Apodemus sylvaticus (European woodmouse): 127698100
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Entry
127698100 CDS
T10613
Symbol
Hars1
Name
(RefSeq) histidine--tRNA ligase, cytoplasmic
KO
K01892
histidyl-tRNA synthetase [EC:
6.1.1.21
]
Organism
asyl Apodemus sylvaticus (European woodmouse)
Pathway
asyl00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
asyl00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
127698100 (Hars1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
asyl01007
]
127698100 (Hars1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
asyl03016
]
127698100 (Hars1)
Enzymes [BR:
asyl01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.21 histidine---tRNA ligase
127698100 (Hars1)
Amino acid related enzymes [BR:
asyl01007
]
Aminoacyl-tRNA synthetase
Class II (A)
127698100 (Hars1)
Transfer RNA biogenesis [BR:
asyl03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
127698100 (Hars1)
Prokaryotic type
127698100 (Hars1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_His
HGTP_anticodon
HGTP_anticodon2
WHEP-TRS
HHH_3
tRNA-synt_2
Sugarporin_N
tRNA-synt_2d
Virul_Fac
Motif
Other DBs
NCBI-GeneID:
127698100
NCBI-ProteinID:
XP_052057313
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All DBs
Position
13:69219834..69236440
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AA seq
509 aa
AA seq
DB search
MADRAALEELVRLQGAHVRGLKEQKASAEQIEEEVTKLLKLKAQLGHDEGKQKFVLKTPK
GTRDYSPRQMAVREKVFDVIIRCFKRHGAEVIDTPVFELKETLTGKYGEDSKLIYDLKDQ
GGELLSLRYDLTVPFARYLAMNKLTNIKRYHIAKVYRRDNPAMTRGRYREFYQCDFDIAG
QFDPMIPDAECLKIMCEILSSLQIGNFLVKVNDRRILDGMFAVCGVPDSKFRTICSSVDK
LDKVSWEEVKNEMVGEKGLAPEVADRIGDYVQQHGGVSLVEQLLQDPKLSQNKQAVEGLG
DLKLLFEYLTLFGIDDKISFDLSLARGLDYYTGVIYEAVLLQTPTQDGEEPLGVGSIAAG
GRYDGLVGMFDPKGRKVPCVGLSIGVERIFSIVEQRLEALEEKVRTTETQVLVASAQKKL
LEERLKLVSELWDAGIKAELLYKKNPKLLNQLQYCEEAGIPLVAIVGEQELKDGVIKLRS
VASREEVDVRREDLVEEIRRRTDQPPSIC
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atggcagatcgtgctgcgctggaggagctggtgcgactccagggagctcatgtgaggggc
cttaaggagcagaaagcgtccgctgagcagatcgaggaggaggtgacgaaactcctaaaa
ctgaaggcacagctgggccatgatgaaggcaaacagaagtttgtgctcaaaacccccaag
ggcacgagggactatagtccccggcagatggcagtccgggaaaaggtgtttgacgtcatc
atccgctgtttcaaacggcatggagcagaagtgattgatacacctgtgtttgaactaaag
gaaacacttactggaaagtatggagaagactcaaagcttatctatgacctgaaggaccag
ggtggggagctgctgtccctccgttatgaccttactgtcccttttgctcggtatctggca
atgaataaactgaccaacattaaacgctaccacatagcaaaggtgtatcgccgggacaac
ccagctatgacccgaggccgttaccgtgaattctatcagtgtgattttgacattgctggc
cagttcgaccccatgattcctgatgcagagtgcctaaagattatgtgtgagatcctgagt
tcacttcagattggcaacttcctggtcaaggtaaacgacaggcgcatcctggatgggatg
tttgctgtctgtggtgttcctgatagcaagttccgtaccatctgctcctcagtggacaaa
ctagacaaggtttcctgggaggaagtgaagaatgagatggtgggagagaagggccttgca
cccgaagtggctgatcgcatcggggactatgtccagcagcatggtggggtgtctttggtg
gagcagttacttcaggatcctaaactctcccaaaacaaacaggctgtagagggcttggga
gacctaaagctgctctttgaatatctaaccctgtttggcattgatgacaagatctccttt
gacctgagccttgctcgagggctggactattatactggggtcatctatgaggcggtgctg
ctacagacgccaacccaagatggggaagagcccctgggtgtgggtagtatagccgctgga
gggcgctatgacgggctggtaggcatgtttgaccccaaagggcgcaaggtgccgtgcgtt
gggctcagtattggagtggaacggatcttctccattgtagagcaaagattagaggctcta
gaggaaaaggtacggaccacagagacgcaggtacttgtggcatctgcacagaagaagctg
ctggaggagagactgaagcttgtctcagagttatgggacgctgggatcaaggccgagctg
ctgtacaagaagaacccaaagttgctgaaccagctgcagtactgtgaggaagcaggcatc
cccctggtggccatcgtcggggagcaggagctcaaggacggggtcatcaagctccgctcg
gtggccagcagagaagaggtggatgtccgaagagaagaccttgtggaggaaatcagaaga
agaacagatcagcccccctccatctgctga
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