Apodemus sylvaticus (European woodmouse): 127696343
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Entry
127696343 CDS
T10613
Symbol
Pcdh7
Name
(RefSeq) protocadherin-7 isoform X1
KO
K16498
protocadherin delta 1
Organism
asyl Apodemus sylvaticus (European woodmouse)
Pathway
asyl03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
asyl00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
127696343 (Pcdh7)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
asyl01009
]
127696343 (Pcdh7)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
asyl04515
]
127696343 (Pcdh7)
Protein phosphatases and associated proteins [BR:
asyl01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
127696343 (Pcdh7)
Cell adhesion molecules [BR:
asyl04515
]
Cadherins
Protocadherins
127696343 (Pcdh7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_2
Cadherin_CELSR2_9th
Mid2
Cadherin_pro
TMEM154
KIAA1549
LYRIC
MLANA
EphA2_TM
Adeno_E3_CR2
Fibulin_C
Pox_A14
Motif
Other DBs
NCBI-GeneID:
127696343
NCBI-ProteinID:
XP_052054886
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All DBs
Position
11:complement(52376894..52793999)
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AA seq
1255 aa
AA seq
DB search
MLRMRTTGWARGWCLGCCLLLPLCFSLAAAKQLLRYRLAEEGPADVRIGNVASDLGIVTG
SGEVTFSLESGSEYLKIDNLTGELSTSERRIDREKLPQCQMIFDENECFLDFEVSVIGPS
QSWVDLFEGRVIVLDINDNTPTFPSPVLTLTVEENRPVGTLYLLPTATDRDFGRNGIERY
ELLQEPGGGGSSGEGRRLGPADSAPYPGGGGNSASGGGSGGSKRRLDAPEGGGGTSPSGR
SSVFELQVADTPDGEKQPQLIVKGALDREQRDSYELTLRVRDGGDPPRSSQAILRVLITD
VNDNSPRFEKSVYEADLAENSAPGTPILQLRATDLDVGVNGQIEYVFGAATESVRRLLRL
DETSGWLSVLHRIDREEVNQLRFTVMARDRGQPPKTDKATVVLNIKDENDNVPSIEIRKI
GRIPLKDGVANVAEDVLVDTPIALVQVSDRDQGENGVVTCTVVGDVPFQLKPASDTEGDQ
NKKKYFLHTSAPLDYETTREFNVVIVAVDSGSPSLSSNNSLVVKVGDTNDNPPVFGQSVV
EVYFPENNIPGERVATVLATDADSGKNAEIAYSLDSSVMGTFAIDPDSGDILVNTVLDRE
QTDRYEFKVNAKDKGIPVLQGSTTVIVQVADKNDNDPKFMQDVFTFYVKENLQPNSPVGM
VTVMDADKGRNAQMSLYIEENSNIFSIENDTGTIYSTMSFDREHQTTYTFRVKAVDGGDP
PRSATATVSLFVMDENDNAPTVTLPRNISYTLLPPSSNVRTVVATVLATDSDDGINADLN
YSIVGGNPFKLFEIDPTSGVVSLVGKLTQKHYGLHRLVVQVNDSGQPSQSTTTLVHVFVN
ESVSNATVIDSQIVRSLHTPLTQDIAGDPSYEISKQRLSIVIGVVAGIMTVILIILIVMM
ARYCRSKSKNGYEAGKKDHEDFFTPQQHDKSKKPKKDKKNKKSKQPLYSSIVTVEASKPN
GQRYDSVNEKLSDSPSMGRYRSVNGGPGSPDLARHYKSSSPLPTVQLHPQSPTAGKKHQA
VQDLPPANTFVGAGDNISIGSDHCSEYSCQTSNKYGKQPFRRVTFSVVSQPQDPHQGSLQ
SCYDSGLEESETPSSKSSSGPRLGALPLPEDNYERTTPDGSVGEAEHMENDSRPLPDVAL
TGKCTRECDEYGHSDSCWMPVRTSPERKKSQPKLSTFMPVDERGSQEKLANGEAAIMGDR
NRNLLNKKLTSSYETFSAASFSKNEEANPEDIPLTKTGEYKPSPVNTLTRREVYL
NT seq
3768 nt
NT seq
+upstream
nt +downstream
nt
atgctgaggatgcggaccacgggatgggcgcgcggctggtgcttgggctgttgtctcctt
ctgccgctctgcttcagcctggccgccgccaaacagctgctccggtatcggctggccgag
gagggccccgccgacgtgcggatcggcaatgtggcctcggacctgggcatcgtgaccggc
tccggcgaggtgactttcagccttgagtctggttctgagtatctgaagattgacaacctt
accggcgagctgagcaccagcgagcggcgcatcgaccgagagaaactgccccaatgtcag
atgatcttcgacgagaacgaatgtttcctggacttcgaggtgtcggtgatagggccctcg
cagagctgggtggacctgtttgagggtcgggtcatcgtgctggacatcaacgataacacg
cccaccttcccgtcgccggtgctcacgctcacggtggaggagaaccggcctgtaggcacg
ctctacctgctgcccacggccaccgatcgtgactttggtcgcaatggcatcgagcgctac
gagctgctccaggagcccgggggtggcggcagcagcggcgagggaaggcgcttggggccg
gcggacagcgccccctacccagggggcggcgggaacagcgcgagcggcggcggctctgga
ggctccaagcggcggctggacgcgcctgagggtggcggcgggactagtcctagtggccga
agcagtgtgtttgagctgcaggtggcagacactccagacggcgagaaacaaccgcagttg
atagtgaagggggcgctggaccgggagcagagagattcctatgagctgaccctccgagtg
cgcgatgggggcgacccacctcggtcctcgcaggccatcttgcgggtgctcatcaccgac
gtaaatgacaacagcccccgcttcgagaagagcgtgtatgaggctgacctagctgagaac
agcgctccgggcacccccatcctacagttgcgcgccaccgatttggatgtaggggtcaat
ggacagatcgagtatgtatttggggctgccacggagtcggtaagacggctactgcgcctg
gatgaaacctcgggctggctcagtgtcttacaccgtatcgaccgcgaggaagtgaaccag
ttgagattcacagtaatggctcgtgaccgcgggcaaccccccaagaccgataaggccacc
gtggtcctcaacatcaaagatgagaatgacaacgttccctccatcgaaatccggaagata
gggcgcatcccacttaaggacggggtagccaacgtggccgaagacgtcctggtggacacc
cccatcgccctggttcaagtgtctgacagagaccaaggcgagaacggggtagtcacctgt
accgtagtgggagatgtacccttccagcttaagccagccagcgacacagagggcgatcag
aacaagaaaaagtacttcctgcacacatcggccccactagactatgagaccacccgggag
ttcaacgtagtcatagtagctgtggactctggcagtcccagcctctccagcaacaattcc
ttggtggtcaaggtgggagacactaatgacaaccctcctgtctttggccagtcggtggtt
gaggtttactttccagagaacaacattcccggggagagggtagccacggtgctggcgaca
gatgctgacagcgggaagaatgcagagatcgcctactcgctggactcctcagtgatgggg
acttttgccatcgatcccgattctggagacatcctggtcaatacagtactggaccgggag
cagactgacaggtatgagtttaaagttaatgccaaagacaaaggcatccctgtgctgcaa
ggcagcaccacggtgattgtgcaggtggctgataaaaatgacaatgaccctaagtttatg
caggatgtctttaccttttatgtgaaggaaaacttgcaacccaacagccctgtggggatg
gtcaccgtgatggatgctgacaagggacggaatgcacagatgagcctgtacatagaggag
aacagtaacattttttctatcgaaaatgacacagggaccatttactccacaatgtctttt
gacagggaacatcagactacatacactttcagagtgaaggctgtggatgggggagatcct
cccaggtcggccacagccaccgtctctctctttgtgatggatgaaaatgacaatgctccc
accgttacccttcccagaaacatttcctacacgttgctgccaccttcaagtaatgtcagg
acagtagtagctacagtgctagcaacagacagtgatgacggcatcaatgcggacttgaac
tacagcattgtgggagggaatcctttcaaactgtttgagattgatcccaccagtggtgtg
gtttccttagtgggaaaactcacccaaaagcattatggcttgcacaggctggttgtgcaa
gtgaatgacagcggccagccttcccagtccactacgactttggtacatgtatttgtcaat
gaaagtgtttccaatgcaactgtgattgactcccagatagttcgaagtttgcatacccca
ctcacccaggatatagctggtgatccaagctatgaaattagcaaacagaggctcagtatc
gtcatcggggtggttgctggcattatgacagtaattctaatcattttaattgtcatgatg
gcgagatactgtaggtccaaaagtaaaaatggctacgaagctggcaaaaaagaccatgaa
gacttttttacaccccagcagcacgacaaatctaaaaagcctaaaaaggacaagaaaaac
aaaaaatctaagcagccactctacagcagtattgtcactgtcgaagcttctaaaccaaat
ggacagaggtatgatagtgtcaatgagaagctgtcagacagcccaagcatgggccgatac
cgatctgttaacggtgggcctggcagtcccgacctggcaaggcattacaaatccagttcc
ccattgcctactgtccagcttcacccccagtcaccaaccgcagggaaaaaacatcaagct
gtacaagatctaccaccagccaacacatttgtgggagcaggagacaacatctcaatcgga
tcagatcactgctctgagtacagctgtcaaaccagtaacaagtatggcaaacagccattt
cgtagagtgacgttttctgttgtgagtcagcctcaggacccacatcaggggtcactgcag
agttgctatgacagcgggctggaggagtcagaaacaccaagcagtaagagttcatcaggg
ccaagactgggtgcccttccactcccagaggacaactatgagaggaccacgccggatggc
agtgttggtgaggcagagcatatggaaaatgattcaaggcctcttccggatgtagcgctg
actggcaagtgcacccgtgaatgtgacgagtatggccattcagactcctgctggatgcca
gtgcgcacgtccccagagaggaagaagagccagcccaaactctccactttcatgcctgtt
gatgaacgaggaagccaggaaaagctggccaatggcgaggctgccatcatgggtgaccgc
aacagaaacctcctgaacaaaaagttgacctcatcctatgagaccttcagtgcagctagt
ttcagcaaaaatgaggaagccaaccctgaggatattcctttaacaaaaacaggggaatat
aagccatctcctgtcaacactctcactagaagagaagtttatctgtag
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