RNA biogenesis [BR:
asyl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
127695913 (Nup54)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup54
Nup54_C
Phage_tail_terminator_7
XhlA
Motif
Other DBs
NCBI-GeneID:
127695913
NCBI-ProteinID:
XP_052054143
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All DBs
Position
11:16984329..17003924
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AA seq
509 aa
AA seq
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MAFNFGAPSGTSGTSTATAAPAGGFGGFGTTTTTAGSAFSFSAPTNTGSTGLLGGTQNKG
FGFGTGFGTTTGTGTGLGTGLGTGLGFGGFNTQQQQQQQPSLGSLFSQPTQAPAQSNQLI
NTASALSAPTLLGDERDAILAKWNQLQAFWGTGKGYFNNNIPPVEFTQENPFCRFKAVGY
SCMPSNKDEDGLVVLIFNKKETDIRSQQQQLVESLHKVLGGNQTLTVNVEGIKTLPDDQT
EVVIYVVERSPNGTSRRVPATTLYAHFEQANIKTQLQQLGVTLSMTRTELSPAQIKQLLQ
NPPAGVDPIIWEQAKVDNPDSEKLIPVPMVGFKELLRRLKVQDQMTKQHQTRLDIISEDI
SELQKNQTTTMAKIAQYKRKLMDLSHRTLQVLIKQEIQRKSGYAIQAEEEQLRVQLDTIQ
GELNAPTQFKGRLNELMSQIRMQNHFGAVKSEEKYYIDADLLREIKQHLKQQQEGLSHLI
SIIKDDLEDIKLVEHGLNETIHSRGGVFS
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atggctttcaattttggggctccttcgggcacttcgggcacctctacagccaccgcggca
ccggcgggtgggtttggaggatttggaacaacaactacaactgcaggctctgcattcagc
ttttctgccccaacaaacaccggcagtacaggccttctcggtggcactcagaacaaaggt
tttggctttggtactggttttggcacaacgactggaactggcacaggtttgggcaccggt
ttgggcaccggactcggctttggaggatttaatacccagcagcagcagcagcagcagcct
tctttaggcagtctcttcagtcagcctacacaggctcctgcgcagtccaaccagctcatc
aacactgccagcgctctttctgctccaacactcttgggggatgagagagacgccatcttg
gcaaagtggaaccagttgcaggccttctggggaacaggaaaaggatatttcaataataac
attcctccagtggagtttacacaggaaaatcccttttgccgatttaaggctgtaggttat
agctgtatgcccagtaataaagatgaagatggactagtagttttaattttcaacaaaaaa
gaaacagatattagaagccaacaacagcaattggtagagtcattgcataaagttttggga
ggaaaccagacccttactgtcaatgtggagggcattaagactctacccgatgaccagacg
gaagttgtcatttatgttgttgagcgatctccaaatggcacctccagaagagttcccgca
acaacactgtatgcccacttcgagcaagccaacattaaaacccagctgcagcagcttggg
gtgaccctttctatgaccagaacagagctgtctcctgctcagatcaagcagctcttacaa
aaccctcccgccggtgttgaccctatcatttgggagcaggccaaggtggacaacccagac
tctgagaagttaattcctgtacctatggtaggtttcaaagaattgcttcgaagactgaag
gttcaagaccagatgaccaagcagcatcagaccagactagatatcatatctgaagacatt
agtgaactgcaaaagaatcaaactacaactatggccaaaatagcacaatacaagagaaaa
ctgatggatctctctcacagaaccttacaggtcctaatcaaacaggagatccaaaggaaa
agtggctatgccatccaggctgaggaagaacagttgcgggttcagctcgatactattcaa
ggggaactgaatgcgcccactcagttcaagggtcggctgaatgagctgatgtcccagatc
aggatgcagaatcactttggggctgtgaaatctgaagagaagtattacatagatgcagac
ctactacgagaaatcaagcagcatttgaaacaacaacaggaaggccttagccacttgatt
agcatcataaaagacgacctagaagacataaaactggtggaacacggcctgaatgagacc
atccatagcagaggcggtgtctttagctga
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