Apodemus sylvaticus (European woodmouse): 127697639
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Entry
127697639 CDS
T10613
Symbol
Copb1
Name
(RefSeq) coatomer subunit beta
KO
K17301
coatomer subunit beta
Organism
asyl Apodemus sylvaticus (European woodmouse)
Brite
KEGG Orthology (KO) [BR:
asyl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
asyl04131
]
127697639 (Copb1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
asyl04147
]
127697639 (Copb1)
Membrane trafficking [BR:
asyl04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
127697639 (Copb1)
Exosome [BR:
asyl04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
127697639 (Copb1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adaptin_N
Coatomer_b_Cpla
Coatamer_beta_C
HEAT
HEAT_2
Cnd1
HEAT_EZ
Arm
Coatomer_g_Cpla
MMS19_N
CRAL_TRIO_2
AP4E_app_platf
Motif
Other DBs
NCBI-GeneID:
127697639
NCBI-ProteinID:
XP_052056880
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Position
1:91751485..91787827
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AA seq
953 aa
AA seq
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MTAAENVCYTLINVPMDSEPPSEISLKNDLEKGDVKSKTEALKKVIIMILNGEKLPGLLM
TIIRFVLPLQDHTIKKLLLVFWEIVPKTTPDGRLLHEMILVCDAYRKDLQHPNEFIRGST
LRFLCKLKEAELLEPLMPAIRACLEHRHSYVRRNAVLAIYTIYRNFEHLIPDAPELIHDF
LVNEKDASCKRNAFMMLIHADQDRALDYLSTCIDQVQTFGDILQLVIVELIYKVCHANPS
ERARFIRCIYNLLQSSSPAVKYEAAGTLVTLSSAPTAIKAAAQCYIDLIIKESDNNVKLI
VLDRLVELKEHPAHERVLQDLVMDILRVLSTPDLEVRKKTLQLALDLVSSRNVEELVIVL
KKEVIKTNNVSEHEDTDKYRQLLVRTLHSCSVRFPDMAANVIPVLMEFLSDNNEAAAADV
LEFVREAIQRFDNLRMLIVEKMLEVFHAIKSVKIYRGALWILGEYCSTKEDIQSVMTEVR
RSLGEIPIVESEIKKEAGEIKPEEEITVGPVQKLVTEMGTYATQSALSSSRPTKKEEDRP
PLRGFLLDGDFFVAASLATTLTKIALRYVALVQEKKKQNSFVAEAMLLMATILHLGKSSL
PKKPITDDDVDRISLCLKVLSECSPLMNDIFNKECRQSLSQMLSAKLEEEKLSQKKESEK
RNVTVQPDDPISFMQLTAKNEMNCKEDQFQLSLLAAMGNTQRKEAADPLASKLNKVTQLT
GFSDPVYAEAYVHVNQYDIVLDVLVVNQTSDTLQNCTLELATLGDLKLVEKPSPLTLAPH
DFANIKANVKVASTENGIIFGNIVYDVSGAASDRNCVVLSDIHIDIMDYIQPATCTDAEF
RQMWAEFEWENKVTVNTNMTDLNDYLQHILKSTNMKCLTPEKALSGYCGFMAANLYARSI
FGEDALANVSIEKPVHQGPDAAVTGHIRIRAKSQGMALSLGDKINLSQKKTSL
NT seq
2862 nt
NT seq
+upstream
nt +downstream
nt
atgacggcagctgagaacgtgtgctatacgttaattaacgtgccaatggattcagaaccc
ccttctgaaatcagcttaaaaaatgacctggagaaaggtgatgtaaagtcaaagactgaa
gctttgaagaaagtgatcattatgattctgaatggggaaaagcttcccggactcctgatg
acgatcattcgctttgtgctgcctcttcaggatcataccatcaaaaagttgcttctggtc
ttctgggagattgttcctaaaacaactccagatgggaggctcttacatgaaatgattctt
gtgtgcgatgcatacagaaaggacctccagcatcctaatgagtttattcgtggatctact
cttcgtttcctctgcaaattgaaggaagcagaattgctggaacctttaatgcctgctatc
cgcgcttgtttggaacatcgtcacagctatgttaggagaaacgctgttttggccatctat
accatctacagaaattttgaacatcttatacctgatgctcctgagctgatacatgatttt
ctggtaaatgagaaggatgcaagctgcaaaagaaatgcatttatgatgctaattcatgca
gatcaggatcgagctttggattatttaagtacatgtattgatcaagttcagacatttgga
gacattctacagttggttattgttgaactaatttataaggtctgtcatgctaatccatca
gaaagggcccgtttcatccgctgtatctataacttactgcagtcatctagtcctgctgtg
aaatacgaagctgctgggacattggtaacactgtcaagtgcaccaactgcaataaaggct
gctgctcagtgttacattgatttaattattaaagagagtgataacaatgtaaagctcatc
gtcctggacagattggtggagttaaaagagcatcctgctcatgaacgagtcctccaggat
ctggtcatggacattcttagagtactgagtacaccagacttagaagtgcgtaagaaaacg
ctgcagttagcactggatcttgtctcatctaggaatgttgaagagttggttattgtcttg
aagaaggaagtaattaaaacaaataatgtgtctgaacatgaagacactgacaaataccga
cagctccttgtgcgaacactgcattcctgctctgtccgctttccagatatggctgcaaat
gttattcctgtgttaatggaatttctcagcgacaataatgaagcagctgctgctgatgtc
ttggagtttgttcgtgaagccattcagcgcttcgacaacttgagaatgctgattgttgag
aagatgctggaagtcttccatgctattaagtctgtcaagatttatcgaggagcattgtgg
atcctgggagagtactgcagtacaaaggaagacattcagagtgtaatgactgaggttcgc
aggtcccttggggagatcccaattgtagaatcagaaataaagaaagaagctggcgagata
aaaccagaagaagaaataactgttgggcccgttcagaaattggttacagaaatgggcacc
tatgccactcagagtgcactcagcagttctagacctaccaagaaagaagaagacaggcca
cccttgagagggttcctcctggatggagatttctttgttgctgcctcccttgccacaact
ctaaccaagattgcattacgctatgtagcgttggttcaggagaagaaaaagcaaaactct
tttgtcgctgaggctatgttgcttatggcaactatccttcatttgggaaaatcctctctt
cctaagaagccaattactgatgatgatgtagaccgaatttccctgtgcctcaaggtcttg
tctgaatgctcacctttaatgaatgacatttttaataaggagtgcagacagtctctttcc
caaatgttgtctgccaaactcgaagaagagaaactatcccaaaagaaagaatctgaaaag
aggaatgtaacagtacagcctgatgaccccatttccttcatgcaactaactgctaagaat
gaaatgaactgcaaggaagatcagttccagctgagtttgttggcagcaatgggtaatact
cagaggaaagaggcagcagatcccctagcatccaaacttaacaaggtcactcagttgaca
ggtttctctgatccagtgtatgcagaagcttatgttcatgtcaatcagtatgatattgtc
ctggatgttcttgttgtaaaccaaaccagtgatactttgcagaattgcacattagagtta
gctactctaggggatctgaaacttgtggaaaaaccatctcctttgactcttgctcctcat
gactttgcaaatattaaagctaatgtcaaggtagcatcaacagagaatggaataattttt
ggcaatatagtgtatgatgtctctggagcagcaagtgacagaaactgcgtggtcctcagt
gacatccacattgacatcatggactacatccagcctgcaacctgtactgatgctgagttc
cgtcagatgtgggccgaatttgagtgggaaaataaagtaacagtcaacaccaacatgact
gacctgaatgactatttacagcacatcctcaagtcaaccaacatgaagtgcctgactcca
gagaaggccctttctggctactgtggcttcatggcagccaacctatatgctcgttctata
tttggagaggatgcacttgcaaatgtcagcattgagaagccagttcaccagggaccagat
gccgccgttactggccacataagaattcgtgcaaaaagtcagggaatggccttgagcctt
ggagataaaatcaacctgtctcaaaagaagactagtctttaa
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