Apodemus sylvaticus (European woodmouse): 127697351
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Entry
127697351 CDS
T10613
Symbol
Tnr
Name
(RefSeq) tenascin-R isoform X1
KO
K06252
tenascin
Organism
asyl Apodemus sylvaticus (European woodmouse)
Pathway
asyl04151
PI3K-Akt signaling pathway
asyl04510
Focal adhesion
asyl04512
ECM-receptor interaction
asyl04518
Integrin signaling
asyl05165
Human papillomavirus infection
asyl05206
MicroRNAs in cancer
Brite
KEGG Orthology (KO) [BR:
asyl00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
127697351 (Tnr)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
127697351 (Tnr)
04518 Integrin signaling
127697351 (Tnr)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
127697351 (Tnr)
09160 Human Diseases
09161 Cancer: overview
05206 MicroRNAs in cancer
127697351 (Tnr)
09172 Infectious disease: viral
05165 Human papillomavirus infection
127697351 (Tnr)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
asyl00536
]
127697351 (Tnr)
Glycosaminoglycan binding proteins [BR:
asyl00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
127697351 (Tnr)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
fn3
Fibrinogen_C
EGF_TEN
EGF_Tenascin
EGF_Teneurin
FN3_DSCAM-DSCAML_C
Fn3_Dep-1_3rd
Fn3_PBP1
Pur_ac_phosph_N
Fn3_VIN3
EGF_2
FN3_Tor_3rd
DUF7949
Ig_ANOS1
Motif
Other DBs
NCBI-GeneID:
127697351
NCBI-ProteinID:
XP_052056367
LinkDB
All DBs
Position
12
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AA seq
1358 aa
AA seq
DB search
MGMDGETVVLKNMLIGVNLILLGSMLKPSECRLEVTTERVQRQTVEEEGGASSYNASSKE
QPMVFNHVYNINVPLESLCSSGLEASAEQDLSAEDDSLAEYTGQTSDHESQVTFTHKINL
PKKACSCASSSQVLQELLSRIEMLEREVSLLRDQCNTNCCQESAATGQLDYVPHCSGHGN
FSFESCGCICNEGWFGKNCSEPYCPLGCSSRGVCVDGQCICDSEYSGDDCSELRCPTDCS
SRGLCVDGECVCEEPYTGEDCRELRCPGDCSGKGQCANGTCLCQEGYAGEDCSQRRCLNA
CSGRGHCQEGLCICEEGYQGPDCSAVAPPEDLRVAGISDRSIELEWDGPMAVTEYVISYQ
PTALGGLQLQQRVPGDWSGVTITELEPGLTYNISVYAVISNILSLPITAKVATHLPTPQG
LQFKTITETTVEVQWEPFSFSFDGWEISFIPKNNEGGVIAQLPSDVTSFNQTGLKPGEEY
IVNVVALKEQARSPPTSASVSTVIDGPTQILVRDVSDTVAFVEWTPPRAKVDFILLKYGL
VGGEGGKTTFRLQPPLSQYSVQALRPGSLYEVSISAVRGTNESDASSTQFTTEIDAPKNL
RVGSRTATSLDLEWDNSEAEAQEYKVVYSTLAGEQYHEALVPKGIGPTTKTTLTDLVPGT
EYGVGISAVMNSKQSIPATMNARTELDSPRDLMVTASSETSISLIWTKASGPIDHYRITF
TPSSGISSEVTVPRDRTSYTLTDLEPGAEYIISITAERGRQQSLESTVDAFTGFRPISHL
HFSHVTSSSVNITWSDPSPPADRLILNYSPRDEEEEMMEVLLDATKRHAVLMGLQPATEY
IVNLVAVHGMVTSEPIVGSITTGIDPPKNITISNVTKDSLTVSWSSPVAPFDYYRVSYRP
TQVGRLDSSVVPNTVTEFTITRLYPATEYEISLNSVRGREESERICTLVHTAMDSPTDLI
ATNITPTEALLQWKAPMGEVENYVIVLTHFAIAGETILVDGVSEEFQLVDLLPSTHYTVT
MYATSGPLMSGTITTNFSTLLDPPDNLTASEVTRQSALISWQPPRAAIENYVLTYKSTDG
SRKELIVDAEDTWIRLEGLSENTDYTVLLQAAQEATRSSLTSTVFTTGGRVFSHPQDCAQ
HLMNGDTLSGVYTIFLNGELSHKLQVYCDMTTDGGGWIVFQRRQNGQTDFFRKWADYRVG
FGNLEDEFWLGLDNIHRITAQGRYELRVDMRDGQEAVFAYYDKFTVEDSRSLYKLRIGGY
NGTAGDSLSYHQGRPFSTEDRDNDVAVTNCAMSYKGAWWYKNCHRTNLNGRYGESRHSQG
INWYHWKGHEFSIPFVEMKMRPYIHRLTAGRKRRALKF
NT seq
4077 nt
NT seq
+upstream
nt +downstream
nt
atggggatggacggggaaacagtagtcctgaagaacatgctcattggtgtaaacctgatc
ctgttgggatccatgctcaagccttctgaatgccggctggaggtgactacagaaagggtc
cagagacaaactgtggaggaggaaggaggggcttccagctacaatgcatccagcaaggaa
cagcctatggtcttcaaccatgtgtataacatcaatgtgccacttgaaagcctctgttcc
tcagggctggaggcctcagctgagcaggacttgagtgccgaagatgattctctggcggaa
tacacaggccagacctcagaccatgaaagccaggtcacctttacccacaagatcaacctc
cccaaaaaagcctgctcatgtgcaagttcttcccaggtactgcaggaactgttgagccgg
atcgagatgctggaaagggaggtgtccctgctccgagaccagtgcaacaccaactgctgt
caggaaagtgctgccacaggacaactggactatgtccctcactgtagcggccatggcaac
tttagcttcgagtcctgtggctgcatctgcaatgaaggctggtttggcaagaactgctca
gagccctactgcccactgggctgctccagtcggggtgtgtgtgtcgatggccagtgcatt
tgtgacagtgaatacagcggagacgactgttcagagctccggtgcccaacagactgcagt
tcccgaggactctgtgtggatggggaatgtgtctgtgaagagccctacacaggcgaggac
tgcagggagctgcgctgccctggggactgttcagggaaggggcaatgtgccaatggtacc
tgcctgtgccaagagggctatgctggtgaggactgcagccagcgacggtgtctgaatgcc
tgcagtgggagaggtcactgccaggaggggctctgcatctgtgaggagggctaccagggc
cctgactgctcagcagttgcccctccagaggacttgcgagtggctggtatcagcgacagg
tccattgagctggaatgggacgggccgatggcagtgacggaatatgtgatctcttaccag
ccgacggccctggggggccttcagctccagcagcgggtacctggagattggagtggtgtc
accatcacggagctggagccaggtctcacctacaacatcagcgtctatgctgtcattagc
aacatcctcagccttcccatcactgccaaggtggccactcatctccccactcctcaagga
ctacagttcaagacgatcacagagaccaccgtggaggtgcagtgggagcccttctctttc
tccttcgatgggtgggagatcagcttcattccaaagaacaatgaaggaggggtgattgct
cagctgcccagcgatgttacatcctttaaccagacaggactgaaacctggggaagagtac
attgtgaatgttgtagctctaaaagaacaagcccggagccctcctacctctgccagcgtc
tccactgtcatcgatggacccacgcagatcctggttcgagatgtctctgatactgtggct
tttgtggaatggaccccacctcgagccaaagttgatttcattctcttaaaatatggcttg
gtgggtggagaaggcgggaaaactaccttccggctacagccccccctcagccagtactca
gtgcaagcccttagacctggctccctctacgaggtgtccatcagcgcagtccggggaacc
aatgaaagtgatgcctcaagcacccaatttacaacagagattgatgctcccaagaatttg
cgagtgggttcccgcacagcaactagccttgaccttgaatgggataacagcgaggcagaa
gctcaggagtacaaggttgtgtatagcaccctagctggtgagcagtaccatgaagcgctg
gtacccaagggcattggcccaactaccaagactaccctcacagatctggttccagggaca
gagtatggagttggaatatctgcagtaatgaactcgaaacaaagcattcctgctaccatg
aatgccaggactgaacttgacagtccccgagacctcatggtaacagcctcctcagagacc
tctatctctctcatctggaccaaggccagtggtcccattgatcactacagaattactttt
accccatcttctgggatctcctcagaagttactgtacctagggataggacttcatataca
ctaacagatctagagcctggagcagaatacatcatctccatcactgctgaaagaggtcgg
caacagagcctggagtctactgtggatgccttcacaggcttccgccctatctcccatttg
cacttctctcatgtgacctcctccagtgtcaatatcacctggagcgacccatctccccca
gcagacagactcattctgaactacagccccagggatgaagaggaggagatgatggaagtc
ctcttggatgccaccaagaggcacgctgtcctgatgggtctacagccagccaccgaatat
atagtgaaccttgtagctgtccatgggatggtaacctctgaacccatagtgggttctatc
actacaggaattgatcctcccaaaaacatcacaattagcaacgtgactaaggactccctg
actgtttcctggagctctcctgttgcgccttttgattactaccgagtatcatatcgaccc
acccaagtggggcggctagacagctctgtggtgcccaacactgtgacagagttcaccatc
accaggctgtatccggctactgaatatgaaataagcctcaacagtgtacggggcagagag
gagagtgaacgcatctgcaccctggtgcacacagccatggatagccccacagatctgatc
gctactaacatcacgccgacagaagccctgcttcaatggaaagcacccatgggtgaagtg
gaaaattatgtcatcgtcctcacacactttgcaattgctggagagaccatcctggttgat
ggagtcagtgaagaattccagcttgtagacctgcttcctagcacccactacactgtcacc
atgtatgccaccagtgggcctctcatgagtggcactatcaccaccaacttctccaccctc
ctcgaccctcctgacaacctgacagccagtgaagtcaccaggcaaagtgcactgatctcc
tggcagccacccagagctgcgattgaaaactacgtcttgacgtacaagtccaccgacgga
agccgcaaggaactgattgtggatgctgaggacacctggatccggctggagggcctgtca
gagaacacagactacacagtgctcctgcaggcagctcaggaggccacaaggagcagcctc
acctctacggtctttaccacagggggccgggtgttctctcatcctcaagactgtgcccaa
catttgatgaatggagacactctgagtggagtttacaccatcttcctcaatggggagcta
agtcacaagttgcaagtatactgtgacatgaccacagatgggggtggctggatcgtattc
cagaggcggcaaaatggccaaactgactttttccggaaatgggcagattatcgtgttgga
tttgggaatctggaggatgagttttggctagggctagacaacatccacaggataacagct
cagggccgctacgaactgcgtgtggatatgcgggatggacaggaagcagtctttgcctat
tatgacaagttcactgtggaggacagcagaagcctatacaagctccgcataggaggctac
aatggcactgcaggagactccctcagctatcaccagggacgtccattctctaccgaggac
agagacaacgacgttgcagtcaccaactgtgccatgtcatacaagggtgcttggtggtat
aagaactgccaccggaccaacctcaatgggagatatggggaatccaggcacagtcagggg
atcaactggtaccattggaaaggccatgaattctccatcccctttgtagaaatgaagatg
aggccctacatccatcgtctcacagccgggaggaaacggcgagccttgaaattctga
DBGET
integrated database retrieval system
