Apodemus sylvaticus (European woodmouse): 127697736
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Entry
127697736 CDS
T10613
Symbol
Bmal1
Name
(RefSeq) basic helix-loop-helix ARNT-like protein 1 isoform X1
KO
K02296
aryl hydrocarbon receptor nuclear translocator-like protein 1
Organism
asyl Apodemus sylvaticus (European woodmouse)
Pathway
asyl04710
Circadian rhythm
asyl04728
Dopaminergic synapse
Brite
KEGG Orthology (KO) [BR:
asyl00001
]
09150 Organismal Systems
09156 Nervous system
04728 Dopaminergic synapse
127697736 (Bmal1)
09159 Environmental adaptation
04710 Circadian rhythm
127697736 (Bmal1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
asyl03000
]
127697736 (Bmal1)
Transcription factors [BR:
asyl03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
127697736 (Bmal1)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PAS_11
PAS
PAS_3
HLH
PAS_9
Per3-like_PAS-A
PAS_4
PAS_2
bHLH_INO2
bHLH_NCOA
bHLH_NPAS4
PAS_8
Motif
Other DBs
NCBI-GeneID:
127697736
NCBI-ProteinID:
XP_052056992
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Position
1:complement(92726858..92832089)
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AA seq
631 aa
AA seq
DB search
MADQRMDISSTISDFMSPGPTDLLSGSLGTSGVDCNRKRKGSATDYQESMDTDKDDPHGR
LEYAEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQ
HMKTLRGATNPYTEANYKPTFLSDDELKHLILRAADGFLFVVGCDRGKILFVSESVFKIL
NYSQNDLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVKTDITPGPSRLC
SGARRSFFCRMKCNRPSVKVEDKDFASTCSKKKADRKSFCTIHSTGYLKSWPPTKMGLDE
DNEADHEGCNLSCLVAIGRLHSHMVPQPVNGQIRVKSMEYVSRHAIDGKFVFVDQRATAI
LAYLPQELLGTSCYEYFHQDDIGHLAECHRQVLQTREKITTNCYKFKIKDGSFITLRSRW
FSFMNPWTKEVEYIVSTNTVVLANVLEGGDPTFPQLTASPHSMDSMLPSGEDSFVVGGPK
RTHPTVPGIPGGTRAGAGKIGRMIAEEIMEIHRIRGSSPSSCGSSPLNITSTPPPDASSP
GGKKILNGGTPDIPSTGLLPGQAQETPGYPYSDSSSILGENPHIGIDMIDNDQGSSSPSN
DEAAMAVIMSLLEADAGLGGPVDFSDLPWPL
NT seq
1896 nt
NT seq
+upstream
nt +downstream
nt
atggcggaccagagaatggacatttcctcaacaatcagtgacttcatgtctccgggtccc
accgacctgctttccggttccctgggcaccagtggtgtggactgcaatcgcaagaggaaa
ggcagtgccactgactaccaagaaagtatggacacagacaaagacgaccctcatggaagg
ttagaatatgcagaacaccaaggaaggatcaagaatgcaagggaggcccacagtcagatt
gaaaagaggcgtcgggacaaaatgaacagtttcattgacgaattggcctctttggtacca
acatgcaatgcaatgtccaggaagttagataaactcaccgtgctgcggatggctgttcag
cacatgaaaacgttgagaggtgccaccaacccatacacagaagcaaactacaagccaaca
tttctatctgatgacgaactgaaacacctaattctcagggcagcagatggatttttgttt
gtcgtaggatgtgaccgagggaagatcctctttgtctccgagtctgtcttcaagatcctc
aattatagccagaatgaccttattggccagagtttgtttgactacctgcatccaaaagat
attgccaaagttaaggagcagctatcttcctcggacactgcaccccgggagcgactcatt
gacgcaaagactggacttccggttaaaacggacataacccctgggccctcccgactgtgc
tcgggagctcgccgctctttcttctgtaggatgaagtgcaacaggccttcagtaaaggtg
gaagacaaggacttcgcctccacctgttcaaagaaaaaagcagatcgaaaaagcttctgc
acgatccacagcacaggctatctgaagagctggccgcccaccaagatggggctggacgaa
gacaacgaggccgaccacgagggctgcaacctcagctgcctggtggcgatcgggcggctg
cactcgcacatggtcccacagccggtgaacgggcagatccgggtgaagtcaatggagtac
gtctctcggcacgcaatagacgggaaatttgtgtttgtagatcagagggcaacagctatt
ttggcatatctaccacaggaacttctaggtacatcatgttatgagtattttcatcaagat
gacataggacatcttgcagaatgtcacaggcaagttttacagacaagagagaagatcaca
actaattgctataagtttaagatcaaagatggttcctttatcacactacgaagtcgatgg
ttcagtttcatgaacccgtggaccaaggaagtagaatacattgtctcaaccaacactgtt
gttttagccaatgtcctggaaggcggggacccaaccttcccgcagctaacagcatccccc
cacagcatggacagcatgctgccctctggagaagattcctttgttgtaggtggcccaaag
aggactcatcccactgttccaggcattccagggggaaccagagctggagcaggaaaaata
ggtcgaatgattgccgaggaaatcatggaaatccacaggataagagggtcatcgccttcc
agctgtggctccagcccactgaacatcacaagtacgcctccccctgatgcctcgtctcca
ggagggaagaagattctaaatggagggactccagacattccttccactggcctactacca
gggcaggctcaggagaccccaggctatccctattctgatagttcttctattcttggtgag
aacccccacataggcatcgatatgatagacaacgaccaaggatcaagtagtcccagtaac
gatgaggcagcaatggctgtcatcatgagtctcttggaagcagatgcggggttgggtggt
cccgttgactttagtgacttgccatggccgctgtag
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