Apodemus sylvaticus (European woodmouse): 127696827
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Entry
127696827 CDS
T10613
Symbol
Thoc5
Name
(RefSeq) THO complex subunit 5 homolog isoform X1
KO
K13174
THO complex subunit 5
Organism
asyl Apodemus sylvaticus (European woodmouse)
Pathway
asyl03013
Nucleocytoplasmic transport
asyl03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
asyl00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
127696827 (Thoc5)
09122 Translation
03013 Nucleocytoplasmic transport
127696827 (Thoc5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
asyl03019
]
127696827 (Thoc5)
03041 Spliceosome [BR:
asyl03041
]
127696827 (Thoc5)
Messenger RNA biogenesis [BR:
asyl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
127696827 (Thoc5)
Spliceosome [BR:
asyl03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
127696827 (Thoc5)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FmiP_Thoc5
Motif
Other DBs
NCBI-GeneID:
127696827
NCBI-ProteinID:
XP_052055697
LinkDB
All DBs
Position
11
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AA seq
695 aa
AA seq
DB search
MSSESSKKRKPKVIRSDGAPTEGKRNRSDTEQEGKYYSEEAEVDLRDPGRDYELYKYTCQ
ELQRLMAEIQDLKSKGSKDVAIEIEERRIQSCVHFMTLKKLNRLAHIRLKKGRDQTHEAK
QKVDAYHLQLQNLLYEVMHLQKEITKCLEFKSKHEEIDLVSLEEFYSEAPPNISKAEITM
GDPHQQTLARLDWELEQRKRLAEKYRECLSNKEKILKEIEVKKEYLSSLQPRLNSIMQAS
LPVQEYLFMPFDQAHKQYETARHLPPPLYVLFVQATAYGQACAHMKSSSQPPRQDKTLSV
AIEGSVDEAKALFKPPEDSQDDESDSDAEEEQTTKRRRPTLGVQLDDKRKEMLKRHPLSV
LLDLKCKDSSVLHLTFSYLMNLNIMTVKAKVTTAMELTTPISAGDLLSPDSILSCLYPGD
HGKKTPNPANQYQFDKVGILTLRDYVLELGHPYLWVQKLGGLHFPKEQPQHTVMADHSQS
ASHMETTMKLLKTRVQSRLALHKQFASLEHGIVPVTSDCQHLFPAKVVSRLVKWVIIAHE
DYMELHFTKDIVEAGLAADTNLYYLALIERGTAKLQAAVVLNPGYSSIPPVFRLCLNWKG
EKTNSNDDNIRAMESEVNVCYKELCGPRPSHQLLTNQLQRLCVLLDVYLETESHDDSVEG
PKEFPQEKMCLRLFRGPTRMKPFKYNHPQGFFSHR
NT seq
2088 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcagaatccagcaaaaaacggaaacccaaagtgatccgaagtgatggagctcca
actgaagggaaacggaaccgatctgacacggagcaggaaggcaaatattacagcgaggag
gcggaggttgacctgcgggaccctggcagggactatgagttgtacaagtacacttgccag
gagctgcaaaggctgatggccgagatccaggacctgaagagcaagggcagcaaggatgtg
gccattgaaattgaagaacgaaggatccagagctgtgtacatttcatgactctaaagaag
cttaatcgattagcccacatcaggttaaagaaagggagagatcaaacccatgaggccaag
cagaaagttgacgcctaccacctccagctgcagaacctgctctacgaagtgatgcacctg
cagaaggagatcaccaaatgtctggagttcaagtcaaagcacgaagaaattgatctggtc
agtttagaggaattttattcagaggctccaccaaacatcagcaaggccgagatcaccatg
ggagaccctcaccaacagacgttggcacgtttggactgggagctggagcagcggaaaagg
ctggcagagaagtaccgagaatgtctgtccaacaaggagaagatcctgaaggagattgag
gtgaagaaggagtatctgagcagcctccagcctcgcctcaacagcatcatgcaggcttcc
ctgccagtgcaagaatacctgttcatgccgtttgaccaggcacacaagcagtacgagact
gccaggcacctgccccctccgctctatgtgctgtttgtgcaggccaccgcgtacggccag
gcctgtgctcatatgaaatcctcctcccagccccctagacaggataagacgctgtctgtg
gcaattgaaggcagtgtggacgaagctaaagctcttttcaaaccccctgaggactcccaa
gatgatgagagcgactcagatgctgaagaggagcagaccacgaagcggcgtcggcccact
ctcggggttcagttggatgacaagcgcaaggagatgctgaaaaggcacccactgtctgtc
ctgctggatctgaagtgcaaagacagcagtgtgcttcatctgacattcagctatctcatg
aacctcaacatcatgacagtgaaagccaaagtgacgaccgccatggagctgaccaccccc
atcagtgcaggagacttactgtctcctgactccatcttgagctgcttgtatccgggagat
catgggaaaaaaactccaaatccagccaatcagtatcagtttgataaagttggcatcctg
actttgagagactatgtacttgagttaggtcacccctacttgtgggtacagaagctgggt
ggcctccacttccccaaagagcagccccagcacacagtgatggccgaccactcacagagc
gccagccacatggagaccaccatgaaactgctgaagaccagggtacagtcccgcctggct
ctccacaaacagttcgcatctctggaacacggcatcgtgccagtcaccagcgactgccag
cacctcttccctgccaaggttgtttctcgcttggtaaagtgggtgataattgcccatgaa
gattacatggagctgcacttcactaaggacatcgtagaagcaggactggctgcagacacc
aatctctactacctggcacttattgaaagggggacagctaaacttcaggctgctgtggta
ctgaaccctggctactcctccatcccacctgttttccgactctgtctaaactggaaaggg
gagaaaaccaacagcaacgatgacaatattcgggctatggagagtgaagtcaacgtgtgc
tataaggaactgtgtggccctcggcccagtcaccagctcctgaccaaccagctgcagagg
ctgtgtgtgctgctggatgtctacctggagaccgagagtcatgatgacagcgtagagggc
cccaaggagtttccccaggagaagatgtgcctgcggctttttaggggtccgactaggatg
aagccatttaaatataaccaccctcagggattcttcagccaccgctga
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