KEGG   Apodemus sylvaticus (European woodmouse): 127696707
Entry
127696707         CDS       T10613                                 
Symbol
Sf3a1
Name
(RefSeq) splicing factor 3A subunit 1
  KO
K12825  splicing factor 3A subunit 1
Organism
asyl  Apodemus sylvaticus (European woodmouse)
Pathway
asyl03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:asyl00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    127696707 (Sf3a1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:asyl03041]
    127696707 (Sf3a1)
Spliceosome [BR:asyl03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    127696707 (Sf3a1)
 Complex B
    127696707 (Sf3a1)
 Complex C
   U2 SnRNP specific factors
    127696707 (Sf3a1)
SSDB
Motif
Pfam: Surp PRP21_like_P ubiquitin Ubiquitin_2 Rad60-SLD
Other DBs
NCBI-GeneID: 127696707
NCBI-ProteinID: XP_052055635
LinkDB
Position
11:79269694..79291507
AA seq 791 aa
MQAGPVQAVPPPPPMATESKQPMEEEASSKEDSTPSKPVVGIIYPPPEVRNIVDKTASFV
ARNGPEFEARIRQNEINNPKFNFLNPNDPYHAYYRHKVSEFKEGKAQEPSAAIPKVMQQQ
QQAAQQQLPQKVQAQVIQETIVPKEPPPEFEFIADPPSISAFDLDVVKLTAQFVARNGRQ
FLTQLMQKEQRNYQFDFLRPQHSLFNYFTKLVEQYTKILIPPKGLFAKLKKEAENPREVL
DQVCYRVEWAKFQERERKKEEEEKEKERVAYAQIDWHDFVVVETVDFQPNEQGNFPPPTT
PEELGARILIQERYEKFGESEEVEMEVESDEEDQEKAEETPSQLDQDTQVQDMDEGSDDE
EEGQKVPPPPETPMPPPLPPTPDQVIVRKDYDPKASKPLPPAPAPDEYLVSPITGEKIPA
SKMQEHMRIGLLDPRWLEQRDRSIREKQSDDEVYAPGLDIESSLKQLAERRTDIFGVEET
AIGKKIGEEEIQKPEEKVTWDGHSGSMARTQQAAQANITLQEQIEAIHKAKGLVPEDDTK
EKIGPSKPNEIPQQPPPPSSATNIPSSAPPITSVPRPPAMPPPVRTTVVSAVPVMPRPPM
ASVVRLPPGSVIAPMPPIIHAPRINVVPMPPAAPPIMAPRPPPMIVPTAFVPAPPVAPVP
APAPMPPVHPPPPMEDEPPSKKLKTEDSLMPEEEFLRRNKGPVSIKVQVPNMQDKTEWKL
NGQGLVFTLPLTDQVSVIKVKIHEATGMPAGKQKLQYEGIFIKDSNSLAYYNMASGAVIH
LALKERGGRKK
NT seq 2376 nt   +upstreamnt  +downstreamnt
atgcaggccggacccgtgcaggcggtacccccgccgccgccaatggccactgagtccaaa
cagccaatggaagaagaagcatcatcaaaggaggattccaccccatccaagccagtggta
gggattatttatcctcctccagaggtcaggaatatcgtcgacaagactgccagttttgtg
gccagaaatggacctgaatttgaagctaggattcgacagaatgagatcaacaaccccaag
ttcaatttcttaaaccccaatgacccttaccatgcctactaccgccacaaggtcagcgag
ttcaaggaggggaaggcgcaggagccctccgccgccatccccaaggttatgcagcaacag
cagcaagccgcacagcagcagctgccccagaaggtccaagcccaggtgatccaagagacc
atagtaccaaaggaaccccctccagagtttgagttcatcgctgatcccccatccatctca
gccttcgacctggacgtagtgaagctgacagctcagtttgtggccaggaatgggcgccag
tttctgacccagctgatgcagaaagagcagcgcaactaccagtttgactttctccgaccc
cagcacagcctcttcaactacttcacaaagctggtggaacagtataccaagatcttgatt
ccacccaaaggtttatttgcaaaactcaagaaagaggctgaaaatccccgagaagttttg
gaccaggtttgttaccgagtagaatgggccaaatttcaggaacgtgagaggaagaaggaa
gaagaggagaaagagaaggagcgagtagcctatgctcagattgactggcatgattttgtg
gtggtggagacagtggatttccaacccaatgagcaaggaaactttccacccccaacaaca
ccagaggaactgggagctcggatcctcattcaggagcgctacgagaaatttggggaaagc
gaggaagtggagatggaggttgagtcagatgaagaagatcaggaaaaggctgaggagact
ccttcccagctggaccaggacactcaagtacaggacatggatgagggttcagacgatgaa
gaagaaggacagaaagtgcctccacccccagagacacccatgcctccacctctgccccca
acaccagaccaagtcattgtgcgaaaggactatgaccctaaagcttccaagccccttcct
ccagctcctgctcctgatgagtatcttgtatcccccatcactggggagaagattcctgcc
agcaaaatgcaagaacacatgcgcattgggcttcttgacccccgctggctggagcagcgg
gatcgctccatccgagagaagcagagtgatgatgaggtttatgcaccaggtctggatatt
gagagcagcttaaagcagttggctgagcgacgtactgacatctttggggtagaagagacg
gccattggtaagaagattggtgaagaggagatccagaagccagaggaaaaggtgacttgg
gatggccattcaggcagcatggcccggacccagcaggctgcacaggccaacatcaccctc
caggagcagattgaggccatccacaaggccaagggcctagtgccagaagatgacactaag
gagaagattggccctagcaagcccaatgaaatccctcagcagccaccgcctccatcttca
gccaccaatatccccagctcagcaccccccatcacatcagtgccccggccacctgcgatg
ccacctccagtccgcaccactgttgtatctgcagtacctgtcatgcctcggccacccatg
gcatctgtggtccggctgcccccaggttcagtgatcgcccctatgccacccatcatccac
gcacccaggatcaacgtggtacctatgcctcctgcagcacctcctattatggcaccccgc
ccacctcccatgattgtgccaacagcctttgtgcctgccccacctgtggctccagtccca
gccccagctccaatgcctcctgtacaccccccaccgcctatggaagatgaacctccatcc
aagaaactgaagaccgaggacagcctcatgcctgaggaagagttcctgcgcaggaacaag
ggtccagtatccatcaaagtgcaggtacccaacatgcaggataagacggaatggaagctg
aatggtcaggggctggtcttcactctcccactcacagaccaggtctctgtcatcaaagtg
aagattcatgaagccacaggcatgcctgcagggaaacagaaactacagtatgaaggcatc
ttcatcaaggattccaactccctggcttactacaacatggccagtggtgctgtcatccac
ttggccctcaaggagagaggcggcaggaagaagtag

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