Apodemus sylvaticus (European woodmouse): 127696934
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Entry
127696934 CDS
T10613
Symbol
Rbbp6
Name
(RefSeq) E3 ubiquitin-protein ligase RBBP6 isoform X1
KO
K10624
E3 ubiquitin-protein ligase RBBP6 [EC:
2.3.2.27
]
Organism
asyl Apodemus sylvaticus (European woodmouse)
Brite
KEGG Orthology (KO) [BR:
asyl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
asyl04121
]
127696934 (Rbbp6)
Enzymes [BR:
asyl01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
127696934 (Rbbp6)
Ubiquitin system [BR:
asyl04121
]
Ubiquitin ligases (E3)
U-box type E3
127696934 (Rbbp6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DWNN
zf-CCHC_2
U-box
zf-C3HC4_2
zf-C3HC4_3
zf-CCHC
zf-RING_UBOX
zf-RING_2
zf-C3HC4
zf-RING_5
zf-C3HC4_4
Motif
Other DBs
NCBI-GeneID:
127696934
NCBI-ProteinID:
XP_052055767
LinkDB
All DBs
Position
1:complement(82847840..82879659)
Genome browser
AA seq
1789 aa
AA seq
DB search
MSCVHYKFSSKLNYDTVTFDGLHISLCDLKKQIMGREKLKAADSDLQITNAQTKEEYTDD
NALIPKNSSVIVRRIPIGGVKSTSKTYVISRTEPVMGTTKAIDDSSASISLAQLTKTANL
AEANASEEDKIKAMMSQSGHEYDPINYMKKTLVGPPPPSYTCFRCGKPGHYIKNCPTNGD
KNFESGPRIKKSTGIPRSFMMEVKDPNMKGAMLTNTGKYAIPTIDAEAYAIGKKEKPPFL
PEEPSSSSEEDDPIPDELLCLICKDIMTDAVVIPCCGNSYCDECIRTALLESDEHTCPTC
HQNDVSPDALIANKFLRQAVNNFKNETGYTKRLRKQLPPPPPPIPPPRPLIQRNLQPLMR
SPISRQQDPLMIPVTSSSAHPTPSISSLTSNPSSLAPSVPGNPSSAPAPVPDITATVSIS
VHSEKSDGPFRDSDNKLLPAAALTSEHSKGASSIAITALMEEKGYQVPVLGTPSLLGQSL
LHGQLIPTTGPVRINAARPGGGRPGWEHSNKLGYLVSPPQQIRRGERSCYRSINRGRHHS
ERSQRTQGPSLPATPVFVPVPPPPLYPPPPHTLPLPPGVPPPQFSPQFPPGQPPPAGYSV
PPPGFPPAPANISTPWVSSGVQTAHSNTIPTTQAPPLSREEFYREQRRLKEEEKKKSKLD
EFTNDFAKELMEYKKIQKERRRSFSRSKSPYSGSSYSRSSYTYSKSRSGSTRSRSYSRSF
SRSHSRSYSRSPPYPRRGRGKSRNYRSRSRSHGYHRSRSRSPPYRRYHSRSRSPQAFRGQ
SPTKRNVPQGETEREYFNRYREVPPPYDIKAYYGRSVDFRDPFEKERYREWERKYREWYE
KYYKGYAVGAQPRPSANREDFSPERLLPLNIRNSPFTRGRREDYAAGQSHRNRNLGGNYP
EKLSTRDSHNPKDNPKSKEKESESVPGDGRGNKHKKHRKRRKGEETESFLNPELLETSRK
SRESSGIDETKTDALFVLPSRDDATPVRDEPMDAESITFKSVSEKDKREKDKPKVKSDKT
KRKSDGSATAKKDNVLKPSKGPQEKVDGDREKSPRSEPPLKKAKEEATKIDSVKPSSSQK
DEKVTGTPRKAHSKSAKEHQEAKPVKEEKVKKDCSKDIKSEKLTSKEEKAKKPEKNKLLD
NKGEKRKRKTEEKSVDKDFESSSMKISKVEGTEIVKPSPKRKMEGDVEKLERTPEKDKIA
SSTTPAKKIKLNRETGKKIGNAENTSTTKEPSEKLESTSSKIKQEKVKGKAKRKVAGTEG
SSSTLVDYTSTSSTGGSPVRKSEEKTDTKRTVIKTMEEYNNDNTAPAEDVIIMIQVPQSK
WDKDDFESEEEDVKSLQPIQSVGKPSSIIKNVTSKPSATVKYTEKESEQSEKIQKLPKEV
SLEMMQPELRSSKGSASSEKGRAKDREHSGSEKDNPDRRKSSAQPDKESTVDRLSEQGHL
KNLSQSSKETRTSEKHESVRGSSNKDFTPGRDKKVDYDSRDYSSSKRRDERSELARRKDS
PPRSKESLSGQKSKLREERDLPKKGTESKKSNSSPPRDKKPHDHKASYEMKRPCEETKLV
DKNSGKEREKHAADARNGKEASGSKVPFIPNVAEPPIEKEPAAGQTEKSASKPKPQVSHS
SRLSSDLTRETDEAAFEPDYNESDSESNVSVKEEETVASISKDLKEKTTEKAKESENVAT
ASQPVADRSQSQSSPSVSPSRSHSPSGSQTRSHSSSASSAGSQDSKKKKKKKDKKKHKKH
KKHKKHKKHAAADGDVEKSQKHKHKKKKAKKNKDKEKEKDDQKVKSVTV
NT seq
5370 nt
NT seq
+upstream
nt +downstream
nt
atgtcctgtgtgcactataaattttcctctaaactcaactacgacaccgtcacctttgat
gggcttcatatctccctctgcgacttaaagaagcagattatggggagagaaaagctgaaa
gctgccgatagcgatctgcagatcaccaacgcgcagacgaaagaagaatatactgatgat
aatgcgctcattcctaaaaattcatctgtgattgtcagaagaattcctattggaggtgtt
aagtctacaagcaagacatatgttataagtcgaactgaaccagtgatgggaactacaaaa
gcaattgatgactcttctgcatctatttctctggcccagcttacaaagactgccaatctg
gctgaagccaatgcttctgaggaagacaaaattaaagcaatgatgtcgcaatctggccat
gaatacgacccaatcaattacatgaagaaaactctagtaggtccaccacctccatcttac
acctgctttcgttgtggtaaacctggtcattatattaagaattgcccaacaaatggggat
aagaactttgaatctggtcctaggatcaaaaagagcactggaattcctagaagttttatg
atggaagtgaaagatcctaacatgaaaggtgcaatgcttacgaacactggaaaatatgcc
ataccgactatagatgcagaggcctatgcaattgggaagaaagagaaaccacccttctta
ccggaggaaccatcatcatcttcagaagaagatgatcctatcccagacgagctcttgtgc
ctcatctgcaaggacattatgactgatgccgttgtcattccctgctgtggaaacagttac
tgtgatgaatgtataagaacagcacttctggaatcagatgagcatacatgtccaacttgt
catcaaaatgatgtttctcctgatgctttaattgccaacaagttcttacgacaggctgtt
aataactttaaaaatgaaactggctatacaaaaagactacgaaaacaattacctccaccc
ccacccccaataccaccgccaagaccactcattcagcggaacctacagcctctgatgagg
tctcccatatcaagacagcaggatcctctgatgattccagtgacatcttcctcagctcac
ccaactccctctatatcttcattaacttcaaatccatcttccttggctccttctgtgcct
ggaaatccatcttctgccccagctccagtacctgatataactgcaacagtatctatatca
gtccattcagaaaaatcagatggaccctttcgggattctgataataaattattaccagct
gccgcccttacatcagaacattcaaaaggagcctcttcaattgctattactgctcttatg
gaagaaaagggttaccaggtgccagtccttggaactccatctttgctgggacagtcatta
ttacatggacagctgatccccacaactggtccagtaagaataaacgctgctcgtccaggc
ggtggtcgaccaggttgggaacattccaacaagcttgggtacctagtttctccaccacag
caaattagaagaggagaaagaagctgttacagaagtataaaccgcgggcgacaccacagc
gaacgatcacagaggactcaaggcccgtcactaccagcaactccagtctttgtgcctgtt
ccaccacctcctttgtatccgcctcctccccatacacttcctcttcctccaggtgtacct
cccccacagttttctcctcagtttcctcctggccagcctccaccagcaggatatagtgtc
cctcctccagggtttccaccagctcctgccaatatatcaacaccttgggtatcgtcagga
gtgcagactgcccattcaaataccatccctacaacacaagcacctcctttgtccagggaa
gaattctatagagaacaacgacgactaaaggaagaggaaaagaaaaagtccaagctagat
gagtttacaaatgattttgctaaggaattgatggaatacaaaaagattcaaaaggagcgt
aggcgctcattttccaggtctaaatctccctatagtgggtcatcgtattcaagaagttca
tacacttactcaaagtcaaggtctggctcaacacggtctcgctcttactctcggtccttc
agccgctcccactctcgatcttattcacgatcacccccataccccaggagaggcagaggc
aagagccgcaactaccgctcacggtccagatctcatggataccaccgatctaggtcaagg
tcacctccctatagacgataccactcacggtccagatcccctcaagcatttaggggacag
tctcccactaaacgtaatgtacctcaaggagagacagagcgtgagtattttaatagatac
agagaagttccacccccttatgacatcaaagcctattatgggcggagtgtcgactttaga
gacccatttgagaaagaacgctaccgggaatgggagaggaaataccgagagtggtatgag
aagtactacaaagggtacgcagtgggagcgcagcctagaccctcggccaacagagaggac
ttctctccagagagactcttacctcttaatatcaggaattcgcccttcacaagagggcgc
agagaggactatgctgctggacaaagtcatagaaatagaaatctaggtggcaactatcca
gagaagctttcaacaagagacagtcacaatccaaaagataatccaaaatcaaaagagaag
gagagtgagagtgttccaggagatggcagagggaacaagcataagaaacacaggaaacga
agaaagggggaggagactgagagcttcctgaacccagagctactggagacctccaggaaa
tccagggaatcatcagggattgatgagactaagacagacgcactgtttgttctcccaagc
agggatgatgctacacctgttagggatgaaccaatggatgcagaatctatcactttcaag
tcggtatctgaaaaagacaagagagaaaaggataagccaaaagtcaaaagtgacaagacc
aaacggaaaagtgatgggtctgctacagccaagaaagacaatgttttaaagccttctaaa
ggaccccaagaaaaggtagatggagaccgtgaaaaatctcctcgatctgaacctccactc
aaaaaagccaaagaggaggctacaaagatcgactctgtaaaaccttcctcatctcagaag
gatgagaaggtcactggaacccctagaaaagcccactctaaatctgcaaaagaacaccag
gaggcaaagccagtcaaggaagagaaggttaaaaaagactgttccaaagacatcaaatca
gaaaagctaaccagtaaggaggagaaggctaagaaacccgagaaaaataaactacttgat
aacaagggagagaaacgaaagagaaaaactgaagaaaagagtgtagataaagattttgag
tcatcgtcaatgaaaatctctaaagtagaaggaacagaaatagtgaaaccatcaccaaag
cggaaaatggaaggtgatgttgaaaagctggaaaggaccccagaaaaggataagattgca
tcatcaactaccccagccaaaaaaatcaagctcaatagagaaactggaaaaaaaattgga
aatgcagaaaacacatctactacaaaagaaccctctgaaaaattggagtcaacatctagc
aaaatcaaacaggaaaaagtcaagggaaaggccaaacggaaggtagctgggactgaaggc
tccagctccacacttgtggattacaccagtacaagctcaactggaggcagtcctgtgagg
aaatctgaagaaaagacagatacaaagcggacagtcattaaaactatggaggaatataac
aatgataacacagctcctgctgaagatgttataattatgattcaggttcctcagtccaaa
tgggataaagatgactttgaatctgaagaagaagatgttaaaagcttacaacctatacag
agtgtagggaagccatcgagtattataaaaaatgttacttctaagccatcagctacagtt
aagtacactgagaaagaaagcgagcagtctgagaaaattcagaagcttcccaaggaggtg
agccttgagatgatgcagccagagcttaggagctcaaagggctccgcgtccagtgagaag
gggagggccaaggatcgggagcactcggggtcggagaaggacaaccctgacaggaggaag
agcagtgcccagcctgacaaggagagcactgtggaccgcctgagtgaacaaggacatctg
aagaatctctctcagtcttccaaagagaccaggacttcagagaagcatgagtctgttcgt
ggttcttcaaataaagacttcactcctggtagagacaaaaaagtggactatgacagcaga
gattattccagttccaaacgaagagatgagagaagtgaattagcaagaagaaaagactct
cctcctcggagtaaagagtctttatctggacagaaaagtaagctgagggaggagagagat
ttacctaaaaagggaaccgagtcaaaaaaaagtaattctagccccccaagagacaaaaag
cctcatgatcataaagcctcctacgaaatgaaacgcccatgtgaagagacaaagttggta
gataaaaactctgggaaggaacgggagaagcatgctgctgacgctcggaacgggaaagag
gccagtggcagcaaagtgccattcatccctaacgtagcagagcctcccatcgagaaggag
ccggctgctgggcagacggagaagagcgccagcaagccaaagccccaggtgagccattcc
tccaggctgtcctctgatctgactagagagacggatgaggctgcttttgaaccagactat
aacgagagcgacagtgagagtaatgtgtctgtgaaggaagaagaaactgttgccagtatc
tccaaggacttgaaagagaaaaccacagagaaggcaaaagagagcgagaatgtagcaaca
gccagccagccagttgcagacaggagccagagccaaagtagccccagtgttagtccaagt
agaagtcatagcccttccggtagccagacccggagccacagcagcagtgccagctcagca
ggaagccaagacagcaagaagaagaaaaagaagaaagacaagaaaaagcacaagaagcat
aaaaagcacaagaagcacaagaagcacgcagccgcggatggcgatgtggagaagagccag
aaacataaacacaagaagaagaaggcgaagaagaacaaagacaaggagaaggagaaagat
gaccaaaaagtgaaatctgtcactgtgtga
DBGET
integrated database retrieval system
