Apodemus sylvaticus (European woodmouse): 127697374
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Entry
127697374 CDS
T10613
Symbol
Nfasc
Name
(RefSeq) neurofascin
KO
K06757
neurofascin
Organism
asyl Apodemus sylvaticus (European woodmouse)
Pathway
asyl04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
asyl00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
127697374 (Nfasc)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
asyl04515
]
127697374 (Nfasc)
Cell adhesion molecules [BR:
asyl04515
]
Immunoglobulin superfamily
L1 family
127697374 (Nfasc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
fn3
Ig_2
ig
Bravo_FIGEY
V-set
Ig_DSCAM-DSCAML_C
Ig_5
V-set_CD47
C2-set_2
Ig_VEGFR-1-like_5th
BiPBP_C
DUF4998
Motif
Other DBs
NCBI-GeneID:
127697374
NCBI-ProteinID:
XP_052056439
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All DBs
Position
12:complement(39093543..39262292)
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AA seq
1341 aa
AA seq
DB search
MARQQAPPWIHVALILFLLSLGGAIEIPMDLTQPPTITKQSVKDHIVDPRDNILIECEAK
GNPAPSFHWTRNSRFFNIAKDPRVSMRRRSGTLVIDFRSGGRPEEYEGEYQCFARNKFGT
ALSNRIRLQVSKSPLWPKENLDPVVVQEGAPLTLQCNPPPGLPSPVIFWMSSSMEPITQD
KRVSQGHNGDLYFSNVMLQDMQTDYSCNARFHFTHTIQQKNPFTLKVLTTRGVAERTPSF
MYPQGTSSSQMVLRGMDLLLECIASGVPTPDIAWYKKGGDLPSDKAKFENFNKALRITNV
SEEDSGEYFCLASNKMGSIRHTISVRVKAAPYWLDEPKNLILAPGEDGRLVCRANGNPKP
TVQWMVNGEPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVL
DVPPRMLSPRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNGQGSNLDGGNYHVYENGSL
EIKMIRKEDQGIYTCVATNILGKAENQVRLEVKDPTRIYRMPEDQVAKRGTTVQLECRVK
HDPSLKLTVSWLKDDEPLYIGNRMKKEDDSLTIFGVAERDQGSYTCMASTELDQDLAKAQ
LTVLADQATPTNRLTALPKGRPDRPRDLELTDLAERSVRLTWIPGDDNNSPITDYVVQFE
EDQFQPGVWHDHSKFPGSVNSAVLHLSPYVNYQFRVIAVNEVGSSHPSLPSERYRTSGAP
PESNPSDVKGEGTRKNNMEITWTPMNATSAFGPNLRYIVKWRRRETRETWNNVTVWGSRY
VVGQTPVYVPYEIRVQAENDFGKGPEPDTVIGYSGEDYPRAAPTEVKIRVLNSTAISLQW
NRVYSDTVQGQLREYRAYYWRESSLLKNLWVSQKRQQASFPGDRPRGVVARLFPYSNYKL
EMVVVNGRGDGPRSETKEFTTPEGVPSAPRRFRVRQPNLETINLEWDHPEHPNGILIGYT
LRYVPFNGTKLGKQMVENFSPNQTKFSVQRADPVSRYRFSLSARTQVGSGEAATEESPAP
PNEATPTAAPPTLPPTTVGTTDLVSSTDATALAATSEATTVPIIPTVVPTTVATTIATTT
TTTAAATTTTTTESPPTTTTGTKIHETAPDEQSIWNVTVLPNSKWANITWKHNFRPGTDF
VVEYIDSNHTKKTVPVKAQAQPVQLTDLFPGMTYTLRVYSRDNEGISSTVITFMTSTAYT
NNQADIATQGWFIGLMCAIALLVLILLIVCFIKRSRGGKYPVREKKDVPLGPEDPKEEDG
SFDYSDEDNKPLQGSQTSLDGTIKQQESDDSLVDYGEGGEGQFNEDGSFIGQYTVKKDKE
ETEGNESSEATSPVNAIYSLA
NT seq
4026 nt
NT seq
+upstream
nt +downstream
nt
atggccaggcagcaggcgccaccctggatccatgtagccctcatcctcttcctcctcagc
ctcggaggggccattgagattccgatggatctgacccaacccccaactatcaccaagcag
tctgtgaaggaccacatcgtggatccccgcgataacattctgattgaatgtgaagctaaa
ggcaaccccgcccccagttttcactggactcgcaacagcagattcttcaacattgccaag
gaccctcgggtgtccatgaggaggaggtctgggaccttggtgatcgacttccgcagtggc
gggcggcctgaggagtatgaaggggagtaccagtgcttcgcccggaacaaattcggcact
gcgcttagcaaccgcatccgcctgcaggtgtccaaatcacccctgtggcccaaggaaaac
ctagaccccgttgtggtccaagagggcgcccctttgacactgcagtgcaaccccccacct
ggcctcccgtcccccgtcatcttctggatgagcagctccatggagcccatcacccaggac
aagcgtgtctcccagggtcataacggggacctgtacttctccaacgtcatgctgcaggac
atgcagaccgactacagctgcaacgcgcgcttccacttcacccacaccattcagcagaag
aaccccttcaccctcaaggtcctcaccacccgaggagttgcagaaagaacgcctagcttc
atgtatccccaaggcacttcaagcagtcagatggtactacgcggcatggacctgctgctg
gagtgcattgcctctggggtcccaacaccagacattgcatggtacaagaaaggtggggac
ctcccatctgacaaggccaagttcgagaactttaacaaggctctgcgcatcaccaatgtc
tccgaagaggactccggggaatatttctgcctggcctccaacaagatgggcagcatccgg
cacacgatctcggtgagagtaaaggctgctccatactggctggacgaacccaagaacctg
atcctggctcccggtgaagatgggaggctggtgtgccgagccaatgggaacccgaagccg
accgtgcagtggatggtgaacggagagcctttgcaatcggcaccacccaatcccaaccgt
gaggtggccggagacactatcatcttccgggatactcagatcagcagcagggcagtgtac
caatgtaacacatccaacgaacatggctacctgctggccaatgccttcgtcagcgtgtta
gatgtaccccctcggatgctgtctccccggaaccagctcatcagggtgatcctgtacaac
cggacacggctggactgtccgttctttggatctcccattccaacactccgatggtttaag
aacgggcaaggaagcaacctggatggtggtaactaccacgtctacgagaacggcagtcta
gaaatcaagatgattcgcaaagaggaccaaggcatctatacctgtgtggccaccaacatc
ctgggcaaagctgaaaatcaagtccgcctggaggtcaaggaccccaccaggatctaccgg
atgcccgaggaccaggtggccaagaggggcaccacggtgcagctggagtgccgcgtgaag
cacgacccctccttgaagctcacagtctcctggttgaaggacgacgagccgctctatatt
ggaaacaggatgaagaaggaagacgactccctgaccatctttggagtggcagagcgggat
caaggcagctacacatgtatggctagcaccgaactggaccaggacctggcaaaggcccag
ctcactgttctagctgatcaggccactccaactaaccgtttgactgccctgcccaaaggg
cggccagaccgacccagggacctagagctcactgacctggctgagaggagtgtgaggctg
acctggatcccaggggatgacaacaacagccctatcacagactacgtcgttcagtttgaa
gaggaccagttccaaccaggggtctggcatgaccactccaagttcccaggcagtgtcaac
tcagccgtcctccatctgtccccatatgtcaactaccaattccgagtcatcgctgtcaac
gaggtcgggagcagccaccccagccttccgtccgagcggtatcgcaccagcggggcaccc
cctgaatccaatcccagtgatgtgaagggtgaagggacaagaaagaacaatatggagatc
acgtggacgcctatgaatgctacctctgcctttggccccaacctgcgctacattgtcaag
tggcggcggagagagacccgagagacttggaacaatgtcacagtgtggggttctcgctac
gtggtggggcagacgcctgtctacgtaccctacgagatccgagtccaggctgaaaatgac
tttgggaagggccccgagcctgacaccgtcatcgggtactcgggagaagattatcccagg
gctgcgcccactgaagttaaaatccgagtcctgaacagcacagccatcagccttcagtgg
aaccgagtctactctgacacggtccagggccagctcagggagtaccgagcttactactgg
agggaaagcagtttgctgaagaacctgtgggtgtctcagaagagacagcaggccagcttc
cctggtgaccgtccccggggcgtggtggctcgcctgttcccctacagtaactacaagctg
gagatggttgtggtcaatgggagaggtgacggacctcgaagtgaaaccaaggagttcacc
accccggaaggagtacccagtgcccccaggcgtttcagagtccgacagcccaacctggag
accatcaacctggagtgggaccacccagagcaccccaacggaatcctgattggatacact
ctcagatacgtgccctttaatggaaccaaactgggaaagcagatggtggaaaacttctct
cccaaccagaccaagttctcggtgcagagagcagaccccgtgtcgcgttaccgcttctcc
ctcagtgccaggacgcaagtgggctctggagaagcagccacggaggagtccccagcacct
ccaaatgaagctactccgactgcagctcctcccacattgcccccgactaccgtgggtacc
acagaccttgtgagcagtactgatgctactgcccttgctgccaccagtgaagccacaaca
gttcccatcattccaaccgtcgtacctaccaccgtcgccaccaccattgccacaactact
acaaccactgccgccgccaccaccaccaccactacggagagtcctcccactaccaccact
gggactaagattcacgaaaccgcccccgacgagcagtccatttggaacgtcacggtgctc
cccaacagtaaatgggccaacatcacctggaagcacaatttcaggcctggaactgacttt
gtggttgagtacatcgacagcaaccatacgaaaaaaactgtccctgttaaggcccaggcc
cagcctgtacagctgacagacctctttcccgggatgacgtacacattgcgggtatattcc
cgggacaacgagggcatcagcagtaccgtcatcacctttatgaccagtacagcttacacc
aataaccaggcagacatcgccacccagggctggttcatcgggctcatgtgtgccattgcc
ctactggtgctgatccttctcatcgtctgcttcatcaagaggagtcgcggtggcaagtac
ccagtgcgagaaaagaaggatgtccccttgggccctgaagaccccaaagaagaagatggc
tcatttgactacagtgatgaggacaacaagccccttcagggcagccagacatctctggat
ggcaccatcaagcaacaggaaagtgacgacagcctggtggactatggcgagggaggcgag
ggccagttcaacgaagacggctccttcatcggccagtacactgtcaaaaaggacaaggag
gaaacagaaggcaatgagagctcagaggccacgtcgccagtcaacgccatctattccctg
gcctga
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