Apodemus sylvaticus (European woodmouse): 127696007
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Entry
127696007 CDS
T10613
Symbol
Fip1l1
Name
(RefSeq) pre-mRNA 3'-end-processing factor FIP1 isoform X1
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
asyl Apodemus sylvaticus (European woodmouse)
Pathway
asyl03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
asyl00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
127696007 (Fip1l1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
asyl03019
]
127696007 (Fip1l1)
Messenger RNA biogenesis [BR:
asyl03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
127696007 (Fip1l1)
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GFIT
Motif
Pfam:
Fip1
Motif
Other DBs
NCBI-GeneID:
127696007
NCBI-ProteinID:
XP_052054385
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Position
11:complement(35695177..35753154)
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AA seq
604 aa
AA seq
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MSAGEVERLVELSGGTGGDEEEEWLYGGPWDVHVHSDLAKDLDENEVERPEEENASANPP
SGVEEEAAENGVAKPKVTETEDDSDSDSDDDEDDVHVTIGDIKTGAPQYGSYGTAPVNLN
IKAGGRVYGNTGTKVKGVDLDAPGSINGVPLLEVDLDSFEDKPWRKPGADLSDYFNYGFN
EDTWKAYCEKQKRIRMGLEVIPVTSTTNKITAEDCTVEVTPGAEIQDGRFNLFKVQQGRT
GNSEKEAALPSTKAEFTSPPSLFKTGLPPSRNSTSSQSQTSTASRKASSSVGKWQDRYGR
AESPDLRRLPGAIDVIGQTITISRVEGRRRANENSNIQVLSDRSATEVDNNFSKPPPFFP
PGAPPTHLPPPPFLPPPPTVSTAPPLIPPPGIPITVPPPGFPPPPGAPPPSLIPTIESGH
SSGYDSRSARAFPYGNVAFPHLTSSAPSWPSLVDTTKQWDYYARREKDRDRDRDRERDRE
RERDRDRERERTRERERERDHSPTPSVFNSDEERYRYREYAERGYERHRASREKEERHRE
RRHREKEETRHKSSRSNSRRRHESEEGDSHRRHKHKKSKRSKEGKEAGSEPVPEQESTEA
TPAE
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atgtcggccggcgaggtggagcgcctggtggagctgagcggcgggaccggaggggatgag
gaggaagagtggctgtatggcggcccgtgggacgtgcatgtgcacagtgatttggcaaag
gacctagatgagaatgaagttgaaaggccagaagaagaaaatgccagtgccaatcctccg
tctggagtagaagaggaagctgctgaaaatggcgtggcgaaaccgaaagtgacagagact
gaagacgacagtgatagtgacagtgacgatgatgaagatgacgttcacgtcactatagga
gacatcaaaacaggagcaccgcagtatgggagttatgggacagcaccagtaaatcttaat
atcaaggcagggggaagagtttatggaaatacaggaaccaaagtcaaaggcgtagacctt
gatgcacctggcagcattaatggagttccactcttggaagtagatttggattcttttgaa
gataaaccatggcggaaacctggtgctgatctttcagattattttaattacggctttaat
gaagatacttggaaagcttactgtgaaaaacaaaagaggatacgaatgggactggaagtt
atacccgttacttcaaccacaaacaagatcacggccgaagactgtactgtggaagttaca
ccaggtgcagagatccaagatggcagattcaatctttttaaggtacagcaagggagaact
ggaaattcagagaaagaagcagcacttccatctacaaaagctgagtttacttctccgcca
tcattgttcaagactggcctaccaccaagcagaaacagcacctcttctcagtctcagaca
agtactgcctccagaaaagccagttcaagcgttgggaagtggcaggaccgatatgggagg
gccgagtcacccgacctaaggcgattacctggagcaattgatgtcattggtcaaacaata
accatcagccgagtagaaggaagacggcgtgcaaatgagaacagcaatatacaggtcctt
tctgacagatctgccaccgaagtagacaacaatttcagcaaaccacctccatttttccct
ccaggggctcctcctactcacctccctcctcctccattcctcccacctcctccaactgtc
agcaccgccccgcctctcattccaccaccaggtattccaataactgtaccacctccaggt
ttcccccctccaccaggcgctccacctccatctcttataccaactatagaaagtggccat
tcctctggttatgacagccgttctgcacgagcatttccatacggcaatgttgcctttccc
cacctcaccagttccgctccttcgtggccaagccttgtggacaccaccaagcagtgggac
tattacgcacggagagaaaaagaccgggaccgagaccgggacagagagcgagaccgagag
cgagagcgcgaccgggacagagagcgggagcgcacacgcgagcgggagcgcgagcgcgac
cacagccccaccccaagcgtcttcaacagtgatgaagagcgatacagataccgggaatat
gcagagagaggctacgagcgccacagagctagtcgggagaaggaagagcggcacagagag
cggcggcacagagagaaggaggagaccagacacaagtcctctcgcagtaatagtaggcgt
cgccatgaaagtgaagaaggggacagtcacagaagacacaagcacaaaaagtctaaaaga
agcaaagaaggaaaagaggctggcagcgagcctgtcccggaacaggagagcaccgaagcc
acccctgccgagtag
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