Apodemus sylvaticus (European woodmouse): 127697426
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Entry
127697426 CDS
T10613
Symbol
Tpr
Name
(RefSeq) nucleoprotein TPR isoform X1
KO
K09291
nucleoprotein TPR
Organism
asyl Apodemus sylvaticus (European woodmouse)
Pathway
asyl03013
Nucleocytoplasmic transport
asyl05014
Amyotrophic lateral sclerosis
asyl05200
Pathways in cancer
asyl05216
Thyroid cancer
Brite
Messenger RNA biogenesis [BR:
asyl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
127697426 (Tpr)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
127697426
NCBI-ProteinID:
XP_052056527
LinkDB
All DBs
Position
12:57722768..57774620
Genome browser
AA seq
2435 aa
AA seq
DB search
MPSSGSVSRSGHREVPMTSRGFDGSRRGSLRRAGARESASEAADGAAQASGLRASPCSFA
SPSAAAATTTPADMAAVLQQVLERPELNKLPKSTQNKLEKFLAEQQSEIDCLKGRHEKFK
VESEQQYFEIEKRLSQSQERLVNETRECQNLRLELEKLNNQVKVLTEKSKELETAQDRNL
GIQSQFTRAKEELEAEKRDLIRTNERLSQEVEYLTEDVKRLNEKLKESNTTKGELQLKLD
ELQASDVAVKYREKRLEQEKELLHNQNSWLNAELKTKTDELLALGREKGNEILELKCNLE
NKKEEVLRLEEQMNGLKTSNEHLQKHVEDLLTKLKEAKEQQASMEEKFHNELNAHIKLSN
LYKSAADDSEAKSNELTRAVDELHKLLKEAGEANKTIQDHLLQVEASKDQMEKEMLEKIG
KLEKELENANDLLSATKRKGAILSEEELAAMSPTAAAVAKIVKPGMKLTELYNAYVETQD
QLLLEKQENKRINKYLDEIVKEVEAKAPILKRQREEYERAQKAVASLSAKLEQAMKEIQR
LQEDTDKANKHSSVLERDNQRMEIQIKDLSQQIRVLLMELEEARGNHVIRDEEVSSADIS
SSSEVISQHLVSYRNIEELQQQNQRLLFALRELGETREREEQETTSSKIAELQHKLENSL
TELEQLRESRQHQMQLVDSIVRQRDMYRILLSQTTGMAIPLQASSLDDISLVSTPKRSST
SQTVSTPAPEPVMESTESIEAKAALKQLQEIFENYKKEKIDSEKLQNEQLEKLQEQVTDL
RSQNTKISTQLDFASKRYEMLQDNVEGYRREITSLQERNQKLTATTQKQEQIINTMTQDL
RGANEKLAVAEVRAENLKKEKEMLKLSEVRLSQQRESLLAEQRGQNLLLTNLQTIQGILE
RSETETKQRLSSQIEKLEHEISHLKKKLENEVEQRHTLTRNLDVQLLDTKRQLDTEINLH
LNTKELLKNAQKDIATLKQHLNNMEAQLASQSTQRTGKGQPGDRDDVDDLKSQLRQAEEQ
VNDLKERLKTSASNVEQYRAMVTSLEDSLNKEKQVTEEVHKNIEVRLKESAEFQTQLEKK
LMEVEKEKQELQDDKRKAIESMEQQLTELKKTLSSVQNEVQEALQRASTALSNEQQARRD
CQEQAKIAVEAQNKYERELMLHAADVEALQAAKEQVAKMTAIRQHLEETTQKAESQLLEC
KASWEERERVLKDEVSKSVSRCEDLEKQNRLLHDQIEKLSDKVVTSMKEVVQAPLNTSLS
EEGKSQEQILEILRFIRREKEIAETRFEVAQVESLRYRQRVELLERELQELQDSLNAERE
KVQVTAKTMAQHEELMKKTETMNVVMETNKMLREEKERLEQNLQQMQAKVRKLELDILPL
QEANAELSEKSGMLQAEKKLLEEDVKRWKARNQHLINQQKDPDTEEYRKLLSEKEIHTKR
IQQLNEEVGRLKAEIARSNASLTNNQNLIQSLKEDLSKVRAEKESIQKDLDAKIIDIQEK
VKTITQVKKIGRRYKTQFEELKAQQNKAMETSTQSSGDHQEQHISVQEMQELKDTLNQSE
TKTKSLESQVENLQKTLSEKETEARSLQEQTVQLQSELSRLRQDLQDKTTKEEQLRQQMN
EKDEKTWKAIAVARSKIAQLSGVKDQLTKENEELKQRNGALDQQKDELDVRMTALKSQYE
GRISRLERELREHQERHLEQRDEPQEPTNKAPEQQRQITLKTTPASGERGIASTSDPPTA
NIKPTPVVSTPSKVTAAAMAGNKSTPRASIRPMVTPATVTNPTTTPTATVMPTTQVESQE
AAMQSEGPVDHVPVFGSASGSVRSTSPNVQPSISQPILTVQQQTQATAFVQPTQQSHPQI
EPANQELSPNIVEVVQSSPVERPSTSTAVFGTVSATPSSSLPKRTREEEEDSTMEAGDQV
SEDTVEMPLPKKLKTVTPVGTEEEVMAEESTDGEVETQAYNQDSQDSIGEGVTQGEYTPM
EDSEETSQSLQIDLGPLQSDQQTTSSQDGQGKGDDVIVIDSDDEDDDEENDGEHEDYEED
EDDDDDEEDDTGMGDEGEDSNEGTGSADGNDGYEADDAEGGEGTDPGTETEESMGGAESN
QRAADSQNSGEGNTSAAESSFSQEVAREQQPTSASERQTPQAPQSPRRPPHPLPPRLTIH
APPQELGPPVQRIQMTRRQSVGRGLQLTPGIGGMQQHFFDDEDRTVPSTPTLVVPHRTDG
FAEAIHSPQVAGVPRFRFGPPEDMPQTSSSHSDLGQLASQGGLGMYETPLFLAHEEESGG
RSVPTTPLQVAAPVTVFTESATSDASEHASQSVPMVTTSTGTLSTTNETAAGDDGDEVFV
EAESEGISSEAGLEIDSQQEEEPVQASDESDLPSTSQDPPSSSSVDTSSSQPKPFRRVRL
QTTLRQGVRGRQFNRQRGISHAMGGRGGINRGNIN
NT seq
7308 nt
NT seq
+upstream
nt +downstream
nt
atgccctctagtggctcggtttcaagaagtggccacagagaagtacccatgacatcccgg
ggttttgacgggtcccgccgcgggagtctccggagggcaggcgcgcgggagtctgcgagc
gaggcagcggacggggcggctcaggcgtctgggctccgcgcttctccttgctccttcgct
tctccttcagccgctgctgccaccacgaccccggccgacatggcggcggtgttgcagcaa
gtgctggagcggccggagctgaacaaactgcctaagtcgacccagaacaaacttgagaag
ttcctggccgaacagcagtccgagatcgactgcctgaaggggcggcacgagaaatttaag
gtggagagtgaacaacaatactttgagatagagaagaggctatcccagagtcaggagagg
cttgttaatgaaacccgggagtgtcagaacttgaggctggagcttgagaagctaaataat
caagtaaaagtgttaactgagaaaagcaaagaacttgaaactgctcaagaccgtaatcta
ggcattcagagccagtttacaagagcaaaggaagagttagaagctgaaaaaagagattta
atcagaaccaatgagagattatctcaggaagttgaatatttaacagaggatgtcaaacgt
ctaaatgaaaaacttaaagaaagcaacacgacaaagggtgaacttcagttaaagttggat
gaacttcaagcttctgatgttgctgtgaagtatcgagaaaaacgcttagaacaagaaaag
gaattgctacacaatcagaattcatggctgaacgcagagttgaaaaccaaaactgatgag
ctattggctctaggaagagaaaaaggaaatgaaattctggaacttaagtgtaatcttgaa
aacaaaaaagaagaggttttgagactggaagaacagatgaatggcttgaaaacatcaaat
gaacatcttcagaaacatgtagaggacttgttgacaaaattaaaagaggccaaagaacag
caggccagtatggaagagaaattccacaatgaattaaatgctcacataaagctctctaac
ctatacaagagcgctgctgatgactcggaggcaaagagtaatgaactcacccgggcagtg
gacgagctgcacaaactgctcaaggaagctggagaagccaacaaaacaatacaagatcat
cttctacaagtggaagcatctaaagatcagatggaaaaagaaatgcttgagaaaatagga
aaattggagaaggaattagagaatgcaaatgacctgctttccgccacaaaacgtaaagga
gctatattgtctgaagaagagctggcagccatgtctcccaccgcagcagccgtggctaaa
atcgtaaagccaggcatgaaattaactgagctatataatgcttatgtggaaactcaggat
caattgcttttggaaaaacaagaaaataaaaggattaataagtacctagacgagatagta
aaagaagtggaagccaaagcaccaatcttgaaacgccagcgtgaagagtatgagcgggca
cagaaagctgtggccagtctgtctgcaaagcttgagcaagctatgaaggagattcagcgg
ttacaggaggatactgataaagccaacaaacattcatcagtacttgaaagggacaatcag
agaatggaaatacaaataaaagatctttcacaacagattagagtgctcttgatggaactg
gaagaagccaggggtaaccatgtaattcgggatgaggaggtcagctctgctgacataagc
agttcgtctgaagtaatctcgcagcatctagtgtcttacaggaatattgaagagctccag
cagcagaaccagcggctgctgtttgctcttcgagaacttggggaaaccagggaacgagaa
gaacaagagacgacttcctctaagattgctgaacttcaacataaacttgaaaactctctc
actgaactggagcagctccgtgagtcacggcagcatcagatgcagctggttgattccata
gttcgtcagcgtgacatgtaccgaattttattgtcacaaacaacaggaatggccattcca
ttacaagcttcaagcttagatgatatttctcttgtgtcaactccaaaacgttcaagtaca
tcacagactgtttctactcctgctccagaaccggtgatggaatccacagagtcaatagaa
gcaaaggctgcccttaaacagttgcaggaaatctttgagaactataaaaaagaaaaaata
gacagtgaaaaacttcaaaatgagcagctagagaaacttcaagagcaagtcacagacctt
cgctcacaaaacaccaaaatttctactcagctagattttgcttctaaacgttatgaaatg
ctgcaagataatgtagaaggatatcgccgagaaataacatctctacaagagagaaatcag
aaactcactgcaactacgcagaagcaggaacagatcatcaacacaatgacacaagacttg
agaggagccaatgaaaagctagctgttgcagaagtaagagcagaaaatttgaagaaggaa
aaagaaatgcttaaattgtctgaagtccgtctgtctcagcaaagagagtctttgttagct
gaacagaggggacagaacttgttgctgactaatctacaaacaatccagggcatactagag
cgatccgagactgaaaccaaacaaaggctgagtagccagatagaaaaattggagcatgag
atctctcacctgaagaaaaagttggaaaacgaagtggaacaaagacatacgcttaccagg
aatctagatgttcaactgttagataccaagagacaactagatacagaaataaatcttcat
cttaacacaaaagaactgttaaaaaatgcccagaaggacattgctacactgaaacagcac
cttaataatatggaagcccagcttgcttctcagtccacacagagaaccggtaaaggtcag
cctggtgacagagatgatgttgatgatcttaaaagtcagctaaggcaggctgaagaacag
gtcaatgacttgaaggagagactcaagacaagtgctagtaacgtggagcagtatcgagcc
atggtgaccagcttagaggattctctgaacaaggagaaacaggtgactgaggaggtccat
aagaacattgaagtgcgcttgaaagaatcagcagagtttcagacacagctggagaaaaag
ttaatggaagtagagaaggagaagcaagaacttcaggatgacaagaggaaagccatcgag
agcatggaacagcaattaactgaattgaagaaaacactatctagtgttcagaatgaagta
caagaagctctgcagagagcaagcacagctctaagtaatgagcagcaagccaggcgtgac
tgtcaggaacaagctaaaatagctgtggaagctcagaataagtatgaaagagaattgatg
ctgcatgctgctgatgtcgaagctctgcaagctgccaaggaacaggttgcaaaaatgacg
gcaatccgtcagcatttggaagaaacaactcagaaagcagaatcacagctgctggaatgt
aaagcatcttgggaagaaagagagagagtgttaaaggatgaagtttccaagagtgtgtct
cgctgtgaagatctagagaaacagaacagactacttcatgatcaaatcgaaaaattaagt
gacaaggtggtcacctccatgaaggaggttgtgcaagcaccattaaacacatctctcagt
gaagaagggaaatctcaagaacaaattttagaaattcttagatttattcgacgagaaaaa
gaaattgctgaaactagatttgaggtggctcaggttgagagtctgcgatatcgacaaaga
gttgaacttctagagcgggagttgcaggaactgcaggatagcctgaatgcggaaagggaa
aaggtgcaggtaactgcaaaaacaatggcgcaacatgaagaactaatgaagaaaactgaa
acaatgaatgtagttatggagaccaataagatgctaagggaggaaaaggaaaggctcgaa
cagaacctacaacaaatgcaagcaaaggtgaggaagctggagctggacatcttacccttg
caggaggccaacgctgagctaagcgagaagagcggcatgctgcaggccgagaagaagctc
ctggaggaggacgtcaagcgttggaaagcacggaaccagcatctaataaatcagcagaaa
gatccagatacagaagaatatcgaaagttgctttctgaaaaggaaattcataccaagaga
attcagcagctgaatgaagaagttggaagactaaaggctgaaattgcaagatcaaatgca
tccttgactaacaaccagaatttaatccagagtctgaaggaagatttaagtaaagtacga
gctgaaaaggaaagcattcagaaagatttagatgccaaaataattgatatacaggaaaaa
gtcaaaacgatcactcaagtcaagaaaattgggcgcaggtacaagactcagtttgaagaa
cttaaagcgcagcagaataaggctatggagacttccactcagtcttcaggagaccatcag
gaacagcacatctctgtccaggaaatgcaggagctcaaagataccctcaaccaatctgaa
acaaagacaaagtcacttgagagtcaagtagagaatctgcagaagacattatctgaaaaa
gagacagaagcgaggagtctccaggaacagaccgtgcagcttcagtctgaactgtcacgc
cttcgtcaggacctccaggataaaaccacaaaagaggagcagctgcgacagcagatgaat
gaaaaggacgagaaaacatggaaggcgattgcagtagccagatcaaagattgcacaactc
tctggtgtgaaagatcagctaactaaagaaaatgaagagcttaaacaaaggaatggagct
ttagatcagcagaaagatgaactcgatgtccgaatgactgctcttaagtcccagtatgaa
ggtcggattagtcgcttagagagagagctcagagagcatcaagagcggcaccttgagcag
agagatgagcctcaggagcccacgaataaggctccagaacagcagagacaaatcacactg
aaaaccactccagcttctggtgaaagaggaattgccagcacgtcagacccaccaacagcc
aatatcaagccaactcctgttgtttctactccaagtaaagtgacagctgcagctatggct
gggaataagtcaacacccagggcaagtatccgcccaatggttacacctgcaactgtcacc
aatccaaccactaccccaacagcaaccgtaatgcctactacacaggtggagtcacaggaa
gcagccatgcagtcagaagggcctgtggaccatgttccagtgtttggaagcgcaagtgga
tctgtccgttctactagtcctaatgttcagccctccatttctcagcccatcctaaccgta
cagcagcaaacacaggccacagcttttgtacaacccacgcaacagagtcaccctcagatt
gagcctgcaaaccaagagttgtccccaaacatagttgaagttgtacaaagttcaccagtg
gagcggccatctacatccacagcagtatttggcactgtttcagctaccccaagttcctcc
ttgcctaagcgcacgcgcgaggaggaggaggacagcaccatggaagcaggagaccaagtc
tctgaggacacagtggagatgcctctcccgaagaagctgaagacggtcacacctgtggga
accgaggaagaagttatggcagaagaaagtactgatggagaggtagaaactcaagcctat
aaccaggattctcaagattccattggagagggagtcacccagggagagtatacaccaatg
gaagacagtgaagaaacgtcacaatctctacaaattgatcttggaccacttcaatcagat
cagcagactacttcctctcaagatggtcaaggcaaaggagatgatgtaattgtaattgac
agtgatgatgaagatgatgatgaagaaaatgacggagaacatgaagattatgaagaagat
gaagatgatgatgatgatgaagaagatgacacggggatgggagatgagggtgaagatagt
aatgaaggaactggtagtgcagatggtaatgatggatatgaagctgatgatgctgagggt
ggtgaagggactgatccaggtacagaaacagaagaaagtatgggtggagctgaaagtaat
cagagagctgctgattctcaaaacagtggtgaaggaaatacaagtgcagcagagtcttct
ttctctcaggaggttgctagagagcagcagcccacatcagcgtctgagagacagacccca
caagcaccacaatcaccaaggcgccccccccatcctcttcccccacgcctgaccattcac
gccccacctcaggagctgggaccaccagttcagagaattcagatgacccggaggcagtct
gtagggcgtggacttcagttgactccaggaataggtggcatgcaacaacacttttttgat
gatgaagacagaacagttccaagtaccccaacgctcgtggtgccacatcgcactgatggg
tttgctgaagctattcattccccacaggttgctggtgttcctagattccggtttgggcca
cctgaagacatgccacagacaagttccagtcactctgatcttggccaacttgcttctcaa
ggaggtttaggaatgtatgaaacacccctctttctggctcatgaggaagagtctggtggc
cgcagcgttcccactacacctctccaagtagcagccccagtgactgtgtttactgagagt
gccacctctgatgcttcagaacatgcctctcagtctgttccgatggtgacaacatctaca
ggcactttatccacgacaaatgaaacagcagcaggtgacgacggagatgaagtatttgta
gaggcggagtctgaaggtattagttcagaggcaggcctagaaatcgacagccagcaggaa
gaggagcctgtccaggcatctgatgaatcagatcttccctccaccagccaagaccctccg
tccagctcctccgtagataccagtagtagtcaaccaaagcctttcagacgagtaagactt
cagacaaccttaagacagggtgttcgaggtcgtcagtttaaccgacaaagaggtataagc
catgcaatgggaggaagaggaggaataaatagagggaatattaattaa
DBGET
integrated database retrieval system
