Apodemus sylvaticus (European woodmouse): 127697497
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Entry
127697497 CDS
T10613
Name
(RefSeq) putative ATP-dependent RNA helicase Pl10 isoform X1
KO
K11594
ATP-dependent RNA helicase DDX3X [EC:
5.6.2.7
]
Organism
asyl Apodemus sylvaticus (European woodmouse)
Pathway
asyl04622
RIG-I-like receptor signaling pathway
asyl05161
Hepatitis B
asyl05203
Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:
asyl00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
127697497
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
127697497
09172 Infectious disease: viral
05161 Hepatitis B
127697497
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
asyl03019
]
127697497
03041 Spliceosome [BR:
asyl03041
]
127697497
03036 Chromosome and associated proteins [BR:
asyl03036
]
127697497
Enzymes [BR:
asyl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
127697497
Messenger RNA biogenesis [BR:
asyl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
127697497
mRNA cycle factors
Common to processing body (P body) and stress granule
127697497
Spliceosome [BR:
asyl03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
127697497
Chromosome and associated proteins [BR:
asyl03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
127697497
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Utp25_C
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
127697497
NCBI-ProteinID:
XP_052056644
LinkDB
All DBs
Position
12:94479656..94481650
Genome browser
AA seq
643 aa
AA seq
DB search
MSHVAEEDELGLDQQLAGLDLTSPDSQSGGSAAKAPYDKDSSRWSKDKDAYSSFGSRSDT
RAKSSFFGDRGSGSRGRFDDRGRSDYEGVGGRGGRSGFGKFERGGNSRWCDKADEDDWSK
PLPPSERLEQELFSGGNTGINFEKYDDIPVEATGNNCPPHIESFSDVEMGEIIMGNIELT
RYTRPTPVQKHAIPIIKEKRDLMACAQTGSGKTAAFLLPILSQIYTDGPGEALRAMKENG
KYGRRKQYPISLVLAPTRELAVQIYEEARKFSYRSRVRPCVVYGGADIGQQIRDLERGCH
LLVATPGRLVDMMERGKIGLDFCKYLVLDEADRMLDMGFEPQIRRIVEQDTMPPKGVRHT
MMFSATFPKEIQMLARDFLDEYIFLAVGRVGSTSENITQKVVWVEEADKRSFLLDLLNAT
GKDSLILVFVETKKGADSLEDFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSPILVAT
AVAARGLDISNVKHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNERNINITKDLLD
LLVEAKQEVPSWLENMAFEHHYKGGSRGRSKSRFSGGFGARDYRQSSGASSSSFSSGRAS
NSRSGGGSHGSSRGFGGGSYGGFYNSDGYGGNYSSQGVDWWGN
NT seq
1932 nt
NT seq
+upstream
nt +downstream
nt
atgagtcatgtggcggaggaagacgagctcgggctggaccagcagttggctggcctagac
ctgacgtctccggacagccagagcgggggcagcgccgccaaggcgccctacgacaaagac
agctcccggtggagtaaagacaaggatgcctacagcagcttcggctcccgcagcgacacg
agggccaagtccagcttcttcggcgaccgcggaagtggctccaggggaaggtttgacgac
cgcgggcggagtgactacgagggcgtcggcggccgcggcggccgcagtggcttcggcaaa
ttcgagcggggcgggaacagtcgctggtgtgacaaggcggacgaagacgactggtccaag
ccgctgcccccaagcgagcgcttggagcaggaactcttctctggaggcaacactgggatt
aactttgagaagtacgacgacatcccggttgaggcgacagggaataactgccctccgcat
attgagagcttcagcgacgtggagatgggagagattattatgggaaacatcgagcttact
cgctacacgcgcccgacgcctgtgcagaagcacgccattcctattatcaaggagaaaaga
gacttgatggcctgcgcccagacgggctctggaaagacggcggctttccttctacctatc
ttgagtcagatctacacggatggtccaggtgaggccttgagggccatgaaggagaatgga
aagtatgggcgtcgcaagcagtatccaatctccctggtcttggctccgaccagagaattg
gcagtgcagatctatgaggaggctaggaaattctcataccggtctcgagttcggccttgt
gtggtctacggtggagctgatattgggcagcagattcgagacttggaacgtggctgtcac
ttgttagtagccactccaggacggctggtagatatgatggagagaggaaagatcggactg
gacttctgcaaatacttggtgttagatgaagcggatcggatgttggacatgggctttgag
cctcagatacggagaatagttgagcaagacaccatgcctcccaaaggtgtccgccacact
atgatgtttagtgctacttttcctaaggaaatacagatgctggctcgggatttcttggat
gaatatatctttctggccgtaggaagagttgggtctacttctgagaacatcacacagaaa
gtcgtgtgggtagaagaagcagacaagcggtcatttcttcttgacctcctgaacgcgaca
ggcaaggattccctgatattggtgtttgtggagaccaaaaagggcgcagattctctagag
gacttcttataccacgaaggatatgcttgtaccagtatccatggagaccgatctcagcga
gatagagaagaggcccttcaccaattccggtcaggaaaaagtccaattctcgtggctaca
gcagtagcagcaagaggactggatatttccaatgtgaaacacgtcatcaatttcgacttg
cctagtgacatcgaagaatatgtgcatcgcattggccgtacaggtcgtgtcggaaacctt
ggccttgccacttcattcttcaatgagaggaacataaatattaccaaagatttattggat
cttcttgttgaagcaaaacaagaagtgccatcttggctagaaaacatggcttttgaacac
cattacaagggtggcagtcgtggacggtcaaagagcagatttagtggaggatttggtgct
agagactatcgacaaagtagcggtgccagcagttccagcttcagcagtggccgtgctagc
aacagtcgcagtggtggaggcagccatggcagcagcagagggtttggtggaggtagctat
ggaggcttttacaacagtgatggatatggaggaaattatagctcccagggggttgactgg
tggggtaactga
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