Apodemus sylvaticus (European woodmouse): 127697444
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Entry
127697444 CDS
T10613
Symbol
Ddx18
Name
(RefSeq) ATP-dependent RNA helicase DDX18
KO
K13179
ATP-dependent RNA helicase DDX18/HAS1 [EC:
5.6.2.7
]
Organism
asyl Apodemus sylvaticus (European woodmouse)
Brite
KEGG Orthology (KO) [BR:
asyl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
asyl03041
]
127697444 (Ddx18)
03009 Ribosome biogenesis [BR:
asyl03009
]
127697444 (Ddx18)
Enzymes [BR:
asyl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
127697444 (Ddx18)
Spliceosome [BR:
asyl03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
127697444 (Ddx18)
Ribosome biogenesis [BR:
asyl03009
]
Eukaryotic type
90S particles
Helicases
127697444 (Ddx18)
Pre-60S particles
127697444 (Ddx18)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
Motif
Other DBs
NCBI-GeneID:
127697444
NCBI-ProteinID:
XP_052056569
LinkDB
All DBs
Position
12:complement(27823102..27836238)
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AA seq
660 aa
AA seq
DB search
MSQLQMKLLRKKIEKRNAKLRQRNLKLQEASEASLSQPQNGDVPRETGKDRKAKKALKHS
VPEGSAEAQSGGVPEETVENAKVKKSPPKLNTLANGEAAATPSPDSERKKKKKKKRKMAN
DAGPDTKKAKTEESAEAHEEPEAGVEKAEDSEVPSLPLGLTGAFEDTSFASLSNLVNENT
LKAIEEMGFKRMTEIQHKSIRPLLEGRDLLAAAKTGSGKTLAFLIPVIELIVKLKFMPRN
GTGVLILSPTRELAMQTFGVLKELMTHHVHTYGLIMGGSNRSAEAQKLVNGINIIVATPG
RLLDHMQNTPGFMYKNLQCLVIDEADRILDVGFEEELKQIIKLLPARRQTMLFSATQTRK
VEDLARISLKKEPLYVGVDDDKEVATVDGLEQGYVVCPSEKRFLLLFTFLKKNRKKKVMV
FFSSCMSVKYHYELLNYIDLPVLAIHGKQKQNKRTTTFFQFCNADSGILLCTDVAARGLD
IPEVDWIVQYDPPDDPKEYIHRVGRTARGLNGRGHALLILRPEELGFLRYLKQSKVPLNQ
FDFSWSKISDIQSQLEKLIEKNYFLHKSAQEGYKSYIRAYDSHSLKQIFDVNNLNLPQVA
LSFGFKVPPFVDLNVSSHDGKLKKRGGGGGFGYQKTKKVEKSKIFKHISKKPADRRQFSH
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcagttacagatgaaactcctgcggaagaagatcgagaagcggaacgccaagctg
cggcagcggaacctgaagctgcaagaagcatcagaggcgagcctgtcacaacctcaaaat
ggagacgtgcctagagaaacaggaaaagatagaaaagctaaaaaggccctgaagcattct
gtgcccgagggctcagcagaagcccaaagtggaggtgtgcctgaggagaccgtggaaaat
gccaaagttaaaaagtcacccccaaaacttaacactttagccaacggagaagcagcagcg
acaccatctcctgattcagaacggaaaaagaaaaagaagaaaaagaggaaaatggcaaat
gatgccgggcctgataccaaaaaagcaaaaactgaagaaagtgctgaggctcatgaagaa
ccagaagctggtgtggaaaaggcagaggacagcgaggtgcccagcctgcccctgggactg
acaggtgcttttgaggacacttcctttgcttccctatccaatctcgtcaatgagaacacc
ctgaaggccatagaagaaatgggcttcaagcgcatgacggagatccagcataaaagtatc
cggccgcttctggaaggcagggatcttctggcggctgcgaaaaccggcagtgggaaaacc
cttgctttcctcatccctgtgatcgagctcattgtcaaattgaagttcatgcccaggaac
ggaacaggagtcctgattctctctcctaccagagaactggccatgcagacctttggtgtt
cttaaggaactgatgacgcaccatgttcacacgtacgggctgatcatgggtggcagcaac
aggtctgcagaagcacagaagctcgtcaacgggatcaacatcattgtggccacgccaggc
cgcctcctggaccacatgcagaacacgccaggctttatgtacaagaacctacagtgtctg
gtgattgatgaggccgaccggatcttggatgttgggtttgaagaagaattaaagcaaatt
attaaacttttgccagcacgcaggcaaaccatgctcttttctgccacacaaactcgaaaa
gttgaagacttggcaagaatttctctgaaaaaagagccattgtacgtgggtgttgacgat
gacaaagaggttgccaccgtggatggccttgagcagggatatgttgtttgtccctccgag
aagaggttccttctgcttttcacgttccttaagaagaaccggaagaagaaagtgatggtc
ttcttttcatcttgcatgtctgtgaaataccactatgagctgctgaactacattgacctg
cccgtcttggccatccatggaaagcaaaagcaaaataagcgaacgaccacgttcttccaa
ttctgcaatgcagattcgggaatactgctgtgcactgatgtggcagccagagggctggac
atccctgaagtggactggattgttcagtacgaccctcccgatgaccccaaggaatacatt
catcgtgttggtagaacagccaggggcctgaatggaagggggcacgccctgctcatcctg
cgccctgaagagttgggtttccttcgttatctgaaacagtccaaggttccattaaatcag
tttgacttctcctggtctaaaatttcagatatccagtctcagctggaaaaactgatcgaa
aagaactactttctccacaagtctgcccaggaaggatacaaatcctacatccgagcgtat
gactcgcactcgctcaagcagatcttcgatgtcaacaacttaaatttgccgcaggtcgct
ctgtcttttggttttaaggtccctccttttgttgatctgaatgtgagcagccatgatggc
aaacttaaaaagagaggcggtggcgggggattcggctaccagaaaacaaagaaagtggag
aagtccaagatctttaaacacatcagtaagaagccagcagaccgcaggcagttctcccac
tga
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