Apodemus sylvaticus (European woodmouse): 127696787
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Entry
127696787 CDS
T10613
Symbol
Pkd1l1
Name
(RefSeq) polycystic kidney disease protein 1-like 1
KO
K04987
polycystin 1L1
Organism
asyl Apodemus sylvaticus (European woodmouse)
Brite
KEGG Orthology (KO) [BR:
asyl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
asyl03037
]
127696787 (Pkd1l1)
04040 Ion channels [BR:
asyl04040
]
127696787 (Pkd1l1)
Cilium and associated proteins [BR:
asyl03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
127696787 (Pkd1l1)
Ion channels [BR:
asyl04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
127696787 (Pkd1l1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
REJ
PKD
Polycystin_dom
PLAT
PKD_4
GPS
PKD_channel
Motif
Other DBs
NCBI-GeneID:
127696787
NCBI-ProteinID:
XP_052055676
LinkDB
All DBs
Position
11
Genome browser
AA seq
2681 aa
AA seq
DB search
MRNNTKEPRVLPTESAEQRSFWKDQPAHHKVEVKAQDISKDQKRGSQLVCSVSSSAETPT
GAREKECLRLCSCSLSAFCSGVLAALKSQPLALGDKAGPSQSCSKRHADLQGVSSAAAPC
SLKKEVFCCDGQGLLCSEEDLAKMLFLSFSDPPGISHTCNLSASWYHPESSSPLTQHPPG
AILVTWPENARHSAICCFPETDAQTPPALGIRVHVASGTALCLLLDFGDNCGAEMRLCPV
TGAATVTGYHQYSKEGVYELKAVVHDFHGAKELGPYYVDIGHGNVSAFMNSSSIHDSEAL
SFADSLPEQKGTVVMHWFSSVPSYNVSFVSQTQVDSSQAWHGVTVGYKMQSVSVYTNGTV
FAADTNITFVAVTQETLPLEFAWYFGKKPPVMTTSRSIRRRLSIPQWYHVKVKATSRMGS
VVSEPHLIRVQKRIVANRLVSTASALVNANVSFECRLNFGTDVAYLWNFGDGTIELGSSS
SSHIYSREGEFTVEVLAFNNISSATLRKQLFLVQEPCQPPPVKTMGPAKVQIWRSQPLRL
GVTFEAAILCNISQGLTYTWSFVGAEATAVTLPAAVDTHRQIIMLPSYTLECGNYTAIAK
VQIKGTVVYSNYCVGVEVRARAPVSVISEGTHILISKATSTSIILRGSQSYDPDNPGAAL
RYHWTCTSASSPQWPCFDDSTPYRVDTQAPAISFPAKWLSECCDQFLVTLTVSSRGQNSS
QALMFLTTRPDLAFRFVHISWVSFRDISVNWNEEVSLQAVCEDCGDVPDLTYSWDLFLVN
ATQKSTMEVPFCSAVGLLGASALRASLKSPGSDLPSNLRASLTPHSLEPSPMPLGWTSLA
NLGSISAESTAGGHHVPAAGPVAGSGEPVEEYGSLSPAPSSPAEEALVMSNPEGSWPSPS
SSTDFDDFEAYYSDIQEAVPSLGRQPGTSTNFQVAGPSLSAEESASYGDNLLGPFLHTGT
AKPTLMIDWPKALVSQDVFHGYTTSGIMGPVMTIKPFSLSSGETYVLQASVASKHVLLGK
AQLYLTVNQAPQDMSCQVRPHHGMEAYTIFSVFCMSGKPDFHYEFRYQIGNTSSHTLYHG
QDTQYYFLLPAGDSSDNYKVIVSIEITDGQGSKVQPCTVAVTVLPRYHRNGCQDKDLYNS
TLANLSTLQLVGSYMEIRNYITMITGILSRLYMESSNTSSCDQWSQVQDELISSACKIPY
TDQEAMMDSIHILRDLISFPNKLSLTSAMCIFKYAQMFLAQGQCSRWLLVNKKLRVEFVL
LISGVWEAAKEDSKDGEYLQEEGMKIISDMLLACLSDKHQVHISTGQMEFQTLLHHSPQS
SMQNLGFVQVHFPSDLALYSTTQEATHSPCYISQLMFFMKSPYPRGQAPGKVGGVMIPRL
YSCESRRPILRGRLETPVTMEFGEEDHLHKRNPAMFVLLRDEVNVHRFTGLSENSQESLQ
IHIEFSKPVTRAFPITLLVRFSEKATPSDFLVKHVYFWDEQTVQLYVPAAPRKGANVGYL
SLLDADYDRKPPNKYLAGAVNYTVHFQWIQCVFWDKTEWRSEGSYPQPGTSPEKVSCSYR
HLAPVSVLRRKLNGTFEVSSISEFQSHPHNLLPCAFSVFFLALYGFLVSKSRRVDRHEKQ
NPGCIFLEEDTPPGHQLYAVIIDTGFRSPARFTSKVFIVLYGESGCSETKELCCPEKPLF
GRNSRHTFILSTPNQLGPLQKICLWHDSSGPSPCWFISHVMVKELCSGKAWFFSAQCWLA
VSKWGGRVLREFFCLNHGLSFWKLFCAKFTEYLEDFHIWLSLYSHPPSSGYPHTQRLAVS
FCLLCVYSCLTALVTAGGQEQRRLDVGPTALTLDSFSLALLCTLLACPAAQLLSLLFRCS
KEARGNLRASPPWPLRGVKTEAPQGPDPSGRPDSRQPSPHPTSDLLPGTDTAWRTGAGCR
GVVCLPFPLEACRDTHLALREKGHYSLPRSQAPSSAFEELGPQQSRVCLLWSSSVAWVIS
GSASLACSMGTGYLGYRFVPAQCMWWLHLLLLSLVCCAFITQPLMICLAALAFAWKWKHD
SEFFAESLRAATKGLDLEVEEHSRTRIPLSPLSHSPDSAEEAERVLAARQRERHLRWTQM
PSRAKFRVTRERLKRESLMRAALSDMTTHSIMLLLLLFIAYGRVCPGESSLNHAIRKAFT
RSANHSLGDVGSTEDWWDWTLSTLLEGLYPERTSARAWGAQPGALGGQCHLIGPAVIKQL
KVSAGTACTPPRPFPEPRVEDALPMHSRHLDPENRNVTPGGPETCGVKKESSTRSLGRTR
REAHAALTALRASRWIDHSTRVVVVHVTLYNPPTRLFTSVTLGAECLPTGGLVPSFLVES
FSIFYSDSSLKYLLMLSELLFLVLNMIHLCFQLWGIATKGFLSYWRKPRHWLELSTVGVA
LAYHAASGHLTTLAENITDQFHKGLYQRFVDVSLMVSWSQRARCLQGILLFLWMLKCVHL
LSSLSTMTPFSAVTCFPPFRVLVPLLVGALLLAAHSHLQWFLLFNGTLSRGTPAEAFPGL
LLQFLGRSQKDSWHSRLESDHGAVHCHYGTLFLLLAALGFGMLRATFLTVFQNRKSFHRK
SLVTLKDIAAYTWHKVLTLLGLETTPLGETEVALDHIYYLDEFSSLLDELLMKIDGLSDS
LELSILEKQALESRAGDSPSVGISEDQATGKNVVVLDESAL
NT seq
8046 nt
NT seq
+upstream
nt +downstream
nt
atgagaaataacacaaaggagcccagggtgctccccactgagtctgcggaacagagaagc
ttctggaaggaccagccagcacatcacaaggttgaggtaaaggcccaggacatttctaag
gaccagaaaaggggttcccagctggtttgctctgtttcctcaagtgccgagaccccaaca
ggggcccgcgagaaggagtgtcttcgactttgtagctgcagcctcagcgccttctgcagt
ggagtgctagctgcactcaagtctcagcctctcgccctaggagacaaagctggaccaagt
cagagctgcagtaaaaggcacgctgatttgcagggtgtctcctcggcggcagccccctgc
agcctgaagaaggaagttttctgctgtgatggacaaggactgctgtgctcggaggaggac
ttggccaagatgctgtttctgagcttctcagaccctcctggcatttctcacacctgcaac
ctctctgcatcctggtaccatcctgagagttccagtcctctcactcagcatcctcctggg
gccatcttggtgacatggcctgaaaatgctaggcactctgccatctgctgcttcccagaa
acagatgctcagacacctccagccctgggaattcgtgttcacgtggcttccggaacagct
ctttgtctgctgctggactttggggacaattgtggagctgagatgagactgtgtccagtg
acaggtgcagctactgtgactggctaccaccagtacagcaaagaaggagtctatgagctc
aaggctgttgtccatgactttcatggagctaaggagctgggaccctattatgtggacatt
ggccatgggaatgtgtctgcattcatgaattccagctctatccatgacagcgaagcgctt
tcctttgctgactccctcccagagcagaaaggcacagttgtgatgcattggttttcatcc
gttccttcatacaatgtgtcctttgtttctcagacccaagtggacagcagccaggcttgg
catggtgtgaccgttgggtataagatgcaatctgtgtctgtctacaccaatggaactgtg
tttgctgcagacacaaacatcacatttgtggctgttactcaggaaactctgcccttggag
tttgcatggtattttggaaaaaaaccaccagtgatgacaacgtccagaagcattagaaga
aggctgagcatccctcagtggtaccatgtgaaggtcaaggccaccagcaggatgggcagt
gtggtctctgagccccacctcatcagggtgcagaagagaatcgtggccaaccggctcgtg
tccactgcctcagccctggtcaatgccaacgtgtcctttgagtgtaggctcaactttggc
accgatgtggcctacctttggaactttggagatggcaccattgagttgggcagcagctcc
tccagtcacatctacagcagggagggagagtttacagttgaagtccttgccttcaataac
atcagctccgccaccctaagaaagcagcttttcctcgtgcaggagccttgccaaccaccc
ccagtgaagaccatggggcctgcgaaggttcagatatggaggtctcagcccctgaggcta
ggagtgacctttgaagccgccatcctctgtaacatttcccaagggcttacctacacctgg
agctttgtgggtgctgaggcaaccgctgtcaccctccctgctgctgtcgacacccacaga
cagatcatcatgctcccgagctacacactggagtgtgggaactacactgccatcgccaag
gttcagatcaagggaaccgtggtatatagcaactattgtgttggtgtagaagttcgagct
agagcacctgtcagcgtcatctctgaaggcacacacattctcatctccaaggccacctca
acctccatcatcctcagagggtcccagtcctatgaccctgacaacccaggggctgctctc
aggtatcactggacttgcacctcggccagctcaccacagtggccctgctttgacgactct
accccataccgagtggacactcaagctcctgccatttccttcccagcaaaatggctcagt
gagtgctgtgaccagttccttgtcacactgacagtctccagcagggggcagaactcatcg
caggccttgatgttcctgaccacccggcctgacctggccttcagatttgtccacatctcg
tgggtcagctttagagacatctctgtgaactggaatgaagaagtatctctccaagctgtg
tgtgaagactgtggagatgtcccagacctcacttattcctgggatctcttcctagtcaat
gcaacccagaagagtacaatggaagtccccttctgcagtgctgtggggctgctgggtgcc
tcagcacttagggccagtctgaagtcacctgggtctgacctgccatcaaatctgagagca
tcactgacaccacattcgttggagccttcacccatgcccctgggctggacatctcttgcc
aacctgggaagcatttctgctgagtccacagccggtgggcaccacgttcctgccgcagga
cctgtggcaggctcaggagagcctgtggaggagtatggctcactgagcccagcaccaagc
tccccggctgaggaagccctggtgatgagcaaccctgagggaagctggccctcccccagc
tcttccactgactttgatgattttgaagcctactatagtgacatccaagaagccgtgcca
tccctaggaagacaaccagggaccagcacaaactttcaggtagcaggaccaagcctgagt
gctgaggagagtgccagctatggggacaacctgctgggccctttcctccacacgggcaca
gcaaagccaactctcatgatcgactggcccaaggccctggtcagccaagatgtcttccat
ggctacaccacatcaggtatcatgggaccagttatgacaataaagccattttcactgagc
agtggcgagacatatgtcttacaagcttctgtagcttcaaagcatgtcttactgggcaag
gctcagctctacttaacggtcaaccaagctccacaggacatgtcttgtcaggtgcgacct
caccatggtatggaggcatataccatcttcagtgtcttctgcatgtcagggaaaccggac
tttcattacgaatttcgttaccagataggaaacacttcctcacataccctgtaccatgga
caggacacccagtattattttttattgccagctggtgattcctcagacaattacaaagtc
attgtttcaattgagatcacagatggccaaggctccaaggtgcagccatgcactgtggcg
gtgactgtgctaccccgttaccatagaaacggctgccaggacaaggacctatataactcc
accctggcaaacctgtctactctccagctggtgggaagttacatggaaatcaggaactac
attaccatgatcactgggatcctgagccgcttgtatatggagagcagcaacacttcttca
tgtgatcaatggtcacaagtacaggatgaattaatttcttcagcatgcaaaataccttat
acagaccaggaagctatgatggattctattcatatattgagagacctcataagcttccct
aataagttgagcttgacgagtgccatgtgcatcttcaaatacgcccagatgttccttgct
caaggtcagtgctccaggtggttgctggtcaacaaaaaactaagagttgaatttgtcctt
ctcatttctggagtctgggaagctgccaaagaggattcgaaggatggggagtatctgcaa
gaagaaggcatgaagatcatctctgacatgttactagcctgtctctcagacaagcatcag
gttcacataagcacggggcagatggagttccagacccttctccaccacagcccccagagc
tctatgcagaacctaggcttcgtccaggtacatttccccagcgacctggccttgtacagt
actactcaagaggcaacacacagcccatgctacatcagccagctcatgttcttcatgaag
agtccatatccaaggggacaagctcctgggaaggtgggtggtgtcatgatccccaggctc
tatagctgcgagagcagaagacctatcctcagaggacgactggagacacctgtgactatg
gagtttggggaagaagaccacctgcacaagagaaatccagccatgtttgtgttgcttcgg
gatgaggtgaatgtccatcggttcacagggctttcagaaaactcccaggaatctttacag
atacacatcgaattctctaagcccgttacaagagcctttcccatcacactgttagtaagg
ttctctgagaaagccacgccttctgattttcttgtgaagcacgtctacttctgggacgag
cagactgtgcaattgtatgtacctgctgctccacggaaaggagccaatgtgggatattta
tccctactagatgctgactatgacaggaaacctccaaacaaatatcttgctggggctgta
aactatacagtgcatttccagtggatccaatgtgtgttttgggacaagacggagtggcga
tctgaaggttcctatccacagccaggaacttctcctgaaaaagtcagctgcagctaccgg
caccttgcacctgtctccgtcctcagaagaaagctgaatggcacttttgaagtgagcagc
atttctgagtttcagagtcatccgcacaacttgctcccctgtgctttcagtgtctttttc
ttggctctttatggatttttggtgagtaaaagcaggcgtgtagatcgtcatgagaaacag
aatcctggttgtatttttctggaagaagacacaccacctggtcatcagctgtatgcagtc
atcatcgacactggcttccggtcaccggccagatttacctcaaaggttttcattgttcta
tatggtgaaagtggatgctcagaaaccaaagaactctgctgtccagagaagcccttgttt
ggaaggaattccaggcacaccttcatcctgagcacgcccaaccaactgggaccgctccaa
aagatctgcctctggcacgacagtagtggaccttccccatgctggttcatcagccacgtg
atggtgaaggagctatgctcagggaaagcctggttcttctctgctcagtgctggttggct
gtgagcaaatggggtggccgtgtgttacgagaattcttctgcctgaaccatggcctcagt
ttctggaagcttttctgtgcaaagttcacggagtacctggaagacttccacatctggctc
tcactgtacagtcatcccccatccagcggttacccccacacacagcggcttgctgtgtcc
ttctgcctgctgtgtgtctactcctgcctcactgccctggtcactgcgggaggccaggaa
cagcgccgcctggatgtgggtcccacggctctcactctggactccttcagtctggccctg
ctgtgcaccctcctggcctgtccagccgcacagctcctgtcactgctcttcaggtgcagc
aaggaagccagagggaatctacgggcttcaccaccatggcctctcagaggagtgaagaca
gaggcgcctcagggccctgatcccagtgggagaccagattcgagacagccctccccacat
cccacatcagaccttcttcctgggactgacacagcttggaggacaggagccggctgcaga
ggtgtggtctgtttaccgtttccactggaggcctgcagggatacacatcttgctctgaga
gagaagggccactactctcttccccgttcacaagctcccagcagtgcttttgaagaactt
gggccccagcagtcaagggtctgtctgctctggtcaagctctgtggcctgggtcatctct
gggtcagcttccctggcctgtagtatggggacaggatacctaggctacaggtttgtgccg
gcacagtgtatgtggtggctgcacctgctgcttctctctctggtctgctgtgcattcatc
actcagccgctcatgatctgcttggcagcactggcctttgcctggaaatggaaacatgac
agcgagttttttgccgaatctttgcgagctgcgaccaagggtctggatttggaagtggaa
gaacattccagaactcgcattcctctttctcctctctcccatagtcctgacagtgctgag
gaggctgaaagggtcttggctgcccggcaacgagaacgccacctgcgctggactcagatg
ccatccagggccaagttcagagtgaccagggagagactgaagagagaaagcctcatgcgg
gcagccctgagtgacatgaccacgcacagcatcatgttactgctgcttttgtttattgca
tatgggagagtctgcccaggtgaatcttctctcaatcatgccatcaggaaagcatttaca
agaagtgccaatcactccttgggggacgtcggcagcacagaagactggtgggactggaca
ctgagcacactgctagaggggctgtacccagaaagaacgtctgctagagcctggggggca
cagcctggagctctcggagggcagtgccacctgataggccccgccgtgatcaagcagctg
aaggtgtctgctggcactgcgtgcacgcctcccaggcccttcccagagcccagagtggaa
gatgcactccctatgcatagtcgtcaccttgatcctgagaaccgaaatgtgacccctggt
ggtcctgagacctgtggcgtgaagaaagagagctccactcgcagcctaggaagaactagg
cgtgaagcccacgcagctctgacggccctcagggccagcaggtggatcgaccacagcacg
agggtcgtggttgtgcatgtcactctctacaaccctccgacacgactcttcacaagcgtg
accctgggtgcagaatgtctccccacaggaggtcttgtcccttcattcctggtagagtcc
ttcagcatcttctacagtgactcatccctaaagtaccttcttatgctttctgagctgctg
ttcctggtactcaacatgatccacctctgtttccagctctggggaatagcaaccaagggc
ttcctcagctactggagaaaaccaagacactggctggagctctctacggttggagtggca
ctggcctaccatgcagcctctggtcacctcactactcttgctgagaacatcactgaccag
ttccacaaaggactttatcagaggtttgtggacgtcagcctgatggtgtcatggagtcag
agggcacgatgcctccagggaatcctcctgttcctctggatgttgaaatgtgttcatctc
ctcagctctctgagcaccatgacacccttctcagcagtgacctgtttccctcccttcaga
gtcttggtgccattgctggtgggggccctattgctggccgcccactcccacttgcagtgg
tttctgctcttcaatgggaccctgtcacgtggcacccctgcagaggcatttcctgggcta
ttgcttcaatttctgggaagaagtcaaaaagattcatggcacagtcgtttggagtctgac
cacggagctgtgcattgtcactacgggaccctctttctgttgctggctgctctgggtttc
ggaatgttgagagctactttcctgactgttttccaaaacagaaagtcttttcacagaaaa
tctctcgtgacacttaaagacatcgctgcttacacgtggcataaagtcctcacccttctg
gggctggaaacaacacctttgggagagactgaggtggctctggaccacatttattacctg
gatgaattttcaagtctattggatgaacttctgatgaagatagatggtttgtctgacagc
ctagaactttctatcctagaaaaacaagcattggagtcaagggcaggggacagtccttca
gttggcatttcagaggaccaagctactgggaagaacgtggttgtgctggatgagagcgca
ctgtga
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integrated database retrieval system
