Apodemus sylvaticus (European woodmouse): 127696000
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Entry
127696000 CDS
T10613
Symbol
Polr2b
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB2
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
asyl Apodemus sylvaticus (European woodmouse)
Pathway
asyl03020
RNA polymerase
asyl03420
Nucleotide excision repair
asyl05016
Huntington disease
Brite
KEGG Orthology (KO) [BR:
asyl00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
127696000 (Polr2b)
09124 Replication and repair
03420 Nucleotide excision repair
127696000 (Polr2b)
09160 Human Diseases
09164 Neurodegenerative disease
05016 Huntington disease
127696000 (Polr2b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
asyl03021
]
127696000 (Polr2b)
03400 DNA repair and recombination proteins [BR:
asyl03400
]
127696000 (Polr2b)
Enzymes [BR:
asyl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
127696000 (Polr2b)
Transcription machinery [BR:
asyl03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
127696000 (Polr2b)
DNA repair and recombination proteins [BR:
asyl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
127696000 (Polr2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
DUF5817
Motif
Other DBs
NCBI-GeneID:
127696000
NCBI-ProteinID:
XP_052054371
LinkDB
All DBs
Position
11:complement(32946705..32983615)
Genome browser
AA seq
1174 aa
AA seq
DB search
MYDADEDMQYDEDDDEITPDLWQEACWIVISSYFDEKGLVRQQLDSFDEFIQMSVQRIVE
DAPPIDLQAEAQHASGEVEEPPRYLLKFEQIYLSKPTHWERDGAPSPMMPNEARLRNLTY
SAPLYVDITKTVIKEGEEQLQTQHQKTFIGKIPIMLRSTYCLLNGLTDRDLCELNECPLD
PGGYFIINGSEKVLIAQEKMATNTVYVFAKKDSKYAYTGECRSCLENSSRPTSTIWVSML
ARGGQGAKKSAIGQRIVATLPYIKQEVPIIIVFRALGFVSDRDILEHIIYDFEDPEMMEM
VKPSLDEAFVIQEQNVALNFIGSRGAKPGVTKEKRIKYAKEVLQKEMLPHVGVSDFCETK
KAYFLGYMVHRLLLAALGRRELDDRDHYGNKRLDLAGPLLAFLFRGMFKNLLKEVRIYAQ
KFIDRGKDFNLELAIKTRIISDGLKYSLATGNWGDQKKAHQARAGVSQVLNRLTFASTLS
HLRRLNSPIGRDGKLAKPRQLHNTLWGMVCPAETPEGHAVGLVKNLALMAYISVGSQPSP
ILEFLEEWSMENLEEISPAAIADATKIFVNGCWVGIHKDPEQLMNTLRKLRRQMDIIVSE
VSMIRDIREREIRIYTDAGRICRPLLIVEKQKLLLKKRHIDQLKEREYNNYSWQDLVASG
VVEYIDTLEEETVMLAMTPDDLQEKEVAYCSTYTHCEIHPSMILGVCASIIPFPDHNQSP
RNTYQSAMGKQAMGVYITNFHVRMDTLAHVLYYPQKPLVTTRSMEYLRFRELPAGINSIV
AIASYTGYNQEDSVIMNRSAVDRGFFRSVFYRSYKEQESKKGFDQEEVFEKPTRETCQGM
RHAIYDKLDDDGLIAPGVRVSGDDVIIGKTVTLPENEDELESTNRRYTKRDCSTFLRTSE
TGIVDQVMVTLNQEGYKFCKIRVRSVRIPQIGDKFASRHGQKGTCGIQYRQEDMPFTCEG
ITPDIIINPHAIPSRMTIGHLIECLQGKVSANKGEIGDATPFNDAVNVQKISNLLSDYGY
HLRGNEVLYNGFTGRKITSQIFIGPTYYQRLKHMVDDKIHSRARGPIQILNRQPMEGRSR
DGGLRFGEMERDCQIAHGAAQFLRERLFEASDPYQVHVCNLCGIMAIANTRTHTYECRGC
RNKTQISLVRMPYACKLLFQELMSMSIAPRMMSV
NT seq
3525 nt
NT seq
+upstream
nt +downstream
nt
atgtatgacgccgatgaggatatgcaatatgatgaggacgatgatgaaatcactccagat
ttgtggcaggaagcatgctggatcgtgatcagttcttattttgatgaaaaaggcttggtc
agacaacagctggattcctttgatgagtttattcagatgtctgttcaaagaattgtggaa
gatgctcccccgatcgacctacaggctgaagctcagcacgccagtggagaagttgaagag
ccgccaagatatttactgaagtttgaacaaatttacctctccaaacctactcattgggaa
agagatggtgccccctccccaatgatgccaaatgaagccaggttaagaaatctcacgtac
tctgctccgctctatgttgacataacgaagacagtgattaaggaaggtgaggagcagctg
cagactcagcaccagaaaaccttcatagggaagattccgattatgctgcgctctacgtac
tgcctgttgaatggcttaacagatcgtgacctgtgtgagctgaatgagtgtcctttggat
cccggcggctattttattattaatggatcagagaaggttctgatagctcaagagaaaatg
gcaacaaacacagtctatgtgtttgccaaaaaggattccaagtacgcctatacaggagag
tgccgctcatgcctggagaactcttcccggcccaccagtacaatatgggtcagcatgctg
gccagaggagggcagggtgcaaagaagagtgctattggccagcgcatcgtggcaacgtta
ccatacatcaagcaagaagttcccatcatcattgtgttcagagcattaggctttgtgtct
gatagagatattttagaacacatcatttatgactttgaggatccagagatgatggagatg
gttaaaccgtctctcgatgaagcgtttgtcatccaagagcagaatgttgccttaaacttc
atcggttcaagaggggcaaagcctggtgttactaaggagaaaagaattaaatatgcaaag
gaagtcttacagaaggaaatgctccctcatgttggggtcagtgacttctgtgagaccaaa
aaggcctatttcttggggtatatggttcataggttacttctagcagccttgggtagaaga
gagctagatgacagagatcactatggcaacaagagattggatcttgctgggcctctgctt
gcattcttattcagaggcatgtttaagaatttgctgaaagaagtacgaatctatgcacag
aagtttattgatcgcgggaaggactttaacttagagctggcaattaagacaaggatcata
tctgatgggctaaaatactctttagccactgggaactggggtgaccagaagaaagctcat
caagccagagctggagtgtcgcaggtattgaaccgcctgacttttgcatctactctgtct
cacctgcggcgtctgaactctcctattggcagagatggcaagctagccaagcccagacag
ttgcacaacacgttgtggggaatggtgtgtcctgctgaaacgccagagggccatgctgta
ggacttgtgaagaatttagccctgatggcttatatttcagttggatctcaaccctctcca
attttggaatttttagaagaatggagcatggaaaatttagaagaaatttcacctgcagct
atagcggatgcaaccaagatttttgttaatggctgctgggttgggatccataaagacccc
gaacagctcatgaacacactgaggaaattgcggcggcagatggacatcattgtatccgaa
gtttctatgatcagagatattcgagagcgggagattcggatctatacagatgcgggccgt
atttgtagaccgcttctgattgtagaaaagcaaaagcttcttttgaagaagagacacatt
gaccaactgaaagagagagaatataacaactacagttggcaggatctggtagccagtggg
gtagtagaatatatcgataccctggaagaggagactgtgatgctcgcaatgactccagat
gatttgcaggagaaagaagtagcttattgttccacctacacccactgtgagattcacccg
tcaatgattcttggcgtctgtgcatctattattccttttcctgatcacaaccagtccccc
agaaacacataccagtctgctatgggcaagcaggcgatgggagtgtatatcaccaacttc
catgtgcggatggacaccttggcccatgttctctactatcctcagaagccccttgtgact
acacggtctatggaatatctacggtttagagagctgccggcaggaatcaactcaattgtg
gccatcgcatcatacacgggctataatcaagaagactctgttatcatgaaccgttcagct
gtggatagaggctttttcaggtctgttttctaccgatcgtacaaagaacaagagtctaag
aaaggatttgatcaagaagaggtgtttgagaaacctacccgggagacatgccagggtatg
cggcatgccatttacgacaagttggacgatgatggtctgatagccccgggggttcgcgtc
tcaggagatgatgtgattataggcaaaacggtcaccttacctgagaacgaggatgagctg
gagagcaccaacaggcgctacaccaagagggactgcagcactttcctcagaaccagtgag
acgggtatcgtggaccaggtgatggtcactctcaaccaggagggatataaattctgtaaa
ataagggtacgctctgttagaattccgcagattggagacaaatttgctagccgacatggt
cagaagggtacttgtggtattcagtatagacaagaggacatgccattcacctgtgaaggc
ataactcctgacatcatcataaacccccacgccatcccctctcggatgacgattggtcac
ttgatcgaatgtctccaaggaaaggtctctgccaacaagggtgaaattggtgatgccact
ccgtttaatgatgctgtcaatgtgcagaagatttctaaccttttatctgactacggctac
catctcagaggaaatgaggtactctacaatgggttcactggccgaaagatcacatcacag
atttttattggccccacttactaccagcgtctgaagcatatggtggacgacaagattcat
tctcgtgctcggggacccattcagattctcaacagacagcccatggagggccgatctcgt
gacggtggcctgcgctttggagaaatggaacgagactgtcagatcgcccatggtgcagca
cagtttttaagagaaaggctgtttgaagcatcagatccgtatcaggttcacgtttgtaat
ctttgtggaatcatggcgattgccaacaccaggactcacacgtatgaatgcaggggatgc
cgcaataagacccagatttctttggtgcgaatgccgtatgcgtgcaagctgctgttccag
gagctcatgtccatgagcatcgcgccacggatgatgagcgtgtag
DBGET
integrated database retrieval system
