Apodemus sylvaticus (European woodmouse): 127697168
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Entry
127697168 CDS
T10613
Symbol
Slamf1
Name
(RefSeq) signaling lymphocytic activation molecule
KO
K06536
signaling lymphocytic activation molecule family member 1
Organism
asyl Apodemus sylvaticus (European woodmouse)
Pathway
asyl03265
Virion - Ebolavirus, Lyssavirus and Morbillivirus
asyl04517
IgSF CAM signaling
asyl05162
Measles
Brite
KEGG Orthology (KO) [BR:
asyl00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
127697168 (Slamf1)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
127697168 (Slamf1)
09160 Human Diseases
09172 Infectious disease: viral
05162 Measles
127697168 (Slamf1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
asyl04515
]
127697168 (Slamf1)
04090 CD molecules [BR:
asyl04090
]
127697168 (Slamf1)
Cell adhesion molecules [BR:
asyl04515
]
Immunoglobulin superfamily
SLAM/CD2 family
127697168 (Slamf1)
CD molecules [BR:
asyl04090
]
Proteins
127697168 (Slamf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SLAM
Ig_3
ig
I-set
Ig_2
V-set
Receptor_2B4
DUF5737
Motif
Other DBs
NCBI-GeneID:
127697168
NCBI-ProteinID:
XP_052056050
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All DBs
Position
12:79325200..79359370
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AA seq
342 aa
AA seq
DB search
MDPDGSLSLRILLFFSLAFELSYGTGGNVMDCTVILQKLGHDTWLSLINEHQINKSVNKS
IRILVMMPTSPGSKTNRKIVSFDLSKGGSPDHLEDGYQFQSKNLSLKILGDRRENEGVYF
VSVEENVSVQQFCIQLKLYEQVSTPEIKVLNKTQENENGTCSLLLACTVKKGDHVAYSWS
DEAGTHLLSPANRSHLLNITLSDQHQDSIYNCTASNPVSSLSKTFDLRQECWPKSFSERS
QWIPYTTAPLGVIIIIILVSTAIIMVKRQGKPNNCQPPKEEKSLTIYAQVQKSGPLEKKL
QDALTDQDPCTTIYVAATEPAPESVQEPNPTTVYVSVTLPES
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atggatcccgacggatccctttccttgagaatacttctgtttttctccctggcttttgag
ttgagctacggaacaggtggaaatgtgatggattgcacagtgattctccagaagctggga
catgacacatggctgtctctgatcaatgaacatcagataaacaagagcgtgaacaaaagt
atccgcatccttgtcatgatgccaacgtctccaggaagcaaaaccaacaggaaaatagtg
tcctttgatctctctaaagggggctctccagatcatctggaggatggctaccagtttcag
tcaaaaaacctgagcctgaagatcctaggggacaggcgggagaatgaaggagtgtacttt
gtgagcgtggaggagaatgtgtctgttcagcaattctgcatacagctgaagctttatgag
caggtctccactccagagattaaagtgctaaacaaaacccaggagaacgagaatgggacc
tgcagcttgctgttagcctgcacagtgaagaaaggggatcatgtggcttacagctggagt
gatgaggcaggcacacacctgctgagcccagccaaccgctcccacctcctgaacatcacg
cttagcgaccagcaccaagatagcatctacaactgcaccgcaagcaaccctgtcagcagt
ctctctaagaccttcgacctacggcaagaatgctggccaaaatccttctcagaacggagt
cagtggataccatatacaactgcaccattgggggtcattataatcatcatcctggtttcc
acggcaataataatggtgaaaagacaaggtaaaccaaataactgccagccaccaaaggaa
gaaaaaagcttgactatttatgcccaagtacaaaagtcagggcctctagagaagaaactc
caagatgctttgacagatcaggacccctgcacgaccatttatgtggctgccacagagcct
gccccagagtctgtccaggaaccaaaccccaccacagtttatgtcagcgtgacactgcct
gagagctga
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