Apodemus sylvaticus (European woodmouse): 127696419
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Entry
127696419 CDS
T10613
Symbol
Sptbn1
Name
(RefSeq) spectrin beta chain, non-erythrocytic 1 isoform X1
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
asyl Apodemus sylvaticus (European woodmouse)
Pathway
asyl04517
IgSF CAM signaling
asyl04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
asyl00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
127696419 (Sptbn1)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
127696419 (Sptbn1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
asyl04812
]
127696419 (Sptbn1)
Cytoskeleton proteins [BR:
asyl04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
127696419 (Sptbn1)
Intermediate filaments
Intermediate filament-binding proteins
127696419 (Sptbn1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
CAMSAP_CH
SLATT_6
PH_11
SOS1_NGEF_PH
Motif
Other DBs
NCBI-GeneID:
127696419
NCBI-ProteinID:
XP_052055120
LinkDB
All DBs
Position
11:complement(105680323..105849885)
Genome browser
AA seq
2363 aa
AA seq
DB search
MTTTVATDYDNIEIQQQYSDVNNRWDVDDWDNENSSARLFERSRIKALADEREAVQKKTF
TKWVNSHLARVSCRITDLYADLRDGRMLIKLLEVLSGERLPKPTKGRMRIHCLENVDKAL
QFLKEQRVHLENMGSHDIVDGNHRLTLGLIWTIILRFQIQDISVETEDNKEKKSAKDALL
LWCQMKTAGYPNVNIHNFTTSWRDGMAFNALIHKHRPDLIDFDKLKKSNAHYNLQNAFNL
AEQHLGLTKLLDPEDISVDHPDEKSIITYVVTYYHYFSKMKALAVEGKRIGKVLDNAIET
EKMIEKYESLASDLLEWIEQTIIILNNRKFANSLVGVQQQLQAFNTYRTVEKPPKFTEKG
NLEVLLFTIQSKMRANNQKVYMPREGKLISDINKAWERLEKAEHERELALRNELIRQEKL
EQLARRFDRKAAMRETWLSENQRLVSQDNFGFDLPAVEAATKKHEAIETDIAAYEERVQA
VVAVARELEAENYHDIKRITARKDNVIRLWEYLLELLRARRQRLEMNLGLQKIFQEMLYI
MDWMDEMKVLLLSQDYGKHLLGVEDLLQKHALVEADIAIQAERVRGVNASAQKFATDGEG
YKPCDPQVIRDRVAHMEFCYQELCQLAAERRARLEESRRLWKFFWEMAEEEGWIREKEKI
LSSDDYGKDLTSVMRLLSKHRAFEDEMSGRSGHFEQAIKEGEDMIAEEHFGSEKIRERII
YIREQWANLEQLSAIRKKRLEEASLLHQFQADADDIDAWMLDILKIVSSNDVGHDEYSTQ
SLVKKHKDVAEEITNYRPTIDTLHEQASALPQAHAESPDVRGRLAGIEERYKEVAELTRL
RKQALQDTLALYKMFSEADACELWIDEKEQWLNNMQIPEKLEDLEVIQHRFESLEPEMNN
QASRVAVVNQIARQLMHSGHPSEKEIRAQQDKLNTRWSQFRELVDRKKDALLSALSIQNY
HLECNETKSWIREKTKVIESTQDLGNDLAGVMALQRKLTGMERDLVAIEAKLSDLQKEAE
KLESEHPDQAQAILARLAEISDVWEEMKTTLKNREASLGEASKLQQFLRDLDDFQSWLSR
TQTAIASEDMPNTLTEAEKLLTQHENIKNEIDNYEEDYQKMRDMGEMVTQGQTDAQYMFL
RQRLQALDTGWNELHKMWENRQSLLSQSHAYQQFLRDTKQAEAFLNNQEYVLAHTEMPTT
LEGAEAAIKKQEDFMTTMDANEEKINAVVETGRRLVSDGNINSDRIQEKVDSIDDRHRKN
REAASELLMRLKDNRDLQKFLQDCQELSLWINEKMLTAQDMSYDEARNLHSKWLKHQAFM
AELASNKEWLDKIEKEGMQLISEKPETEAVVKEKLTGLHKMWEVLESTTQTKAQRLFDAN
KAELFTQSCADLDKWLHGLESQIQSDDYGKDLTSVNILLKKQQMLENQMEVRKKEVEELQ
SQAQALSQEGKSTDEVDSKRLTVQTKFRELLEPLNERKHNLLASKEIHQFNRDVEDEILW
VGERMPLATSTDHGHNLQTVQLLIKKNQTLQKEIQGHQPRIDDIFERSQNIITDSSSLNA
EAIRQRLADLKQLWGLLIEETEKRHRRLEEAHKAQQYYFDAAEAEAWMSEQELYMMSEEK
AKDEQSAVSMLKKHQILEQAVEDYAETVHQLSKTSRALVADSHPESERISMRQSKVDKLY
AGLKDLAEERRGKLDERHRLFQLNREVDDLEQWIAEREVVAGSHELGQDYEHVTMLQERF
REFARDTGNIGQERVDTVNGMADDLINSGHSDAATIAEWKDGLNEAWADLLELIDTRTQI
LAASYELHKFYHDAKEIFGRIQDKHKKLPEELGRDQNTVETLQRMHTTFEHDIQALGTQV
RQLQEDAARLQAAYAGDKADDIQKRENEVLEAWKSLLDACEGRRVRLVDTGDKFRFFSMV
RDLMLWMEDVIRQIEAQEKPRDVSSVELLMNNHQGIKAEIDARNDSFTACIELGKSLLAR
KHYASEEIKEKLLQLTEKRKEMIDKWEDRWEWLRLILEVHQFSRDASVAEAWLLGQEPYL
SSREIGQSVDEVEKLIKRHEAFEKSAATWDERFSALERLTTLELLEVRRQQEEEERKRRP
PSPEPSTKVSEEAESQQWDTSKGDQVSQNGLPAEQGSPRMAGTMETSEMVNGAAEQRTSS
KESSPVPSPTSDRKAKSALPAQSAATLPARTLETPAAQMEGFLNRKHEWEAHNKKASSRS
WHNVYCVINNQEMGFYKDAKSAASGIPYHSEVPVSLKEAICEVALDYKKKKHVFKLRLSD
GNEYLFQAKDDEEMNTWIQAISSAISSDKHDTSASTQSTPASSRAQTLPTSVVTITSESS
PGKREKDKEKDKEKRFSLFGKKK
NT seq
7092 nt
NT seq
+upstream
nt +downstream
nt
atgacgaccacggtagccacagactacgacaacattgagatccagcagcagtacagcgac
gtgaacaaccgctgggatgtggacgactgggacaatgagaacagctctgcacggctcttc
gagcgctcccgcatcaaggccctggcggatgagcgtgaagccgtacagaagaagaccttc
accaaatgggtcaactcccaccttgcccgcgtgtcgtgccgcatcacagatctgtacgcc
gaccttcgagatggacggatgctcatcaagctgctggaggtgctctctggagagaggctg
cctaaacccactaagggacggatgcggatccactgtctggagaatgtcgacaaggctctt
cagttcctgaaagagcagagagtccatcttgagaacatgggctcccatgacattgtggat
gggaaccaccggctgaccctcggcctcatctggactatcatcctgcgcttccagatccag
gatatcagtgtggagactgaagataacaaagagaaaaagtctgctaaggatgccttgctg
ctgtggtgccagatgaagacagctgggtaccccaatgtcaacattcacaatttcaccact
agctggagggatggcatggccttcaatgccctgatacacaaacaccggcctgacctgata
gattttgataaactgaagaaatctaatgcacactacaatctgcagaatgcatttaacctg
gcagagcagcacctcggcctcactaaactgttagaccctgaagatatcagtgtggaccac
cctgatgagaagtctatcatcacatacgtggtgacgtactaccactacttctccaagatg
aaggccttggctgttgaaggaaagcgcattggaaaggtgcttgataatgctatagaaaca
gagaaaatgattgagaagtacgagtcacttgcttctgaccttctggagtggattgaacaa
acgatcatcatcctaaacaaccgcaaatttgctaattcactggtcggggtccagcagcag
cttcaggcatttaacacgtaccgcacagtggagaaaccacctaagtttactgagaagggg
aatttggaagtgctgcttttcacaattcagagcaagatgagagctaataatcagaaggtc
tacatgccccgggaagggaagctcatctctgatatcaacaaggcctgggaaagactggaa
aaagcagaacacgagcgagaactggctctgcggaacgagctcatacggcaggaaaaactg
gaacaacttgcccgcagattcgatcgcaaggcagctatgagggagacgtggctgagcgaa
aaccagcgtcttgtgtcccaggacaactttggatttgaccttcctgcagttgaggctgcc
accaaaaaacatgaggccattgaaacagacatcgctgcttatgaagaacgagtccaggct
gtggtggccgtggccagggagctggaagccgagaactaccatgacatcaagcgcatcaca
gcgaggaaggacaatgtcatccggctctgggaatacttgctggaactgctcagggccagg
aggcagcgtctcgagatgaacctgggattgcaaaagatattccaggaaatgctttatata
atggactggatggatgaaatgaaggtgctattgctgtctcaagactatggcaagcactta
cttggggttgaagacttgttacagaagcatgccttggttgaagcagacattgcaatccaa
gcagagcgtgtaagaggcgtgaatgcctctgcccagaagtttgcaacagatggggaaggc
tacaagccatgcgacccccaggtaatccgagaccgcgttgcccacatggagttctgctat
caagagctttgtcagctggcagccgagcgtagggctcgcctggaagagtcccgtcgcctc
tggaagttcttctgggagatggcagaagaggaaggctggatacgggagaaggagaagatc
ctgtcctctgacgactacgggaaagacttgacgagtgtcatgcgcctgttgagcaagcac
cgggcatttgaggatgagatgagtggccggagcggccactttgagcaggccattaaagaa
ggtgaagacatgattgcagaggaacacttcggatctgaaaagatccgcgagagaatcatt
tacatccgggagcagtgggccaacctggaacagctctccgccattaggaagaagcgccta
gaggaggcctcattgctgcaccagttccaggctgacgctgatgatattgatgcttggatg
ttggatatactcaagattgtctccagcaatgatgtgggccatgatgagtactccacacag
tctctggtcaagaagcataaagatgtagcagaagagatcaccaactacaggcccaccatt
gacacgctgcatgagcaagccagcgcccttccacaagcacatgcagagtctccagatgtg
cggggccggctggcaggaattgaggagcgctacaaggaggtggcagagttgacccggcta
aggaagcaggctctgcaggacaccctggccctctacaagatgttcagtgaggctgatgcc
tgtgagctctggattgacgagaaggagcagtggctcaacaacatgcagatcccggagaag
ctggaggacctggaagtcatccagcacagatttgagagcctagaaccagaaatgaacaac
caggcttcccgggttgctgtggtgaaccagattgcacggcagctgatgcacagtggccac
cccagtgaaaaggaaatcagagctcagcaagacaaactcaacacgaggtggagtcagttc
agagaactggtggacaggaagaaggatgctcttctgtcggccctgagcatccagaactac
caccttgaatgcaacgaaaccaaatcctggatccgggagaagaccaaggtcatcgagtct
acccaagacctaggcaatgacctggcaggtgtcatggccctgcagcgcaagctgactggc
atggagcgagacttggtggccattgaggcgaagctgagtgacctgcagaaagaagccgag
aagctggagtccgagcaccctgaccaggctcaagctatcctggctcggctggccgagatc
agtgacgtgtgggaggagatgaagacaaccctgaagaaccgagaggcctcactgggagag
gccagcaagctgcagcagttcctgcgggacttagatgacttccagtcttggctctccagg
acccagactgctattgcctcagaggacatgcccaacaccctgactgaggcagagaagctt
ctcacacagcacgagaatatcaaaaatgagattgacaattatgaggaagactaccagaag
atgcgggacatgggcgagatggtcacccagggacagactgatgcccagtacatgtttctg
cggcagcggctgcaggccttggacaccggctggaatgagctccacaaaatgtgggagaac
aggcagagtctcctgtcccagtcccatgcctaccagcagttcctcagggacaccaaacaa
gctgaagccttccttaataaccaggagtatgttttggctcatactgaaatgcctaccacc
ctggaaggggctgaagcagccattaaaaagcaggaggacttcatgaccaccatggatgcc
aatgaggagaagatcaatgctgttgtggagactggccggagactggtgagcgatgggaac
atcaactctgaccgcatccaggagaaggtggactctattgatgacagacacaggaagaat
cgagaagcagccagtgaacttttgatgaggttaaaggacaaccgtgatctacagaaattc
ctgcaagattgtcaagagctgtccctctggatcaatgaaaagatgcttacagctcaggac
atgtcttatgatgaagccagaaacctgcacagtaaatggctaaagcatcaagcatttatg
gcagaacttgcatccaacaaagaatggcttgacaaaattgagaaggaaggaatgcagctt
atttcagaaaagccagaaacagaagctgtggtaaaggagaaactcactggtttacataaa
atgtgggaagtccttgaatccacaacccagaccaaggcccagcggctctttgatgcaaat
aaggcggagcttttcacgcagagctgcgcagatcttgacaaatggctacatggcctggag
agccagattcaatctgacgactatggcaaagaccttaccagtgtcaatattctgctgaaa
aagcaacagatgctggagaatcagatggaagtgcggaagaaggaggtcgaggagctgcag
agccaagcccaggccctgagtcaggaggggaagagcacagacgaggtggacagcaagcgc
ctcaccgtgcagaccaagttcagggagcttctggagcccctgaatgagaggaagcataac
ctgttagcatccaaggagatccaccagttcaacagggacgtggaggacgagatcctgtgg
gttggcgagaggatgcctttggcaacttctacagatcatggccataaccttcaaaccgtg
cagctgttaataaagaaaaaccagaccctccagaaagaaatccagggacaccagcctcgt
attgatgacatctttgagaggagtcagaacatcatcacagacagcagcagcctcaatgcc
gaggctatcaggcagaggcttgctgacctgaagcagctgtgggggctcctcatcgaggag
actgagaaacgccacagacggctggaggaggcacacaaggcccagcagtactactttgac
gcagctgaagcagaggcttggatgagtgaacaggaactgtacatgatgtctgaggaaaag
gccaaggatgagcagagtgctgtctccatgctgaaaaagcaccagattttggaacaagct
gttgaggactatgcggagacagtacaccagctctccaagacgagcagggcgctggtggct
gacagccatcccgaaagtgagcgtattagcatgcggcagtcaaaggtcgacaaactgtat
gctggcctgaaggaccttgctgaagagaggagagggaaacttgatgagaggcacaggctg
ttccagctcaacagggaggtcgatgacctggaacagtggatcgccgagagggaagtggtc
gcaggctcccatgagttggggcaggactatgagcatgtcacgatgttacaagaacggttc
cgagaatttgctcgagacacaggaaacattgggcaggagcgcgtggatacagtcaatggc
atggcggatgacctcatcaactctgggcattcagatgctgccaccattgctgagtggaag
gacggcctgaacgaagcctgggctgacctcctggagctcattgacacgagaacacagatc
cttgctgcctcctatgaactacataagttttaccacgatgccaaggagatctttggccgc
atccaggacaaacacaagaaactccctgaggagcttggaagagatcagaacactgtggag
actttgcagaggatgcacaccacctttgagcatgacatccaagctctgggcactcaggtg
aggcagctgcaggaggatgcagcccgcctccaggcagcctatgcaggggacaaggctgat
gacatccagaagcgtgagaatgaggtcctggaagcctggaagtccctgctggatgcttgt
gagggtcgcagggtgcggctggtagacacaggagacaaattccgcttcttcagcatggtg
cgtgacctcatgctctggatggaagatgtcatccggcagatcgaggcccaggagaaacca
cgggatgtgtcatctgttgaactgttaatgaataatcatcaaggtatcaaagctgaaatc
gatgctcgtaatgacagttttacagcttgcattgaacttgggaaatccctgctggcaagg
aagcactatgcttctgaggagatcaaggaaaagttactgcagttgacggagaaaagaaaa
gaaatgattgacaagtgggaagaccggtgggagtggctcagactgattttggaagtccat
cagttctcaagggatgccagtgtggcagaggcttggctgcttggacaggagccataccta
tccagccgagaaattggccagagtgtagacgaagtggagaagcttattaagcgccatgag
gcatttgaaaagtctgcagcgacctgggacgagagattctctgccctggaaaggctgacc
acattggagctactggaagtgcgcagacagcaagaggaagaagaaagaaagaggcggcca
ccttctccggagccaagcacgaaggtttcagaggaggctgagtcccagcaatgggatact
tcaaaaggagaccaagtttcccagaatggtttgccggctgagcagggatctccacggatg
gcaggaaccatggaaacgagtgaaatggtcaacggtgctgctgagcagaggacgagctcc
aaagagtccagtcctgttccctctcccacctcggaccgaaaggccaaatctgcacttcca
gcccagagtgctgccaccctgccagccaggaccctggagacgcctgcggcccagatggaa
ggcttcctcaatcggaagcatgagtgggaggcccacaataagaaagcctcgagcaggtcc
tggcacaatgtgtattgtgtcataaataaccaagaaatgggcttctataaagatgccaag
agtgctgcttctggcatcccttaccacagcgaagtccctgtgagtttgaaagaggccatc
tgtgaagtggcccttgattacaagaagaagaagcacgtgttcaagctaagactaagtgac
ggaaacgagtacctcttccaagccaaagatgacgaggaaatgaacacatggatccaggct
atctcctctgccatctcctctgacaaacacgacacatccgccagcacccagagtacgcca
gcatccagccgggcccagaccttaccgaccagcgtcgtcaccatcaccagcgagtccagt
cctggcaagagggagaaggacaaagagaaagacaaagagaagcggtttagccttttcggc
aagaagaagtga
DBGET
integrated database retrieval system
