Acetobacter senegalensis: ASN_1023
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Entry
ASN_1023 CDS
T04217
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
asz
Acetobacter senegalensis
Pathway
asz03410
Base excision repair
asz03430
Mismatch repair
asz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
asz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
ASN_1023 (recJ)
03430 Mismatch repair
ASN_1023 (recJ)
03440 Homologous recombination
ASN_1023 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
asz03400
]
ASN_1023 (recJ)
DNA repair and recombination proteins [BR:
asz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
ASN_1023 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
ASN_1023 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
ASN_1023 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecJ_OB
DHHA1
DHH
Motif
Other DBs
NCBI-ProteinID:
CEF40414
UniProt:
A0A0U4Y0L1
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All DBs
Position
I:complement(945503..947344)
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AA seq
613 aa
AA seq
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MTAFSETTMLLPPDDAAPPQARAALGVEASLTGRRWMWRPGADSPDLMRLGAAIAQRAGL
PEIVGRLLALRGLSLETAADFLDPKLRALMPNPSELRDMDVAAARMAQAVQKGETIGIFG
DYDVDGACASGILASFFEELGCAVHTHIPDRMTEGYGPNVPALEGLVAQGASLLVCVDCG
TAASDILNQMAGKADLVVLDHHKSEDALPAILATVNPNRPDCTSGLGHVCAAALAFLAAV
ATARDLRGAGWFEAHPAPDLMRQLDLVALATVCDVMPLQGLNRAFVAQGLKIMARRQRTG
LAALMEIAGVTKAPDAFSCGFAIGPRINAGGRIAEAALGLRLLRSEDAHEAKIMAERLDA
VNRRRQGVEADILDLAMQQAAAQREAGHPVILLTGKDWHPGVVGIVAGRIKEQFNRPALV
GAAQDDGSIKGSGRSVPGLDLGTVIIAARQAGLLTTGGGHAMAAGFSLPAEKVDAFHTFL
DERLAGAAQLPDAVDLEIDAALSVAGATVELAQNMASLAPFGAGNAEPLVALSHVQIIKA
DRIGRDGNTLRLLLKGADGGRLKALLFRAGDSPLAATLEDTTRPPIHLAGYLRAESWNGR
TDVTFFIQDAALV
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atgactgctttttcagagacaaccatgcttctgccccctgatgacgccgcgcccccgcag
gcccgcgccgcgctgggggtggaggccagcctgacaggccgccgctggatgtggcggccg
ggggctgacagcccggacctgatgcggctgggcgcagccattgcccaacgggccgggctg
cctgaaattgtaggccgccttctggcattgcggggcctttctcttgaaaccgccgcagat
tttctggacccgaagctacgggcactgatgcccaatccgtccgaactgcgggatatggat
gtggcagccgcccgcatggctcaggccgtgcaaaaaggcgagaccatcggtatttttggc
gattatgacgtagatggcgcctgcgcctccggcattctggcttctttttttgaagaactg
ggctgtgcggtgcacacccatattcctgaccgcatgaccgaaggctacggccccaatgtg
cccgcccttgaagggctggtggcgcagggggcctcgctgcttgtgtgcgtggattgcggc
actgcggcctctgatattctgaaccagatggcgggcaaggcagatctggtggtgctggac
caccataaatccgaagatgcgctgcctgccattctggcgaccgtaaaccccaaccggccg
gactgcacatctggccttgggcatgtgtgcgctgccgcactggcctttctggccgccgtt
gccactgcacgcgatctgcgcggcgcaggctggtttgaagcgcaccccgcgccagacctg
atgcgccagcttgatctggtggcgcttgcaacggtgtgtgatgtcatgcccctgcaaggg
ctgaatcgggcttttgtggcgcagggcctcaagatcatggcgcgtcgccagcgcaccggc
ttggccgcgctgatggaaattgcgggtgtcaccaaagcgccagatgcgttttcctgcggg
ttcgccatcgggccacgcatcaacgccgggggccgcattgccgaggcagcactgggcctg
cgcctgctacgcagtgaagatgcgcatgaagccaaaatcatggccgaacggctggatgcc
gtaaaccgccgccgccagggggtggaagcggacattcttgatctggccatgcagcaggcc
gccgcccagcgtgaagccgggcatcctgtcattctgctcacaggcaaggactggcacccc
ggtgtggtgggcattgtggcaggccgcatcaaggaacagttcaaccgcccggctcttgtg
ggcgctgcgcaggatgatggctccatcaaaggctctggccgttccgtgccggggcttgat
ctgggcacggtgattattgccgcacgtcaggccggactgctgacaacaggtggcggccac
gccatggcagccggtttctccctgcctgccgagaaagtggacgccttccacacttttctg
gatgaacggctggctggtgccgcgcaactgccggatgccgttgatctggaaattgacgcc
gctctctccgttgccggtgccacggtggaactggcacagaacatggcctctctcgccccg
tttggcgcgggcaatgccgagcctctggtcgctctctcgcatgtgcagattatcaaagcc
gaccgcattggccgagatggcaacacgctgcgtctgctgctgaaaggcgctgatggcggc
cgcctgaaagccctgctgttccgtgccggagacagcccactggccgccacgctggaagac
accacacgcccccccatccatctggcaggctatctacgcgccgaaagctggaatggccgc
acggatgtcaccttcttcattcaggatgctgcgttggtgtga
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